SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13984_c0_seq2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735722_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
Transcript
Level		FPKM:2.18 TPM:2.19
ORF EntryO_BomoSK17195_complete:A_BomoSK_comp13984_c0_seq2
Sequence
(Nucleotide)
CGACACGGTCGAAGATATAACTTGTATTTTGATAATTTAAAACAATTAACGAGAATTGAA
AATAAAAATACAATCGACGGGTCCAAAGTTTAGTTTATTAACTTTAGTGTTGCATTACAA
AGTGAAATTCGCCTAGACGAGTGTACGTGAAGTTTTAAGTGTTTACGGAGACGAAATTAG
ACAGTGCTAGTTAATTATTACAGTGCTTTTTACCATTATTTCGTTTGTAACAAACCGCTT
TCGGAGGTAGCGGTCCGTAACCTCTATACGTACTGTGGCAGTCACTTGAAAGAAATTTAT
AACGCAAACTGCCACAGTACTAGAAGTGATTAGAAAAGTCAAGTGAAAAATAAAAGTGAA
TAAACAAATTGAAATAAAAAAAAAAAACTTTTTTGGCTCTATCCCAACTGACTCAGTAGT
GTGCATCAAAATGTATACGTTTACGCTGAAATGGTACTTTTCGGGGCGAAAGTGACAAAG
AACCAAGATGTCTCCCGATAAACGCAAAAGGAGGATCGGAGAGGAAATTCATTTTAGTAA
CAAAATAAGGACTCGTATATAAAAGCCCCAAATATCATATACATATTATAAATAAATATA
TCTGATCTCAAAATATCTTAGTGCTCAATATTAGTTTATTCTAATACAATTTTGATACAT
CGAAAATGATCGCCCTGAAGAAACTATATGGCGACGAGCTACTTCGCCTGGCTCTGGTTT
TGAGTTTGCTCAGGATCGACCCAGACGACTACCTCGAACGGGAGACCCAGTTGCTGGCCG
GTCTGCACATCGCGAACGGTTCCGACCTGTCCCCGGAACAGGAGGCCCGGACGCTGATAC
GGCCGAGGTTCGTCCACCCCAAGTCCCTGGACAACATCCTCGTGAACTACGAGAGGCAGC
TGTTTGAAGAGCTCAACTCCTTGGGCCGGTACGGTCCAAGCGCACATAATGCCCGGATGT
GGCAGAACCGTGGCCCGATTCTTCATACATATTTATTGAACGATGTCGCAACTGGCGCAG
TCGAACCCGTGTCAGCGGCCCAGTCGGTCGCAACCGACCAGGACGCCGTCTCGGCGGACG
ACAACGTCGCCCAGGAGGTCAAAGTGACCGACGAGGACGCCCAAGACCAAAGTCGCGAGT
CCACGGTGACGGTGTCGGACAACTTCCTCCACAATCGCACCGAATCGGATATATTTCCGG
AGATCGCTTCCAGAACCTTCGACGTGACCGAGTTCCTGGTGCAGCAGGACAATATGCAAA
TTAAAAAGGAACAGGACGAGGCTTTCGACCTCAAGGTCAACGAATCGAACACCGATGACT
TTTACAGTGACAACGCTATCGACTTTGCGACTTATTTTGCTGCAAGATCCGAGAAGATCG
AGGTGGAGGAGCCTAATTTATATCACCAGAATATGGCCGACCTTCAAGATTATGGGGACG
TCTTCACCGACGATCCGGACCTCAAACACGACCTGGAACTAGACATAAAACAACAGCAGG
AGAACTTGGAACAGTATCTCCTTGAGAACACTCCTTTGGAAGCGGAGGTCTATGAATTGG
CTCCAATGTTTGAAGAGGAACTGGTGTTGGACGTTAAGAGGGAAAGAGCTAGCACTAGTT
TCACGTCGGCCAGTTCGAGTGGCGTGAGCGAGATGGACATATCCGACGTCAAAACCGAGC
CGTTGGACTATAATGACGTCAAGGTCGAGCCTGATGAGGGGAACCATACTGGAGATGAAC
TGACGCAAGAGGACATGGATCTCATCGAGGTGCTCTGGAAGCAGGACGTGGACATGGGAT
TCTCGCTCGAAGATCCAATACAGCCGGAAGGTCCGCAAGCCACGAAGGTATTGGGGGAGG
AAATCGACAAGGAACTGCTGAAGGCCAAAGATAGGATCCAGAAGAACTATGAAGATGAAG
AGCTGAAGAAGGTTGAGATAGAGAAGGTCAAGGCTTCGTTGTTGGATCCCGAAGTCAAAG
AGGATGATCCCTGGGCTGGCCTATCCTACACCGTCGACACGGAAACCGGCGAATACGTGA
TCCAAGGAGAACTGCCCAGGGAGCTGGTGAGCGGCGAGGAGTCGCGCTTCGATTTGCTGG
AGGAGGCGCTTCAGCTGGTGGAACTCGGAGACGGCGCTGAAGCCAAAGATGAACCCACTG
AGGCGGTAGAAGGGAGTAGCACCGATCGCAGGAGCACCATGTTGCACCCTGCCATGCGGC
ATGTCCCGCACCACCCCCTCGCCCATTACCACAACCAGTCGTTGATGCGGTCGATGTCGG
