SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13942_c1_seq3
Scaffold_idBomo_Scaf243
NCBI non-redundant
(nr)		PREDICTED:_glycerophosphocholine_phosphodiesterase_GPCPD1_isoform_X2_[Papilio_polytes]
Ontology
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
Transcript
Level		FPKM:8.32 TPM:8.37
ORF EntryO_BomoSK16870_complete:A_BomoSK_comp13942_c1_seq3
Sequence
(Nucleotide)
GTATTCCAAAAGTCGGAAATAATAAACCGATAATTCTGAACGCGAAATTAAACTGTAAAA
ATAGTTTTATTACATTTATTTGGTAAATAAGTAATATTTGTTTAAAATCAATCATTGGTT
TAAATTGTAAAATTACTAGCCTAATTCAAAACGAAATTAAAATATTGAATTCATTGGGTT
CTACATATTATCGTTAATCAAACGTAAAAATAATATTTGTTTAATAAGATTAAATTGTAA
TAATATTGTATAGATATTATTATTGATATAACATAAAATGGAGTTACTGCAACTATTTTT
ATCTCACGATGCAGCGTTTTTTTTTTCTTTACAAATTGAGCAATTAATTTACATGAGATG
AAACTTCACATGTCTTTACGATCGTTTTCGATCGTGCGGGATTTTTTTGACAACCCTAAA
GAATTATCTCCAGCCGGGAACAGTCCCTGAAAAGACATCCGCTGTTCTTTGACTTGACTT
TCCTTGTCGATTACGGATATAATTTCACGGTTTCTTTTTAAATTTTTATCGGGAGCCTCA
TCTCTTAGGTCCATCGAGGAAGCGAGAGACTCCAGGGAGGTAGCTGTGGAGTTTTGTTGT
ATTCTTTCACGGATAGAGAGATCAAAGTAAGGTCGGTTTTCTGATTCAATTGTCTGGAGT
GACGAAGAGCTTCCAGGTGGATGTAAATCTTCAAACGCCGCCAGTCGCATTATTTCTCGT
TGGGACTCTCGGGCCTCGACGAGGAATATGCTCTCCTTGACTTCTTTGGTTATGTATTGA
TCTAATTTATCATAGATCACAGCGTGCAGCCCCATTTCTTTTAATTTCTTGATCGTATCT
TTGTCGTTGTTGTCGTCACCCCAACAGAATATGACTAAACCTGCATCTGTCGCTAATTTC
ACCTGCGTAGGATCACGGAGCAGATCCTCGGTGTGCACGACGATGCCGAGCAGATCCGAG
CTCACGGCGCTCTGTACGGCCGCCGGGATAGACAGACATCTTGGGTCCCGGTACGGCTGG
TACTTATTAGTGATACCCACAGTCAAAAACATTACAGGATATTTGTTTTGCTTATTCCTA
ACCATAGTACAAATGTCTGGATTGAAGCAAGAAAACACAATGCGGCGTTCACCAGCATGT
TTCAGTACCACTTCCAACACCTTATCAACATAAGTGTTCATATCAAATGGATTGTTTAAT
TCAAATGTGCCATCATTCATTTCCATTGTCCATTTTAATTCCACATTGAATCCAACATGG
ATATCTATTGCTTTAAGAGCATCTTCTAAAGTCGGAAATGGTTGGTGCTCGTCCAAGTCA
TCATCAAAAAATAAAGTTTCTTTACTTCGTCCTTCTACAAGATGGTATACCTTCAGTTTT
TGTAGGTGTTCCAAAGTCAAGTCCTTCACTGGTAATTCAAGCATTTCTGTAAATTCAATT
TCCTTCTTTCTTTTCATTGATATGCACACATAAAAGTCATGATAAATAACTGGTATCATA
TCTTTACTCAGTTGAACATCAAACTCTAGCAGATCTGCACCACTTGCAGCTGCTTTTTTA
AGAGAAGCTATTGTATTCTCACGAATAGCATTTCCTTCTTTTGTTTTAAAACTTGCACCC
AAGCCTCTGTGTCCCACTTCTAACCCTGTCCAACTTGAGTCCCAATACTTGGCATACGAA
ACCTGCAAGTTACAAAGCTTTCCTGTATAGGACAAACTGTTAGGTATCCAAAATTCACAG
TTCCAAGAGGTCGATGTTTTACATTGCATGTTACTGGCAATTCTAAATT
(1789 bp)

- SilkBase 1999-2023 -