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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13993_c1_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_DNA-directed_RNA_polymerase_I_subunit_RPA1_[Papilio_machaon]
Ontology
GO:0000183 P rDNA heterochromatin assembly
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.88 TPM:3.90
ORF EntryO_BomoSK17253_complete:A_BomoSK_comp13993_c1_seq1
Sequence
(Nucleotide)
CAACAATTCATATTTTGATTTCAATGATTACTATAAATCATATACACTTAATGGGCATAT
TTCATTATTAGCCTCGAAAAAAAAACCGATTAATTCGCCTTTAATTTATTTGCTAAGTCT
TCCGACCGAGGCTGCTGGATGAATGATGCGTATTCTGTTCTGTTATACTAAACTGTCAAC
TGTCAAAGTTGACACCTTCGACCGATGACGATGATATTAATTTATCTCTGATGGGAAAGG
CAAAGGACTTTAGTCCATACAGCCAGGCACCTTCGACCGATCGAAAAGCACGGTGAATGA
CGCGGCGGTCACGACTTAGACAGATTAACTTTGCCATACAAGTGCGAGTGCTGCAGATCG
AACACGCCGGTGCCGGTGCGACACAGCCGGCCGACCATCAGACAGCTAGAGGCGGACCGG
AGATCGTCTTTCTTAGAATTCAATATGGCGTCCTTCAAGAACAAAAGCGACGATTCGAAC
GACATTTGCTGTAACGGCGACGAAGACGCCTCCATTCCCTTCCGGCTCATAGGCTCAAAG
ATCCCGTTGTACGTCATGTAGTCGGCTATGAGGGTCAAGTGGCGCGGATCAACAGTGATA
CCGTAAACGTTAAATACGTTTTGTATCTCCTTTATGATGACTTTGTTGGCGGCTTCGATG
CCATACGTGTTGGCCATCGCGTGTATGTCGTTGCTGTACAGTCTGTTCATGTCCAGCAAA
TGATTGTATTTGAACATCTGCAATATGTTGATGCCTTCTGTTTTTAGATAGACGATGTCA
TTGTCTTTATGAGTGATCGCACGTTTTATGTGTTTGATTTCGTGGACGACAGACTTCATG
GCGGTTTCTCGTAGAGCTTGAGACAAATCTATTCTCAAAAATGAAATTGGGAATAGTACG
GTCAGTTCGCACCATTGGTGATTTTTTGTGTCGAATGTGTAATTAGTCGCGTTTCTGACG
CTACCAACGACATCGGAAATAATTTTGCTGGAATCAGCGTCATTTTCTTTTGGAGACTCT
TGACCTTCTTCGGACTCCTTCGCTTGATCATCGACGAGTTCCACTTCATCGTCAGATTTT
TCTTCCTCCTCTGATTCTGGGTCCTCGTATTCTTGCTCTTCTGTTCTTTTATTGCGAATC
TTGGCGGCTGTATTATCATCATCTTCATTAGGTGCTTCATCGTCTGAAGAGTCGAGATCG
TTGTTGGCCGTGTCTGTTGGCTCCGGGGCGTCGTCGCCGTCGTCCTCGTCGCTCTTGGCA
GCCCTGGCTCGCTGCTTCTTCTGTTCGGAGGCCCACATCACGCCGCACGTGGCCTTGGCG
TGCTTCCGCACCACCGTAAACATTTCATCGAAGAATTTATTTTGCATGTGTTTTATAATT
TGCGTCGGCTTCACAGCGTACTGCGTCTTATATTGTTTGTGGGGTAAGAATGTGAATTTC
ATGGTGGTCTTCAGTTGTCTCTCTGGTCTCACAACGATTTCGCATTGCACGTCAATCTTT
TCTAGAACGTCCGCTATAGTCACTCTGTTCAATTTCTGTCTCAGTTTCTCTGCTTTTTTT