TGGAGCAACGCTGGCAGGACCTCGCCTCTCTGCTGACCATCCCGCCGCCACCGGAGCAGT
ACCAACACTACCACCATCACCACCAGCACCCGCACAACATCAGCGCCCATGGAGCGGCCG
GCTATGCTCCGAACTACCACGGACCTCACGGACCCCACGGACCTCACGGACCTCACGCTG
CTCACGTGCCGCACGCGCCGCACGCACCCCTCCCGGCTCCGGTGGCCGATAAACATCCGG
ATGCGTACGTAGGGGCAACTGCTCCCATAGAAGGGGGGTACAAAGTTGAGAGTACTCATC
CCTCGCAACAGCAGGATGGAGTTTATTATCAGAACACGCCCGCCGAGATGCCGGGGCCAG
TCAACCAGGACGGCTTCCTCCAGTCGATCCTCAACGACGAGGACCTGCAGCTGATGGATA
TGGCGATGAACGAAGGAATGTACACAATGCGAATGCTGGACGGGGCGAGCTCCCACCACG
GCCCCCACCACAACCACTCCCACATGATGGTGCCAGAGCGTGATTCCGCATCAGACAGTG
CCGTCTCCTCGATGGGCTCCGAACGCGTGCCTTCGCTTTCGGACGGCGAATGGTGCGACG
GTAGCGATTCCGCCCAAGAGTTCCACAGTTCCAAATTCCGCCCATTCGAAAGCTCTTACG
GCAGAGAGCGCTCCGCCTCCCACCAGCCCCAGAAGAAGCACCACATGTTTGGGAAGAGAT
GCTTTCAGGAGCAGCCGCCGCCTCCCATGGAGCCGGTGCAGACGCAGCGACCTACTCCCG
TCAAGTACGAGTGTCCGGAGCAGGCTTACCACCACGAGGGCCTGCACATGCACAACGATT
TCGGAGGGCGGCACCAGGTCGCTCCGCCCCACGTGGCGGGTCTGCAGCCGGCGTTAGAGC
TGAACGCGCCCCACTCCAGCCACGCCCTGCTCCAGGGCGCCGTGGGGCCGGGGTTCGGAG
TCCCGGAGCGCGTGCGGCACAACCACACGTACAGCGCGCCCCTCGCCGCGCCCCCGCACG
CCCCCACCGTGCGCGACAAAAGGGTTCGCCGACTCACCGACGGTAGCGCTTCGGACGGGG
GCTCATCATGCACCAGCGCGCAGCATCTGTCCCGAGACGAGAAACGGGCCAAGGCATTAG
GTATCCCCCTCGAAGTCCAGGACATCATTAATCTGCCCATGGACGAGTTCAACGAGAGAC
TGTCGAAGCACGACCTCAGCGAGGCGCAGTTGTCGCTGATCCGGGACATCAGGAGGCGGG
GCAAGAACAAAGTGGCAGCACAGAACTGCCGGAAACGGAAACTGGACCAGATAACCTCGC
TCGCGGACGAGGTCAGGACCGTCCGGGACAGGAAGCTGAGGACCCAGAGGGACCACCACA
GTCTGCTGGCCGAGAGGCAGAGGCTCAAGGAGAGGTTTGCGGCCCTATACCGACACGTTT
TCCAGAACCTCCGCGACCCCGAAGGGAGGCCGCTGTCCTCGGGCCAGTACTCGCTGCAGC
AGGCGGCTGACGGCAACGTGGTCCTCGTGCCGAAGATGCCTCAACACCAAGATCACCCGA
TGAACAGGACTTCGGATGATGAGATGGAGAGGAAAGCCAAGCACTACGACCAGTGACACA
TGGCCGCGCTCCGCCGCGCCGCTGCCTCCCAGCGAGGGGTCTACTCTTAAGTGCGGCCAG
AATTATCTGACTGACAGAACTATCTAAAAGACACCTGCCAAAATTGACAGCTGTCAACCG
TAGTATTAAGGCGCGGACGGGCAAAGGGTAATTTAGTACATACGTCATTTTGTATATATA
GATCGGTTTCGCGGGACGTATCGCCGTCCCTCTCGCACCTACACCACCCTCCACCACTAT
TATTGGAAGCGTAGGTTTTTGATGCGACCTAATATCGACCTTAAGCATTAAGGCACAAGT
AACAAATTGGTTTAACGTTGTACAATTAATTTTATGATTCGCTTCCTATTCATTTCTAAT
ATAACATATTATTATGTGCTTAAAAAAAAGTCTGATTATTTTTATTGTTGATACCCACGT
CATTATGAAATAGAAAAGTATTTGAAAAACAGATGAGAAAATTTCATCATGCTTTATCTT
CATCAGCTTATTACATTACACAATGTAAATTATATGCTCTCAATGATATTACTGCCAAAT
TAGATTTTGGGATGCAACCTTTGTTTGTTGAAATTATTATGCGAGGGAAAGGGATGGCGA
TATAAGTCTTATTCATTCGGTAAATTCCGACGATTTTAGTATACATATTAAATTGAGCTT
TGTGTGCGAGCAACACGGGTTGTATTTGTAGCAGAAGCGATGCACGGCGCAATGCAATAC
AAACTCGACTGACGGGGTGAACGACCTCATAGGATTCGCTTTTCATTGCGCGTTAACTAA
CCGCTATAGTCTCCCTGAACTGTATATGTCAGGGGCGCACGAACTATTTAAAGGCGAAAG
GCCTATTTAATTTAAGGGACAGTTTTGCAACATCACAGAAGAGTCATTTAAAGATTAAAA
ATTTGGAAAAAATATCATAAC
(4821 bp)

- SilkBase 1999-2023 -