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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13939_c0_seq9
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:46.83 TPM:47.10
ORF EntryO_BomoSK16850_complete:A_BomoSK_comp13939_c0_seq9
Sequence
(Nucleotide)
AGATTCTGTGAATCAAATACGAGGAGTCGGCAAACCGCCCGGGCGGGCGCCACACGACCG
GAATCTGCGCGAGCGACGAGCGGTGCCAACGAATATAAATTTCAGTGAAATAAAACACGC
ATCCGCGTACCGCTGTAACGTAAAATGCGAGCGCAAGATTCTGTGAATCAAATACGAGAA
AAGTGAACGAGCCTCGAGTGCAGAGTACGACGCCACACGTCGCACTACGAGAGAGCGATT
AGGGTTTATATAACTCCAACGACGAAAACGATTCGAGCTTCGTGCTGTAGAAACTCTCAG
CCCCTCGAAATATTGTATAGAATCGCTCGGTGACTGCCAGGCATTGACACATCACTGCAC
TGCTCTTGTATGATAAACGTCTTAGAAATAAAAGATTAAAAAAAAAAAACGAAAAAAATA
ATATAATACGAACTAACGCCCTCTCGGTGGCCACGAAGAGGGATATTTATTATACTTTAT
TATTATTATTATTATTATTATATATGCATATATAAATCGGAGAAAAGTGATCTCTAAAGT
GACGTCACAATATTAATTGAATTGTGATCTTGTTAATTAGTTAGCCGTGTCGCATTTCGT
ATTGCCCGTATTTATTGTAGTTAATATTCTTTTATTACGTTGTAAATATCAACAATATTT
ATATGTTACATGTGACATCGCGTTATACTATAATACTAGTCATCGATCTAGTGTGTGTTT
ATTGTAAAATCATAATTTAATTGTTACTAAAAGAAATAATTAACGAAAACTTCGGTCGAG
TGCACTGAAGGCAAGAAGGGAATTCGTGTTTGAGAGCAAGTTACGTAACTGTCAAGATGC
AGACTCAATTAGGATCAGGCAATGATCTGCAGAGGAGCTACAGGATCCAGGACTTCGCCA
CGCCTGGCGTCATCATGAGGGAGCGGAGCTTCGTACGTCCTCAGTCGCATCACAACATGC
ATCATCACCAGTTTTCAAATAATGGGAAACGACGGAGTATGATCCTCACCAACGCAAAGG
GAAAACCGACTCTAGAAATCTACAGACCACCAGACGGCGTGGTGTCAACGAACGCTGGTG
CCGCCTGTACGACCACCACGGCGGCCGGCAGTGGTGCTGCGGCCACCAACAAGCTGAATG
TGCACGCAAAGGAGTTCACAATGGCGAAACCGATTGACCTACACAACAGAGGGGCATTGG
GCGTGGGGTACGCTAGTGTGGGACTGCAGCACTCCAGGTCGGCGGTGCTGCACGCGCAGG
TGCCGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCTCCTCAATAGCGCCTCCAGCG
GGAACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAAGCTGCAACCACAGACTATCA
TTCCTGAGAAGAAGAAATCCCCTCCGTCGTCGCTGACGAATGGTAACGGGAAGAGCATCC
GTCCACAATCGTTTACACCAGGATTGAAAAGGTCAAAGTCCTTAACGTCAGCGGATGCAC
TCGCAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGCCGGCGACCTTGGTACATTCC
CGCCGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGATCCGAATGCTGTGTGCGCCC
GTACCCTGATGGACGCTGTGGGGCACCTGGTCTCGCGCGCAGTGGAGTCGCCGCGGTACG
CGCTGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCGCGAGCAGACGGAAACCTTCC
TCGAGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGATAGGGACAAGCTGTTGGGCG
CGATGATCGGCGGTGGTCGACCTCGGTTGATGGCGTTCCTGTCGTTCTTGCTGGAGATGT
ACTGCCAGCTGCGGCGCCGGGCCATCCAGCGACGGGGAGCCAGCGCCCAGCCCGGGCACG
TGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCAGGCAGCCGGTGCCTTCTG
CTAGTGATACTGAGAATCTGTTCTTCGTACTGACGTACATAGGCCGAGACTTGGAAACTC
AGCTACCTGGAGATTTGGAGCGATTACTTACAGCCGTCCGTGACGCTTTCCTCAATACTG
CCGCGGCTCCTTCCATCAGGCGTACTTTACTGCAGCTTATAGAGCTTCACGCATCCCGGT
GGCAGTTACCAGGATGCGCAGTTCTTTATTACTATCCTTCGTCCAAATAGCACGCTGTGC
AAGGTGGTAGGTTGCAATGATATTGTCATCCATATAAACCTAGAATCGGATGTTCGTTAA
TATCTCACATTATGGATATTATTGCAGGGCATATCATTTTAAATCATCTTTGATGATTGG
CCTTATTTTAGAGCTAAATAAATTAATATATTTAGACGGATGAGGGTTTTATCGTGAGTA
TCTTGATGTGATGGAAGTCGCGAACTGAATTTAATCTTGTGGGATTTATAGATTCTTTGT
TATTCTCACTAAGAAAGGATCGTGTTTCAAAAAGCAAAGGTTACGAGCATTTCTTAATCG
AGTGTTCGCTCGTGTTTCTTTCTTAGTACTGTTGCGTTAGTTAATGTACAGGAGGTATGG
AATTGTCTTCTGTCGTAGGCATAAAGCTGCCATAAGCTCATATTATTGTGCCTTTAAAAT
AATTTAATGGATATTTAACATTTTATCGTCACTTTCATGCAACAAATTTTAATAAAAATA
TTGAAAGTGTGGTAAAGTGTAGTATTTATAAGATTTTGTTATTAGCTTAAGGTGGATTCG
AAAAAAAAATCTTTATGCCTGGAAAGTATTAAAAAGGTACATTGTAGATTAATTTGTTTG
GACAAATTGACAGTGTACACTACTGTACGATTCTCGCATAGTACTTTGTGCATTGTATCC
TTGTCGTATTCTAATTTAGGTATACATTGCCATCTATTAATAGCACTAAATATCTTGCTT
GTTGTATCGTTTGCATAGGATTCAATTATGTTTAGTAATTAAGTTACAATGCACTTATTC
CCAACATAATTTAGTACTTCATTGCACTCAGGTATTTAATTTATGTTTCAAAAATGTTTT
AGGATTTGTATCAAAATTAAAAAAATAAACGTTTGACTGAATTGTTTGTGGAAGTGAAAC
TATCTCTGTTTTATGCTTGTGATATTATAAATTTAAGGTTTCTGGTATATTTTTTCTGTC
CTAACCAAAGACTGTAATGAATGGGATATTTCGTTTTTATTTTTTATTAACAAAAAAGAA
AACTTGTTGAAGCTGGACCAAATTTCTTGTTTCGAGCTCATTATCTGAGGTTGTGTACGA
GTGAGCGAGGAGACGTTCATTAACTTAACCTTAGATAGCTCTTATCAATATATAATTATC
AAACTAATTTAAATGAATAATATGGGAAATATATTATTTAAAAAGACCTTTGACTTTTCA
TAATAATGCATTCTTAGCGATTTAAGTTAAAAATACGTTTGTAGAAAAAAGTTGAAATTA
AAAAAATGATGCTAACAAAAGAGATATTGGTGTATTGTATCTTTATTCATTAATCTTATT
ACGGGCAATAACGTTGTTTTTTGTTACCGCTGTAGTTTTTGTATGAATAAAGCACTTAAA
GGATTATAACAATAAAATATTAGAAAATTAAAAAAAAA
(3638 bp)

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