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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13984_c0_seq5
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735722_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
Transcript
Level		FPKM:5.06 TPM:5.09
ORF EntryO_BomoSK17206_complete:A_BomoSK_comp13984_c0_seq5
Sequence
(Nucleotide)
CGACACGGTCGAAGATATAACTTGTATTTTGATAATTTAAAACAATTAACGAGAATTGAA
AATAAAAATACAATCGACGGGTCCAAAGTTTAGTTTATTAACTTTAGTGTTGCATTACAA
AGTGAAATTCGCCTAGACGAGTTTGAAAGAAATTTATAACGCAAACTGCCACAGTACTAG
AAGTGATTAGAAAAGTCAAGTGAAAAATAAAAGTGAATAAACAAATTGAAATAAAAAAAA
AAAACTTTTTTGGCTCTATCCCAACTGACTCAGTAGTGTGCATCAAAATGTATACGTTTA
CGCTGAAATGGTACTTTTCGGGGCGAAAGTGACAAAGAACCAAGATGTCTCCCGATAAAC
GCAAAAGGAGGATCGGAGAGGAAATTCATTTTAGTAACAAAATAAGGACTCGTATATAAA
AGCCCCAAATATCATATACATATTATAAATAAATATATCTGATCTCAAAATATCTTAGTG
CTCAATATTAGTTTATTCTAATACAATTTTGATACATCGAAAATGATCGCCCTGAAGAAA
CTATATGGCGACGAGCTACTTCGCCTGGCTCTGGTTTTGAGTTTGCTCAGGATCGACCCA
GACGACTACCTCGAACGGGAGACCCAGTTGCTGGCCGGTCTGCACATCGCGAACGGTTCC
GACCTGTCCCCGGAACAGGAGGCCCGGACGCTGATACGGCCGAGGTTCGTCCACCCCAAG
TCCCTGGACAACATCCTCGTGAACTACGAGAGGCAGCTGTTTGAAGAGCTCAACTCCTTG
GGCCGGTACGGTCCAAGCGCACATAATGCCCGGATGTGGCAGAACCGTGGCCCGATTCTT
CATACATATTTATTGAACGATGTCGCAACTGGCGCAGTCGAACCCGTGTCAGCGGCCCAG
TCGGTCGCAACCGACCAGGACGCCGTCTCGGCGGACGACAACGTCGCCCAGGAGGTCAAA
GTGACCGACGAGGACGCCCAAGACCAAAGTCGCGAGTCCACGGTGACGGTGTCGGACAAC
TTCCTCCACAATCGCACCGAATCGGATATATTTCCGGAGATCGCTTCCAGAACCTTCGAC
GTGACCGAGTTCCTGGTGCAGCAGGACAATATGCAAATTAAAAAGGAACAGGACGAGGCT
TTCGACCTCAAGGTCAACGAATCGAACACCGATGACTTTTACAGTGACAACGCTATCGAC
TTTGCGACTTATTTTGCTGCAAGATCCGAGAAGATCGAGGTGGAGGAGCCTAATTTATAT
CACCAGAATATGGCCGACCTTCAAGATTATGGGGACGTCTTCACCGACGATCCGGACCTC
AAACACGACCTGGAACTAGACATAAAACAACAGCAGGAGAACTTGGAACAGTATCTCCTT
GAGAACACTCCTTTGGAAGCGGAGGTCTATGAATTGGCTCCAATGTTTGAAGAGGAACTG
GTGTTGGACGTTAAGAGGGAAAGAGCTAGCACTAGTTTCACGTCGGCCAGTTCGAGTGGC
GTGAGCGAGATGGACATATCCGACGTCAAAACCGAGCCGTTGGACTATAATGACGTCAAG
GTCGAGCCTGATGAGGGGAACCATACTGGAGATGAACTGACGCAAGAGGACATGGATCTC
ATCGAGGTGCTCTGGAAGCAGGACGTGGACATGGGATTCTCGCTCGAAGATCCAATACAG
CCGGAAGGTCCGCAAGCCACGAAGGTATTGGGGGAGGAAATCGACAAGGAACTGCTGAAG
GCCAAAGATAGGATCCAGAAGAACTATGAAGATGAAGAGCTGAAGAAGGTTGAGATAGAG
AAGGTCAAGGCTTCGTTGTTGGATCCCGAAGTCAAAGAGGATGATCCCTGGGCTGGCCTA
TCCTACACCGTCGACACGGAAACCGGCGAATACGTGATCCAAGGAGAACTGCCCAGGGAG
CTGGTGAGCGGCGAGGAGTCGCGCTTCGATTTGCTGGAGGAGGCGCTTCAGCTGGTGGAA
CTCGGAGACGGCGCTGAAGCCAAAGATGAACCCACTGAGGCGGTAGAAGGGAGTAGCACC
GATCGCAGGAGCACCATGTTGCACCCTGCCATGCGGCATGTCCCGCACCACCCCCTCGCC
CATTACCACAACCAGTCGTTGATGCGGTCGATGTCGGTGGAGCAACGCTGGCAGGACCTC
GCCTCTCTGCTGACCATCCCGCCGCCACCGGAGCAGTACCAACACTACCACCATCACCAC
