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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13984_c0_seq4
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735722_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
Transcript
Level		FPKM:0.63 TPM:0.64
ORF EntryO_BomoSK17201_complete:A_BomoSK_comp13984_c0_seq4
Sequence
(Nucleotide)
AGACAAAAAGGCCTCTTGAGTGTTGTAACGAACTTTGACAATATTATCCGTCTGATTCCG
TCTATTCGCAGAAATAGTGTTGCGCGTGTTCTATGAGGATCGATTTAGATAATCGATTTT
CGTTTTGATTCGGCCAATACGAGTATTGCGAATAACCTGTAAAAATCGTGGCCCGAAATG
TTAGAAGAAATTATGCCAACGATGAGGAGTCTTAGTCCAGATCCGGAAGACATAGGTGTG
ATAACAAGAAAAAACACAATCCAGGACATGGATCTCATCGAGGTGCTCTGGAAGCAGGAC
GTGGACATGGGATTCTCGCTCGAAGATCCAATACAGCCGGAAGGTCCGCAAGCCACGAAG
GTATTGGGGGAGGAAATCGACAAGGAACTGCTGAAGGCCAAAGATAGGATCCAGAAGAAC
TATGAAGATGAAGAGCTGAAGAAGGTTGAGATAGAGAAGGTCAAGGCTTCGTTGTTGGAT
CCCGAAGTCAAAGAGGATGATCCCTGGGCTGGCCTATCCTACACCGTCGACACGGAAACC
GGCGAATACGTGATCCAAGGAGAACTGCCCAGGGAGCTGGTGAGCGGCGAGGAGTCGCGC
TTCGATTTGCTGGAGGAGGCGCTTCAGCTGGTGGAACTCGGAGACGGCGCTGAAGCCAAA
GATGAACCCACTGAGGCGGTAGAAGGGAGTAGCACCGATCGCAGGAGCACCATGTTGCAC
CCTGCCATGCGGCATGTCCCGCACCACCCCCTCGCCCATTACCACAACCAGTCGTTGATG
CGGTCGATGTCGGTGGAGCAACGCTGGCAGGACCTCGCCTCTCTGCTGACCATCCCGCCG
CCACCGGAGCAGTACCAACACTACCACCATCACCACCAGCACCCGCACAACATCAGCGCC
CATGGAGCGGCCGGCTATGCTCCGAACTACCACGGACCTCACGGACCCCACGGACCTCAC
GGACCTCACGCTGCTCACGTGCCGCACGCGCCGCACGCACCCCTCCCGGCTCCGGTGGCC
GATAAACATCCGGATGCGTACGTAGGGGCAACTGCTCCCATAGAAGGGGGGTACAAAGTT
GAGAGTACTCATCCCTCGCAACAGCAGGATGGAGTTTATTATCAGAACACGCCCGCCGAG
ATGCCGGGGCCAGTCAACCAGGACGGCTTCCTCCAGTCGATCCTCAACGACGAGGACCTG
CAGCTGATGGATATGGCGATGAACGAAGGAATGTACACAATGCGAATGCTGGACGGGGCG
AGCTCCCACCACGGCCCCCACCACAACCACTCCCACATGATGGTGCCAGAGCGTGATTCC
GCATCAGACAGTGCCGTCTCCTCGATGGGCTCCGAACGCGTGCCTTCGCTTTCGGACGGC
GAATGGTGCGACGGTAGCGATTCCGCCCAAGAGTTCCACAGTTCCAAATTCCGCCCATTC
GAAAGCTCTTACGGCAGAGAGCGCTCCGCCTCCCACCAGCCCCAGAAGAAGCACCACATG
