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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13937_c1_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-related_tumor_suppressor-like,_partial_[Bombyx_mori]
Ontology
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164 P establishment of tissue polarity
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009888 P tissue development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016324 C apical plasma membrane
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149 P peptide cross-linking
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032880 P regulation of protein localization
GO:0035159 P regulation of tube length, open tracheal system
GO:0035209 P pupal development
GO:0035220 P wing disc development
GO:0035329 P hippo signaling
GO:0040008 P regulation of growth
GO:0042067 P establishment of ommatidial planar polarity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045296 F cadherin binding
GO:0045317 P equator specification
GO:0045570 P regulation of imaginal disc growth
GO:0045571 P negative regulation of imaginal disc growth
GO:0045926 P negative regulation of growth
GO:0046620 P regulation of organ growth
GO:0048105 P establishment of body hair planar orientation
GO:0050839 F cell adhesion molecule binding
GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
Transcript
Level		FPKM:4.93 TPM:4.96
ORF EntryO_BomoSK16826_complete:A_BomoSK_comp13937_c1_seq1
Sequence
(Nucleotide)
GTTCTTTTAACAGAAAACGCATTTGGCACTTTGTTCATTAATTAATAATATGGCTCAATA
CAATCGTCATTAAAAAGAACCCTGGATGTACTATTTATTACTACATAGTTGAAAGTAATA
GCTTCCAGAAAACATGTATCACAATAATTAAACTTACATAAATATTTCACACTATAAGCG
TATTTGTCTTATTTACAGTAAAAAATAATAGAGAACATTGCCTACATCCAGAGTCGAAAT
TATTTTGTTCTGTTCATATAAAACAAATGCAGATTTTCTGTACAAAACGCAAATATCCTA
AACGTTATAAAATATATCTACACGTATACGTATTTACAGTGAGGTTTGATAGCTTAAACA
TTAATCTATACATCACAAGAAGATTACATACTATTATACAAAAAGAATAACAATATATGG
CAAGAGGCTTGGAACGCGAAATCTTGATACAAGATCCCAACGAAACAGTTTTTACAAAAC
TCAAAACAAAGTATTATTTACAGTCTTATATTATCATATTAAACATATTCTTCAGAAGGT
TTCGGCGTGCCGTTCTGAAGTCTCAACGAAGATGACATACGCCCGTTGACAGCGTCTGGT