CAGCACCCGCACAACATCAGCGCCCATGGAGCGGCCGGCTATGCTCCGAACTACCACGGA
CCTCACGGACCCCACGGACCTCACGGACCTCACGCTGCTCACGTGCCGCACGCGCCGCAC
GCACCCCTCCCGGCTCCGGTGGCCGATAAACATCCGGATGCGTACGTAGGGGCAACTGCT
CCCATAGAAGGGGGGTACAAAGTTGAGAGTACTCATCCCTCGCAACAGCAGGATGGAGTT
TATTATCAGAACACGCCCGCCGAGATGCCGGGGCCAGTCAACCAGGACGGCTTCCTCCAG
TCGATCCTCAACGACGAGGACCTGCAGCTGATGGATATGGCGATGAACGAAGGAATGTAC
ACAATGCGAATGCTGGACGGGGCGAGCTCCCACCACGGCCCCCACCACAACCACTCCCAC
ATGATGGTGCCAGAGCGTGATTCCGCATCAGACAGTGCCGTCTCCTCGATGGGCTCCGAA
CGCGTGCCTTCGCTTTCGGACGGCGAATGGTGCGACGGTAGCGATTCCGCCCAAGAGTTC
CACAGTTCCAAATTCCGCCCATTCGAAAGCTCTTACGGCAGAGAGCGCTCCGCCTCCCAC
CAGCCCCAGAAGAAGCACCACATGTTTGGGAAGAGATGCTTTCAGGAGCAGCCGCCGCCT
CCCATGGAGCCGGTGCAGACGCAGCGACCTACTCCCGTCAAGTACGAGTGTCCGGAGCAG
GCTTACCACCACGAGGGCCTGCACATGCACAACGATTTCGGAGGGCGGCACCAGGTCGCT
CCGCCCCACGTGGCGGGTCTGCAGCCGGCGTTAGAGCTGAACGCGCCCCACTCCAGCCAC
GCCCTGCTCCAGGGCGCCGTGGGGCCGGGGTTCGGAGTCCCGGAGCGCGTGCGGCACAAC
CACACGTACAGCGCGCCCCTCGCCGCGCCCCCGCACGCCCCCACCGTGCGCGACAAAAGG
GTTCGCCGACTCACCGACGGTAGCGCTTCGGACGGGGGCTCATCATGCACCAGCGCGCAG
CATCTGTCCCGAGACGAGAAACGGGCCAAGGCATTAGGTATCCCCCTCGAAGTCCAGGAC
ATCATTAATCTGCCCATGGACGAGTTCAACGAGAGACTGTCGAAGCACGACCTCAGCGAG
GCGCAGTTGTCGCTGATCCGGGACATCAGGAGGCGGGGCAAGAACAAAGTGGCAGCACAG
AACTGCCGGAAACGGAAACTGGACCAGATAACCTCGCTCGCGGACGAGGTCAGGACCGTC
CGGGACAGGAAGCTGAGGACCCAGAGGGACCACCACAGTCTGCTGGCCGAGAGGCAGAGG
CTCAAGGAGAGGTTTGCGGCCCTATACCGACACGTTTTCCAGAACCTCCGCGACCCCGAA
GGGAGGCCGCTGTCCTCGGGCCAGTACTCGCTGCAGCAGGCGGCTGACGGCAACGTGGTC
CTCGTGCCGAAGATGCCTCAACACCAAGATCACCCGATGAACAGGACTTCGGATGATGAG
ATGGAGAGGAAAGCCAAGCACTACGACCAGTGACACATGGCCGCGCTCCGCCGCGCCGCT
GCCTCCCAGCGAGGGGTCTACTCTTAAGTGCGGCCAGAATTATCTGACTGACAGAACTAT
CTAAAAGACACCTGCCAAAATTGACAGCTGTCAACCGTAGTATTAAGGCGCGGACGGGCA
AAGGGTAATTTAGTACATACGTCATTTTGTATATATAGATCGGTTTCGCGGGACGTATCG
CCGTCCCTCTCGCACCTACACCACCCTCCACCACTATTATTGGAAGCGTAGGTTTTTGAT
GCGACCTAATATCGACCTTAAGCATTAAGGCACAAGTAACAAATTGGTTTAACGTTGTAC
AATTAATTTTATGATTCGCTTCCTATTCATTTCTAATATAACATATTATTATGTGCTTAA
AAAAAAGTCTGATTATTTTTATTGTTGATACCCACGTCATTATGAAATAGAAAAGTATTT
GAAAAACAGATGAGAAAATTTCATCATGCTTTATCTTCATCAGCTTATTACATTACACAA
TGTAAATTATATGCTCTCAATGATATTACTGCCAAATTAGATTTTGGGATGCAACCTTTG
TTTGTTGAAATTATTATGCGAGGGAAAGGGATGGCGATATAAGTCTTATTCATTCGGTAA
ATTCCGACGATTTTAGTATACATATTAAATTGAGCTTTGTGTGCGAGCAACACGGGTTGT
ATTTGTAGCAGAAGCGATGCACGGCGCAATGCAATACAAACTCGACTGACGGGGTGAACG
ACCTCATAGGATTCGCTTTTCATTGCGCGTTAACTAACCGCTATAGTCTCCCTGAACTGT
ATATGTCAGGGGCGCACGAACTATTTAAAGGCGAAAGGCCTATTTAATTTAAGGGACAGT
TTTGCAACATCACAGAAGAGTCATTTAAAGATTAAAAATTTGGAAAAAATATCATAAC
(4678 bp)

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