TTTGGGAAGAGATGCTTTCAGGAGCAGCCGCCGCCTCCCATGGAGCCGGTGCAGACGCAG
CGACCTACTCCCGTCAAGTACGAGTGTCCGGAGCAGGCTTACCACCACGAGGGCCTGCAC
ATGCACAACGATTTCGGAGGGCGGCACCAGGTCGCTCCGCCCCACGTGGCGGGTCTGCAG
CCGGCGTTAGAGCTGAACGCGCCCCACTCCAGCCACGCCCTGCTCCAGGGCGCCGTGGGG
CCGGGGTTCGGAGTCCCGGAGCGCGTGCGGCACAACCACACGTACAGCGCGCCCCTCGCC
GCGCCCCCGCACGCCCCCACCGTGCGCGACAAAAGGGTTCGCCGACTCACCGACGGTAGC
GCTTCGGACGGGGGCTCATCATGCACCAGCGCGCAGCATCTGTCCCGAGACGAGAAACGG
GCCAAGGCATTAGGTATCCCCCTCGAAGTCCAGGACATCATTAATCTGCCCATGGACGAG
TTCAACGAGAGACTGTCGAAGCACGACCTCAGCGAGGCGCAGTTGTCGCTGATCCGGGAC
ATCAGGAGGCGGGGCAAGAACAAAGTGGCAGCACAGAACTGCCGGAAACGGAAACTGGAC
CAGATAACCTCGCTCGCGGACGAGGTCAGGACCGTCCGGGACAGGAAGCTGAGGACCCAG
AGGGACCACCACAGTCTGCTGGCCGAGAGGCAGAGGCTCAAGGAGAGGTTTGCGGCCCTA
TACCGACACGTTTTCCAGAACCTCCGCGACCCCGAAGGGAGGCCGCTGTCCTCGGGCCAG
TACTCGCTGCAGCAGGCGGCTGACGGCAACGTGGTCCTCGTGCCGAAGATGCCTCAACAC
CAAGATCACCCGATGAACAGGACTTCGGATGATGAGATGGAGAGGAAAGCCAAGCACTAC
GACCAGTGACACATGGCCGCGCTCCGCCGCGCCGCTGCCTCCCAGCGAGGGGTCTACTCT
TAAGTGCGGCCAGAATTATCTGACTGACAGAACTATCTAAAAGACACCTGCCAAAATTGA
CAGCTGTCAACCGTAGTATTAAGGCGCGGACGGGCAAAGGGTAATTTAGTACATACGTCA
TTTTGTATATATAGATCGGTTTCGCGGGACGTATCGCCGTCCCTCTCGCACCTACACCAC
CCTCCACCACTATTATTGGAAGCGTAGGTTTTTGATGCGACCTAATATCGACCTTAAGCA
TTAAGGCACAAGTAACAAATTGGTTTAACGTTGTACAATTAATTTTATGATTCGCTTCCT
ATTCATTTCTAATATAACATATTATTATGTGCTTAAAAAAAAGTCTGATTATTTTTATTG
TTGATACCCACGTCATTATGAAATAGAAAAGTATTTGAAAAACAGATGAGAAAATTTCAT
CATGCTTTATCTTCATCAGCTTATTACATTACACAATGTAAATTATATGCTCTCAATGAT
ATTACTGCCAAATTAGATTTTGGGATGCAACCTTTGTTTGTTGAAATTATTATGCGAGGG
AAAGGGATGGCGATATAAGTCTTATTCATTCGGTAAATTCCGACGATTTTAGTATACATA
TTAAATTGAGCTTTGTGTGCGAGCAACACGGGTTGTATTTGTAGCAGAAGCGATGCACGG
CGCAATGCAATACAAACTCGACTGACGGGGTGAACGACCTCATAGGATTCGCTTTTCATT
GCGCGTTAACTAACCGCTATAGTCTCCCTGAACTGTATATGTCAGGGGCGCACGAACTAT
TTAAAGGCGAAAGGCCTATTTAATTTAAGGGACAGTTTTGCAACATCACAGAAGAGTCAT
TTAAAGATTAAAAATTTGGAAAAAATATCATAAC
(3334 bp)

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