AATTCAGCAATGTCTTTAAAAACCCCGATCATACTTTCGAAATTGGGTCTCCAGTTAAAG
AGATGATCCCAACCGAGAGCGGCTGAGGCTGGTGAACCATTCGCTTGTCGATATAAAGCT
GAACTGACATGCGGCACAAGATCATCATCCGAAGCTACTAGAGTGCTTAAAGAGCCTCGA
AATGAAGAGTCAAAACTTTCATATGGTGGCGGTAAAATTGATTTCTTTGTGTTATTTGCG
TTGCTCACATTTGGTCTCCTAACGTCGTCAAGTTTTTCAGCATTAATACTGTTGTTATCG
TATTCGATTTCGGAGCAAGTAAAACTGTCATTACCGCTTTCATCATCGGACCCTGTTGAA
CTTCTATTGTCGTCTTGAGGGGAATGATGTCTATGTGACATGTGATGTCCTACTCCTGTA
CCTCGTTGTGCTTCACTGGAGCTAGAAACTGCATCTAATGTTGACACTAAGCTCGACGTT
CTTTGTCTCGCATTCATTCTTTCTATTTCTTCTGCAGTTAAGCCGACAGCCCCTGATCCT
ACGGACACTACTTGAGGTACTTGGGGTGTAGCACTGGGTGTCTTTCTTCCAGCTGATGAA
CTTTGTCCACTTAACTGAGACATCACAGGGCTGTTTAGGCTACGTTCACTATTACTATGT
AAAGCATCTTTGCCCACACCTCCAGAACTGGACGTTGTAGCAAGTAGAGCGCTTTGCAAA
GGTTTTCCTGATATATCGTGCAGGGTCAATATACGAGGCTGCTGGCTTAATTCACTACTT
GGTGATAGTCGTGCAAGTGGCGTTGTTTGATGTTGGCGTGGTTGGGGTGGGGGCTGAGAA
GCCTGCTGTAGTACTCTGGACGGGTATCCGCCTGGGTGATGAGGAGAGTGACGATGTTGA
GGTGTTTGATGTTTATGATGATAACCGGTTAAAGGTGGTGGAGTTGCTTTATATTTTCGG
ACATTAGCCGCTTCTCGAAAACCTTTGTAGTGGTAAACAATATCTATATCAGAAGGTGCT
ATTGAACTTGCATTTTCTAAATCGTAATGTTCTGGTATTTCTGAATTTAGGTCCATTCCA
CTTGGATGATCATGGTGATGTGAAGTGTTGGTCGAAAGAGGTGGAGGCGGATGATGATCT
TCTCTTAAAGCTGGGCTTTTCCCAACAACTTCTCGTTCAATGATGTCGGGACGTTGCGGC
CTGAGTGGGTCTATATTCATTATTTCTCTGTCTTTATATTTTTTTGATAAAAGTTCAGGA
CCAACAATATGTCCGACATTACGTGTTATATCAACGCTTTCAGAAATATAACTGTTTAGG
CTAGTGTCATTGTTGTGTAAGCCACGATTCATCAAACTTTCATTGGTTCCAGCTATTAGG
TTTGGTGCATTAGACATGGATGTTCCACCATTTTGCTTCGAATGAACGGCATTCATTTTC
CCTGTGGAGCCACCAACTTTTTCCTTTTTTTGCTTTCGTAAACGATAGAATATAATGGAC
ACGGAAATAGCAACAAGTAAAATTACGAAAAACACAATGACAAGTGTAATACCAATACGC
AGGGGATCTGGATTTTGTGCTGCCCCAATACCAAATGCACTGTGGCAACCATTTAGAATT
TTCCCTTTTAAAATGGTTTCCTTAAAAATACTTCCATTCCCAGCAAACGGCTGTATTTCA
TTATTAATAGAAAAGTTGGCTAAGCAACCTTCAAATTTGTTTTGGCTCGAAGTCATTAAT
AATTCAGCTTTTACTCCTCCTAGGGACATTACAGTGAGATACGGATCTAAGAAATCGTGT
ACACCAGCAGCATCCAGCTCTTCCCCAACATCATTATTGTCTACTAACAATCGAATACTC
CTTCCAAAAGACAATAAGGTTATATTATGCCAGGTACCATCAGACACATCATTCTGTTCA
TTTTGTGTCATATTCACCACGGAATTCTGTTTTGAAGTATAACTTACTTTTCCTTCGTGT
AATTCAATTAATGTAAAATACTTTTCAGTGGCTGCGTAAAACAGTATTCCATCTTTTCTG