GTCACGTCCGACACGTTTAGGAAAGGTATGTCCATGTTGGGAGTTTTAAGTTTCGCTGAT
GCAGTCATTAGGATCTCCCGCAGACGTGGTATTCCGAGGGTGACGTTCATGTCACCTCGA
CCGGCAAAATGGAAGGTGTTCAATGTCATCTGGGTCGAGGGCTCACCGATAGACTGGGCG
GCTAGCAATCCCACTGGCTCTCCGGGTGAAGCCATAGACTCCAAGAATTTAGCATTCATT
ACTTCAACGAACTTCTTTTTGTCTGTGTAAGATTCATAGAGACTATTAGATCTATTCTTA
AGGTAGTTTTGTATGATGTTGTCCAATTGTTCATTTATTACACCGAATTTAAATTGAGGC
GATTTGCTTGAAATAGGATCTGGACAGGGTTTCCTAATGTATTGTTGCTTCTCATCTTCG
TCCATTTCTCGCCATTTCTTCTCTAGTTCCCAGTAATACGGATCTCTTGTTCGGTCTGTT
GGAAGATCGTCTAGTTCGATTTCATTCCTGGCTAATACAGAGAATTGACTGAATCCACTA
ACGCGAACTTTTTGCAATGGATTGCCGTTTCTTTTCTTCCACTTCTTCAGAGACTTTTGC
AATTTTAAAACGTCATTTCCGTCGACGTTCTCTTTTAATTTTTTAATAACCGATTTGCTA
ACAACCGCGTTAGAATTTTTATCGAGAAATTCAAATTGGTCCTGCTTAAGGAACTGACAT
TTCAAAACATCAAGGCCGTCCTCTCCGTACGCAAACTGTATGATGCTGCTATCGGCATCG
CGGACCGTGTTGTCGTAAGCTACAGATATACTCTCTAAATGTTTTATCAAACATCTTTGT
AGGTAACCGGAACGACTGGTTTTCACTGCCGTATCAATAAGACCTTCACGTCCGGCCATG
CAATGGAAGAAGAACTCTTGGGGCTGGATCCCTGTCATAAAGCGGCCATCAATGAAGCCG
CCAGCTCGGGGAGACACATCGAAGGGAGGGAAACTTGGAAGTGATCTACCTGATATCATT
AGCGGAGGCCTTTTACCTTCCAATTCAATTTGCCCAAGTAAACATGAAATTTGCATAGTA
TTGACAGTAGAACCTTTGGCGCCAGACTGTACCATTAATTGTAAATTGTTATATGGAAAC
TTTTCAAGAAGACCTTCCGATAAACAAACTTTGTTTATGTTATTTGTGTAAGAATCGAGC
ATATTTTTATAATGTCTATCTAAATTGGACCTGAATTTGGGATCTTTTGCATTCATTTCT
GCAATTGTATCTTTTAGTTTTTTGTCATCAACATCCATCGGCAAGTCAGTAGCTTTTACC
GCTGCAACTTTACCAGATTTTCGAACCAAACAAATATAATTATCTCGCCTATCATCCGCC
TCTTTGACAACTAGAATATCTTTGACACCGAGAGTGAACCCCATCCATTGTAAATAAAAG
GTGAAGACTTTAGAAAAAGAACTCAATAATGCACTAGAGCATTCCCCACCATACAATTCA
TACATGCAGTGGACTAAGCCATAGGGTGTGGCTCCATAGTGAGTTTTATCTAGTACTCCA
CACAATAGTTCACCTTTTCTGATAATAACTTCAGCTTCAGTCATGGTATTCGGATTGGTA
AATGGGCTGCCACCGCCATTCCACTGTCTCGGTTCTTCTTTCTGCCAGGCTTTCGCACTG
ATTTTGGCTTTACCAGTTAACGAAAGGCATGGTTTCCCTTTAGGTATTGTGTTGATAATT
ATTGTAGATAGAACTTGTTTACCTGACCACAGTACAATAGGTTTCAGTATGGTAGGAGGT
AACAGCTGGATTTTACCTCTGTGATTTGAGAGAGCTTGAAATACCAACTGCTGGTAATCT
GACTTATTATAAAAAGTACCTCTAAGTGACATTTTTACACCAGATATAACATGATCTTGG
ATCAAACCGCTTAGAGGTGTGCCATCTTTAGGTACTAGATATTGCTTTGTAACAGACATT
