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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13939_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:64.79 TPM:65.17
ORF EntryO_BomoSK16832_complete:A_BomoSK_comp13939_c0_seq1
Sequence
(Nucleotide)
ATGTCTGTTGAGCGTAGGTGGGTGCGTCGCGTCGTCGCGAACGTAGTATCAATTGTATAG
TTTTTGTTATCACTTTGTTGTCGAGAGTGGCGCGGCTCTGACGCGATTACGCCCGCGCAA
TCGAAGCGGGCCGCAGAACGCCAGTCCGCGCACACGCCGGGAGACGCGCGGAGTTCTCGC
GACCGCGACCAAACCAACACGAACAAACAATCGAACGCCTTCGAACGAACCTCAAAACTA
CCTCTCGCATCGCTGCCTGCTAATCTCTAGGCAAGAGCATTGACCACCGACCGACGCCTG
ATCACAAGCTATATCTGCCCTCTGGGAATCCTCAATCGAGGCTGCTTGCCGGATATACGG
GCTATTTATAAAATTCCGCCGTCGAGAGAGAAATGAGACGTAATTTGTTGGTGGTTTTGC
CAAGTTTGCACTGAGATTTGCAGCTTGATGATAGTGATAAACGCTGTAGCTAAAGTGTAT
ATAAGGATTTATTTTAGAAGTGAAAGAGAGGTGCTATTTAGCGATCTAGTGAATTCTAGA
AGATAAACTAATTTATTGAAAATGGTGCGAGGACGTTATTCTACTTCTGATGTAGGGGCA
TTGGGCGTGGGGTACGCTAGTGTGGGACTGCAGCACTCCAGGTCGGCGGTGCTGCACGCG
CAGGTGCCGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCTCCTCAATAGCGCCTCC
AGCGGGAACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAAGCTGCAACCACAGACT
ATCATTCCTGAGAAGAAGAAATCCCCTCCGTCGTCGCTGACGAATGGTAACGGGAAGAGC
ATCCGTCCACAATCGTTTACACCAGGATTGAAAAGGTCAAAGTCCTTAACGTCAGCGGAT
GCACTCGCAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGCCGGCGACCTTGGTACA
TTCCCGCCGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGATCCGAATGCTGTGTGC
GCCCGTACCCTGATGGACGCTGTGGGGCACCTGGTCTCGCGCGCAGTGGAGTCGCCGCGG
TACGCGCTGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCGCGAGCAGACGGAAACC
TTCCTCGAGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGATAGGGACAAGCTGTTG
GGCGCGATGATCGGCGGTGGTCGACCTCGGTTGATGGCGTTCCTGTCGTTCTTGCTGGAG
ATGTACTGCCAGCTGCGGCGCCGGGCCATCCAGCGACGGGGAGCCAGCGCCCAGCCCGGG
CACGTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCAGGCAGCCGGTGCCT
TCTGCTAGTGATACTGAGAATCTGTTCTTCGTACTGACGTACATAGGCCGAGACTTGGAA
ACTCAGCTACCTGGAGATTTGGAGCGATTACTTACAGCCGTCCGTGACGCTTTCCTCAAT
ACTGCCGCGGCTCCTTCCATCAGGCGTACTTTACTGCAGCTTATAGAGCTTCACGCATCC
CGGTGGCAGTTACCAGGATGCGCAGTTCTTTATTACTATCCTTCGTCCAAATAGCACGCT
GTGCAAGGTGGTAGGTTGCAATGATATTGTCATCCATATAAACCTAGAATCGGATGTTCG
TTAATATCTCACATTATGGATATTATTGCAGGGCATATCATTTTAAATCATCTTTGATGA
TTGGCCTTATTTTAGAGCTAAATAAATTAATATATTTAGACGGATGAGGGTTTTATCGTG
AGTATCTTGATGTGATGGAAGTCGCGAACTGAATTTAATCTTGTGGGATTTATAGATTCT
TTGTTATTCTCACTAAGAAAGGATCGTGTTTCAAAAAGCAAAGGTTACGAGCATTTCTTA
ATCGAGTGTTCGCTCGTGTTTCTTTCTTAGTACTGTTGCGTTAGTTAATGTACAGGAGGT
ATGGAATTGTCTTCTGTCGTAGGCATAAAGCTGCCATAAGCTCATATTATTGTGCCTTTA
AAATAATTTAATGGATATTTAACATTTTATCGTCACTTTCATGCAACAAATTTTAATAAA
AATATTGAAAGTGTGGTAAAGTGTAGTATTTATAAGATTTTGTTATTAGCTTAAGGTGGA
TTCGAAAAAAAAATCTTTATGCCTGGAAAGTATTAAAAAGGTACATTGTAGATTAATTTG
TTTGGACAAATTGACAGTGTACACTACTGTACGATTCTCGCATAGTACTTTGTGCATTGT
ATCCTTGTCGTATTCTAATTTAGGTATACATTGCCATCTATTAATAGCACTAAATATCTT
GCTTGTTGTATCGTTTGCATAGGATTCAATTATGTTTAGTAATTAAGTTACAATGCACTT
ATTCCCAACATAATTTAGTACTTCATTGCACTCAGGTATTTAATTTATGTTTCAAAAATG
TTTTAGGATTTGTATCAAAATTAAAAAAATAAACGTTTGACTGAATTGTTTGTGGAAGTG
AAACTATCTCTGTTTTATGCTTGTGATATTATAAATTTAAGGTTTCTGGTATATTTTTTC
TGTCCTAACCAAAGACTGTAATGAATGGGATATTTCGTTTTTATTTTTTATTAACAAAAA
AGAAAACTTGTTGAAGCTGGACCAAATTTCTTGTTTCGAGCTCATTATCTGAGGTTGTGT
ACGAGTGAGCGAGGAGACGTTCATTAACTTAACCTTAGATAGCTCTTATCAATATATAAT
TATCAAACTAATTTAAATGAATAATATGGGAAATATATTATTTAAAAAGACCTTTGACTT
TTCATAATAATGCATTCTTAGCGATTTAAGTTAAAAATACGTTTGTAGAAAAAAGTTGAA
ATTAAAAAAATGATGCTAACAAAAGAGATATTGGTGTATTGTATCTTTATTCATTAATCT
TATTACGGGCAATAACGTTGTTTTTTGTTACCGCTGTAGTTTTTGTATGAATAAAGCACT
TAAAGGATTATAACAATAAAATATTAGAAAATTAAAAAAAAA
(3042 bp)

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