TGAGTCCGAAAAAGAAATGACAACATTTTGGCTGGACTATTTGTACGTGTATTAATTTTA
CTAAGAACTTTATTAGCGTGTTTTTCCCACATGGTATTTCCGCTGTAAAATGTATCCAAT
AACTGCATTCTCCGATGTTTTTCTGATATAGAAAATGATATAAGCCCTGTTTCTCCGACT
GAAATAGATTGTAAGGCGGCTGAACAATCAGGTGCAATAAAAGTACCATCACATTTACAC
AAATTGGATTTCCACCGGTCGATGCATTCTCCCAATCCACACATAGCTTTTTTATAACAT
GTTCCTTTTTCGGATCGACCACAATTTGCTTCAACACCTCGGGAATTTAAAGGATTTGAA
AGATTTAGCAAACGACCATTTATGGTTATGCTATGCATACATCCTACGAAGTCATCAGAG
TGGACTTGCCCTGGGCGTTCTAACAGAGGATCAGCTTTGTGAATTCCTCCAATCAAAAGT
GGTTCGTTGTTGAAGTTCAAAGTTCCGGCTTGTCCGGTGTCATCATTGTAACAGGAGTCG
TCTCCAGGTTCGCATTCCATACAAATATCTCCGTGATCAGTGCAAGATGTTGTGCTCAAA
GATATGACCCTTCCATTTCTTGTTGCAGTGAGTTTATGCCAGTTGCCGTCCGCTAAATTT
TTATTTGGATTCGATATGGCTACAGATGTTATTGAAGTTCTTGCACCCCCGAAAGAAAAA
ATAGGTTTTCCATTAAGTAGTTCAATAGCTATGAAGTCAGATCTGCCTCCAGTTTGCGCG
CCGAAGTTGTATAAAAGTAATGCATCCGGTTTCGTTGTTGCAAAAATTATCGTGATGTCA
TTGGTCGATGCATCCAGTGCCGGGAACTGCATATATGATAGTTCGTCGAATCCAAATGTT
GTGCTTTCACAATGGGTTCCGTAACGTCCATCCGAACAACTACATTTATAGCCAGGTTTT
AAGCTGACACATATTCCACCATATAAGCATGGATTTGGTCGACATGAATCTACCAGAGCT
TCACAATGATTACCCCGATATCCGGGCCGACAAAGACAGAAGAATGAACTACCATCTGCA
CTTTCTTTACAAGAACCTCCATTTTTACAAGGACTGCTACTGCACACGTCATTTTTTTCT
AATTCGCAAGTTTTCCCATCACGGCGAACAGGGCAAGTACATAAGAAATCATGTCCTTGT
TTTCGACAATGTCCTCCATAGCGGCAAGGATTAGGTGAACAAGGATCTTGACGTTTTTCG
CAATTCTTTCCCATAAATCCTTCAGCACAATGACATTCGTAATCATGTTTAACGAAAGGT
GAAGATAAGATAATAGCTGAACTATCTATAATTTTTGTGTCTTCTAAAATCTTAATGGAA
TTCGTACATAAGCCACCGTTTTGACATCGATGTGACGAGCATGGATAATATCCGATAGTA
ATTTCGTGCTTTAATAATGTAGTGATTTCGAATTCTTTATTTTTTAAGTAATGTTCTGTT
GATTCTTTCTTAGAAATAGAGTTGTTTCCTTTCAAGGCTACTGTTAGGTCTAAATAGTTG
GGTACTTCATTGACGCCGTATAAAAAAATGGTTTCCTTATTTTTGTCTAGCTTGGCGTTA
AGAATTTCCAACAAACTGCGATAGAAATGTGTTAAAAAAAATGTTGCCGTCATATTCATA
ACTCTGATGGTGACCGATTCTTCCACAGTGGTGTTGTCAAAAGAAAAGTATTCGACACTT
ACTGAGGATATGACGTCTTTGTGAATACCGTCATTACCCAGCACTGAAAAAGAATAACCT
TGACCAGGTTTTATAGTATTAGTGTAGAGGTCACATCCAGATCTGATATTCAATAGTGAA
AGTGTTCTATCTGAAGTAGAATCTCGAATAATCTTACATTTATAGTCACCAATAATATCA
GGATCATTAGGTTTAACGTCAGCAATTTTTCCATTTGGCACTTTGTTATTAAATGCATAT
ACAACAACATGAACCGATCGAGGAGTCGGCGGATTATCATTTCGGTCGAGAACTTTTATT
