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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14000_c1_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_H/ACA_ribonucleoprotein_complex_subunit_4_[Amyelois_transitella]
Ontology
GO:0000495 P box H/ACA RNA 3'-end processing
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007281 P germ cell development
GO:0009267 P cellular response to starvation
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0031118 P rRNA pseudouridine synthesis
GO:0031120 P snRNA pseudouridine synthesis
GO:0031429 C box H/ACA snoRNP complex
GO:0035220 P wing disc development
GO:0042254 P ribosome biogenesis
GO:1990481 P mRNA pseudouridine synthesis
Transcript
Level		FPKM:4.13 TPM:4.16
ORF EntryO_BomoSK17320_5prime_partial:A_BomoSK_comp14000_c1_seq1
Sequence
(Nucleotide)
CCTTCTGCTACGAATATAATACTTATTTCATTAATCTTGTTTCTGTTAATTCAATATGAA
ATCTCCAACTTTTTACATTTATATATCCGATTATTGTATCACTGATAAATGTATGTCGAA
TTCAAAAAACGCAATTTCTTAATATAAGCTGTACAATGTTGTCTTTCAAATCTAAACGTA
ACTCAGTTTAAAATCTACAAACTGTTTGTTTTGCAACATCAAATTCATTCATCAACCTCT
TGTTTATCTTTCTTCTTTTTCTTTTTCTTCTCTTTGCGCACAGAATCATCTGCTGGTTGT
TCTGCTGTCTCTGGTGACTCCGATGTGTCCATAGTGGCGTCTGCTTCGGCAGGGGCTTCA
CTATCTCTCTTTTTCTTCTTCTTCTTCTTTTCCTGCTTCACCTCTATGGAGACATCGGGA
TCTTCTGCGTTAGCTGTGCTTGCCGTTCGCTTTCTGCTGCCTTCCTCGACACCGTCACCG
TTCTCCGGTTCTTTCTTAACATTATAGTTGACGTAACTGTTTAACCATTCTTTTGGTGTG
TTCTCATTTGGTTTGCCATATTTGTCAAGTTTCCCTTGTTGTATGAGGATTTTTTTCTGT
GAGGCTTTCGGTCCGAGACCCCATTTTCTGGGGTACGTGTCTCGTTCCATTATGACACGC
TTGAGTTTCGCGGCTACACCATGATCGCATGAGGCCATCGTAGACGTGGTCATCAGAGCA
ACGGCCAACGCTACTGCCTCACCTTTAGTGGTGACTATTACGATTTCTTGGTCAACTTCG
ATGCCGTCTTCGTATCTTAAAATACCTGGTAACAGCACTTTAGCACCGTAGCAAACAGCA
TTAACGGCGCTATCTTTGATAAATATCCTTTTGTGAGCAATCAGGAGGCCTTCCAGAGGT
TTGATTACTCGACGAAGGTAAGTCTCGTCTTTGTGGTTTTCATACGACCATTGTGCATCT
AGGATGTCGTGCATCGTGACCATGCCTTCCTTCTCGCCCTGAATGCCGGACCGTACTCGT
CTGAGTTCGATCATCTGACCTCCGACGCCAAGCATCAGACCTAAATGCACACACATCGTC
CGGATATACGATCCAGCCTCGCAACTAACCCAGAACACCCCAATATTCTTGTCCTGGTCG
AAATCCAGGAGTTTACTGTCGTACACCGTCCTGACACGCAGTTGTCGCTTCACG
(1194 bp)

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