ATGTTGTATGCTTCACTTCTTGCATTTTCGTCTTGTGGGAAATGGGCATTCATTTCGTCT
CCATCAAAGTCAGCATTGTACGATTTGCAGTTAGCATAGTGTAGTCGAAGGGTCTTCTCT
CCTTTTAATATCCTTGCTCGATGAGCCATCATACTGGGCTTATGTAAAGAAGGCTGCCGG
TTAAGGATCAAAATGTCACCATTCACCAAATGTCTGTGAACTGTCTTTAAGCCGGTGGTT
TTGTACTCATCAGGTGTCAGAAGGCGTTTTGCAAGACTTTTCCGTTTTTGTATAGAGTCA
GCAGGTATTCTAATTATTCTACCGTTCCCAATCTCTAATTTCTCTGCTCCTGGATGTTTA
TTGGGTCCATTGATTACCATTTTACGTAGCTCATCAACATTCCATTCCGTAACCGGGACG
GGATATGTTAGTTTTGTGGCAAAAGCATCTGGGATGCCTATTTCATCTATGTCGACATTG
GGATCTGGGGTAATGACAGATCTTGCAGCAAAATTCACTCTTTTGCCCATCATGTGCATC
CTTATTAAGCCAGTTTTCTTTTCCAGTATCTGTTTAAGACCTTGACTTGATGCTCCCATA
CCTTCACAATTCAGTAAATGATTAACACTCTTTTGTAGGTCCTGCCACGCAACATGTAAT
TTTTCAGCTGGTGTTTTACCTTGAACAGCCTCATATGCTTGTCTTGGTGCTGTATCTAAG
CAGTCTTGAGCCTTTTGTTGATTTGAGGCTGAGAGAACTTGTAAAATGACTCTAGCAGCA
TAGGAGTGTAACAATATGGCTTTATAAACATTAGTTTGAGGATGCTCAATCAGTTCTCCT
CTCAAGATATTGCAGGGTCTTACACACGGAGGTAACACAGGCACAATTTCCATGAAAAAT
ATATTTATTGCTGGACTAGCAGATGTATGTTTCAATACAGGGAAACAATATTTTAACAGA
TCTTCATCATTTTTTGAAATGTCCACACAAAATCGTCTGATTTCGTCTGGCATCAATATT
TTAATGCCTTTTGTTCCTGGTGTTGAACCTTCAGCACTCAAATTATACATTATTTTACCT
TCGGATGTATTAACTTTTATTAGTTTGGCCATACAAAACATACATTTTTTTACAATATTC
ATGCTCCTAAAATAGCCGGTTATTATTTTACTTCTAATTTTATCAGTGTTTTTACTGTGA
AATGTTTCCACAATTACATCTTTTGTTTTCAAAAGTTTTCTATACTTTCTTATAGTTTTA
TTTGGTTTGTCCGGAGACTCCTTACTACTGTATGTTTCACTTACATAGTAATCAAGGTCT
AAAGCTGCTGTTATATGCCCTGCATCTACTAGATCCAATTGCAGTTTCAATAGCGACTTT
AAGCGATCGTCAAGTTGTATTCTAAAACATTTGAGACAACTTATACGGAATAGCATGTAA
ATACTTTTTGTAAAGAGTGGATTAATTACCACGAGGGGCAGTTCGATGTGTCCAAAATGT
CCAGGGCAATGCAGTAACGAATTGTTACATGTCTCACAGTTATCGTTCCTGTCCCTTAGT
GGTCCTAGTGCAGAATCGTACAGGCCTCCCTTAGTAGGGTTACCGATGGCGTCAAACGAT
TGGATTTGTGTTATCTTTGTTACACTCAATTTTTTTATATCTTCATCAGTGAACATAAGA
AACTGTATGTGTTCGGGTTCGACGGAGGGCAACCCAGACGTTGATGATGGAAACGCCGAT
TTAAAAGCCATATTGTATTTATGTGAATAGCAAGACAGGTATATTCATAAGTTACTTTAT
ATCGTATCGATTTTCATATTTATTATCTTTGTTTATTTCCTATATTTTGAAATATATTGT
GAACCTAATTTCAACAAGGTCTATGATTTCAA
(5432 bp)

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