AATATATCATATTTAGATCGCATTACAGGTGTTCCACTATCTTCAATTTGTATACTTATT
TCGAGTATCGGTGTAGCTTCCCTGTCGATTTTCCTGGCTGTGGATAATACGCCTGTATGC
TTATTTACATTTATAAAGCTCTCATGTTTCCCACCTATAATGGAGTACGTAAAAGGTGCA
CCATTTGGTGGCAAATCTGGATCTGTCGCTGATAATGTTGTTATGCTGGTGTTAGGTGGC
TCATTCTCGTACACTGATCCTTCAAAAGAATTGATGTCGAAAATAGGACCGTTGTCATTT
ATATCAGTCAACATTATTTTGACTGTCGCTGTTCCTGTTTGGGGTGGTGAGCCGGTATCT
ATTGCACCAACTATTAATGAGTATGCAGGTAGTTTCTCTCTATCTAACTTCCTTGCTACT
TCTATTTTACCATTCTGTGGATCTATTTTGAAACTTTGTTCAATATTTCCGCCGATAATT
GAGAAGCTGAATTGATTATTTTGTGGCCTTACATCTTTGTCTACAGCCTGTACCTGAATA
ACTTCGTGGCCAATATAAGCTCCCTCAGATACTGTAGCTTCATAATTAAGGCGTACAAAC
TCTGGAGGATCATTACCGTCTTGGATTGAAATTATCACTTGTGCTTCATCAGTGTCGTTA
CCTCGAATACCTCCAGAGTTTTTTGCAAGTACTGTTAATACTACTCTATTTTGAGTTTCT
CTGTCCAAATACCGTGCCACTCGAATAACGCCAGTTTGAGAATTGATTCCAAAACCTTTA
TCATTACTTGAACCAACAAATAAGTAATAGATTATTCCATCATCACCACTATCCTGATCT
GTAGCTTGTATAACTCCAACATTTGTTCCAACTTCGGCTGATTCTGATACGTCGAAATGA
AAAACTGGTTGTTTGAATTTTGGATAGTATTCGTTAACGCCTGTTATATGAATGATAATA
TTGGTTGTGTTTTTCATTGACGAATCGGGGTTTTCAGCTCTCACTGTTAAATCATACAGG
TTTTTTTCTTCAAAATCAAATACTTCTTTCGAATATATTTCTCCGGTGTTCTCATCAATG
TAAAATAATGATAGCATATTAGAGTTTAAATAATACTTGATTATTGCATTTTTTGGTGAA
TCGATATCTACAGCGGTCACTCTATAAATAAACGTGTTTAAAGGTGAGTTTTCAGGCAAA
AATGCGACGTAGGTTGTTTGATTAAAAAAAGGTGCATTATCATTAATGTCTGTCAAAATA
ATAGTCAATGTCGCTGTTGCTTTCTTTGACTTAAAGCCAAGATCATTGGCTGTGATATTG
AGTCGATATTCCTGTATTGTATCAAAATCGAGCGGTCGCATTATGCTAATTGCACCAGAT
ATAGAATGTATTTGAAATTCGTTTCCTTCATTTCCGGACGAAATGGAATAACGAATAATT
CCATTAGGTCCATTATCTTCATCACTAGCCTGTATAGTCAAAATTGACGAACCTACAGGT
TCATTTTCAGGCACTATAACTTGATAGCTTAAAGCCGTGAATTTTGGGCTGTACATATTT
TCACCGGTCACAACAAAAACGATTGATGTTTCGTCTGATTGTGGCGGCACACCGCGATCT
GTAGCTTTTATTTTCAGTTCATAGTATTGCCCTAAATAATAAAATTGTTTGTTTACGATA
ATCCACCCACTATTTGGGTCAATAGTCAAGTACGACGAACCATTACCACCAGACACGTAA
TATTCAACTTCAGCATTTATTCCAAAGTCCATGTTGTCTTCTGCTTTCATTTTTATTATT
TTTTCACCAATAGTGGCTTCTTTAGGAATAGGTATTAGTTTCTCATGATCCCTGAATTTG
GGTGCATTATTGTTTGCATCGACAACGTTTATGATCACTAAGCACTCTGATGACATTGGA
GGTTTCCCATTATCTGTAGCTACAACAACGACAGAATATGTGTTTTCCGGAGATGAATTT
GTGGACGTTCTTTTATAATTCATGGTGAATTTACTTAAAATCTCTCCAGTCGCTGGATCT
ATTGAGAACAAATCTGATGGTTGTTGTAACGAATATGATATTATCGAATTTGGGCCTTGT
TTGTCTCTGTCCGTAGCGATTACTTGTCCAACAAAACTGTTCTTAAATTGCATTTCAGGA
AAATTAAAACTATAATAGGAGTACTCAAATTCAGGTGCGTTATCATTTTGATCTTGTATA
GTTATGGTAAGGGCTGTTTCAGATCGCCATGCTCCGTCGATAGCAGCGACTTTCAAAATA
TATTCGTCCTGTATTTCTCTATCTAAGGAACCTGCCACAGTAACATTTCCAGAGATTGGA
TCAATAATAAATTTATTTCCAATATTTTCAACAAAACTATACGTAGCATTTGCATTTGAC
CCAGTATCCAAATCAGAACTGGTCACTCTTATTACAAAGGAACCGATTTCTGCATTTTCA
GTTACATTAACACTAAACAGCCTTGTGAATCTAGGAGGGTTGTCATTTTTATCCAAAACT
GTTATTATTACTGTTGATGTGCCGCTTAACTGTGGAAGGCCATGATCTTCAGCTTCAACA
ATTATTTCATAATATGGTATAGACTCACGGTCAAGTGCCATATTTGTATATATTTCACCT
GTTTCAGAATCTATACTAAATGTTTCATCGTAATCATTTACTAATTTATAAGATATTCGT
CCATTTTCATTAGAATCGTAATCAAAAGCATGAATTACTGCCACCAACTGAGGAGGGGAT
TCTTCTTCCAACACTGTAGCATTGTACAAAGAATTTTCTATTATGGGAGCATTGTCATTG
GCATCTGTGACTTTTATTTCAACTTCGATAAAAGATTTCAAAGGAGGGTTATCAGAATCT
TTTGCTTCAAGCCATACTTCATATAATGGCATTGTTTCGTAATCCAAACCTTTTCCAGTT
AAAAAAACTTCTCCACTCATTTGATCTACACGTAGTGCATCACCAATATTTCCTCCCGCT
ATTCCATATTGTAATAGCCCAGCAGGACCGGATTTTGGAGATGTAGCTGATAGCCTTGTG
ACTAATACACCTTCTGGAGTATCTTCGGAAAATGTAAACGAAAGCTTGTTAGTCACAGAG
AACTTTGGAAAGTTTCTGACGGATTTGAGAATAAGTATCAATTCAGCTGAACTTTCTTTT
GGTGGTGTTCCGCTATCTTTTGCAGTGATTACCAAATTGAACGATGATATACTTTTGTCT
TTATAAGTAATAAGATTCTCTTTTGCTTTTATGACACCCGTCTCTTTGTTGATGGTAAAC
AAATGCTTGTGTTCTCCTTCTAAATCATATTCAATTTTTTTACTCAATCCAATATCATTA
TCTGTGGCTTTAACTCCAAAGACAAAATTTCCTTTCATAGTCCTTTCAGAAATTTGTGTT
TCATATACGGGATGTGGGAACGTCGGTGTATTGTCATTTTCGTCTTCAACAACAATCGTC
AAATTTGCAGTTGCAGTTCGAGGATCAGTTGTCGATGAATCCTGGGCCATTAAAATTAAG
TAATATACATCCCATTCCTCCCGGTCTAATGTCTCATTAGTATATAGCATACCAGTATTA
GGGTCTATTTTAAATCGTTCTGATTTATCTCCAAGTACACTGTATCTTATCTTAGCATTG
TTCCCCGTATCTTTATCGGTAGCTTTTGCATGAAAAATCATTGTTTCTGAAGGTAAGTTT
TCTTTTACACTAGTCTTGTAACTTTGTCTTTCAAACTCTGGACTATTATCGTTTACATCT
TGTACAATTATTTTTACAGTACCAGATCCTGTAAGAGGTGGCGATCCAGTATCCATGGCG
ACCAGTGCAAGGGTATATTCATCTTGTACTTCGCGATCTAAGGTCCTAAGAAGTGATATT
TGTCCCGAAGACGCATTAATTTTAAAAACATCTGCATCTCCTTCTTTTATAAAATAACGA
ACTTGATTGTTAAATGGTGGTGAATCA
(8667 bp)

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