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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13937_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_cadherin-related_tumor_suppressor_[Papilio_xuthus]
Ontology
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164 P establishment of tissue polarity
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009888 P tissue development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016324 C apical plasma membrane
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149 P peptide cross-linking
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032880 P regulation of protein localization
GO:0035159 P regulation of tube length, open tracheal system
GO:0035209 P pupal development
GO:0035220 P wing disc development
GO:0035329 P hippo signaling
GO:0040008 P regulation of growth
GO:0042067 P establishment of ommatidial planar polarity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045296 F cadherin binding
GO:0045317 P equator specification
GO:0045570 P regulation of imaginal disc growth
GO:0045571 P negative regulation of imaginal disc growth
GO:0045926 P negative regulation of growth
GO:0046620 P regulation of organ growth
GO:0048105 P establishment of body hair planar orientation
GO:0050839 F cell adhesion molecule binding
GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
Transcript
Level		FPKM:2.00 TPM:2.01
ORF EntryO_BomoSK16821_internal:A_BomoSK_comp13937_c0_seq1
Sequence
(Nucleotide)
GAATCAGCATCATAAGCAAGGATTGATATTATAAAACCACCATTAGGTGGAATAACATTT
TCCATTACGTATGCCAAATACGGTGAATCCAAAAACGTTGGTGGGTTATCATTAATATCT
TGAATAGAGATGGCAATTTCTGCAGTATCGAACCTAACATCATCTTTTGCGCAGTCCTCT
GCTTTAATAGACAGAAGATACCGTGATTTTCTTTCGAAATTGAGATTTTTTGCCACTCTA
ACAATTCCGGTATCTTCACTGATACTAAAATCTCTATTTTCATCACCAGAAGCTATTGAA
TACCGAACTCTGCCATTAGCATCTTCATCAACATCAGTAGCTGAGACCTGAAGCACGCTG
GCTCCGATGCTAGCATTTTCCGGAACTGATGCACTGTATTGCTTAGGATCAAAAACTGGA
CTATTGTCGTTTTCATCTATAATACTAATTTTTATATCCATCTTAGTAACGTTAGGAGGG
TCGCCTCTATCTTTTGCAGTGACGGTAATTATGTAATTTGATTTTAATTCTCTATCCAGT
TTTCCAGTTGCTCTTATAATTCCATCTACATTACCCAACGAGAAATATCCGTTAATTTCT
GGGTTAGGCATCATGAAATATTCAACGTATCCATTTCTCCCTTCATCTTTATCAATCGCT
TTAATGGTCATGACAACTGTATTAAGAGGAATGTTTTCAGATATAGATGTTACATTCGGT
GTTATAAATTCAGGAGCCATGTCGTTCACATCCTTCAGTTGTATCGTCACTTGAACAGTA
GACGACAACTGAGGTTCGGGTGGCTTGGCTGAATCCCTTGCAGTCACAACAAGGTTGTAA
ATTGGTAGCTTTTCTCTGTCTAAATATCTCTCTGTGTAAATAGTGCCATTGTCGGCAATC
CCGAAATCTTTGTTTTCATCTCCGGATGTGATGCTGTATCGAATTTTTCCATTTAAGCCT
GAGTCTGAATCCGTTGCGCTGACTGTCACCACTGAAGATCCGATGGTAACGTCTTCTAGT
ATTTCGTTAGAGAAGCTCATTGGATCAAACAGAGGCGCGTTATCATTGAGGTCGATTACA
TTCACGTATACTGTAACAGTCCCCGATAATGATGGGTGACCGCTGTCCTGTGCCTGCGCG
ACTAGTATATAGTGTTGTATCTCTTCATAGTCGAGTCTAGCAGTGAGCGTGAAGACTCCG
GTCTGAGGATTGAGCGAGAAGACGTCATTGGCCCAGTCCGATATGACAGTGTACGTCAAT
TGAGCGTTTGGCCCGGAATCAGGGTCAATGGCCGCCACGGTGCCCACCACAGAACCTCTC
GCTGCGTTCTCGGGAATGTCGAAAGAGTATGCGCTTTCTTTGAAAACGGGCGGGTTGTCG
TTGGTGTCCGTTACCTGAACTGTTATAGTCACATCGGTAAATTGAATCCCATCTTCAGCT
CTGACGATAACTTTATATTCCGGAACTGTCTCTCTATCTAATGGGTCTTTTAGCGTTAGG
ACACCAGTACTAGAATCCAGAGTGAAAGGAGTCGGTTCCTCGTTCTGTATAGTGTACGTG
ATAGTGCCGATGGTGTCAGGGTCTTCTGTGGTTATAGTAGCGACCCTCTGTCCCGGTGCC
AAGTCTTCTGAAGCCATGTAAGCAGCCGGAATATTCACAAATTCGGGAGGGCTGTCATTC
TTATCCAGGATCACAACTTCAACCTTTGTTGTGGCAGTTTTCAAAGGCGGCACTGACGTA
ACAGCACAAATTTCAACTTCATAACGGTCTGTGCCCGCCTCGCGGTCTAAGGAAACGGCT
GTAGATAAGATGCCCAGCGCTGAGTCGATATCAAATAGTCTGTCCACTTGTCTACCGTTA
CCAGTCACATTCACTATATAGTATTCTAAGCCTGATCTATAATTGTTTGTTAAGTTTAAC
ACTGCGGTGCCTGGGGGCTCGTTTTCAGCCACAGACACCATGCCCACATTTGTCCACACA
ATACTATCGAGTTCGTTTCCACCCATAATAACATTGAGATATGTTTCGGTACTTTTTTGC
TCACTTAATACTGCCTCATCTGTTGCTTTTATGACAAGATTCCACCTGGCTTCAGGAGTT
GCGGGAGGGTATCGGAGTACCAGCGCGCCATTGCTTCTATGTAAATCGAATAAATCGTTG
CCACCGTGAATTAGCTTATAAGTCACTAAGCCATTAGTACCCGAATCTAAATCACGCGCT
AAAACATTCATAATGAAGATTCCACGATTGGCGCTTCTTCCCATTCTTTCTGAACTTATT
ACAGCAGCATTCATAGAAACAAACACGGGAGCGTTATCGTTTATATCCTCTACGATTACA
GTAACGAGTTTTTCGGCCGATAACCGTATTGAAGGAGGCTCAGCTCTGTCGTACGCCGCG
ACAGTTATACGAAAGGTATCAATACTTTCTCTGTCTATAGGTAATAATGTGTGTATCACT
CCAGTCACATTATTGATAGCAAAATGTCGTTTATTATTAAACGGTTCTTGATGAGTTATA
GAATAGTAAACCTTACCATTCAGACCTGAATCTGGGTCTTCTGCAGTTACCGTAACAATT
GGAGTGTGTTTTGGAATACCTTCTCTGATTTGACGCACAATAGCAGTATTAGTAAAAATA
GGCGCATTGTCATTGGCGTCGATAACATTAACAGTAAATAAAACACTCGATGACAAGCTT
GGACTACCACTATCAGTCGCCGTGATGTTCATTACATATGAAGTTAAATCTTCATAATCC
AGTTTTTTGTGCAAGAATAATTCTCCAGAATAACTATCAATAAAAAATGCTTCTTTCCTA
TTTCCGGATGTGATTGAATATTGTAATTCACTATTTATACCCAAATCAGCGTCTCTGGCA
AGAAATTGAATGATCTTTTTATTAACAGGTTCCGTTTCCAAAACAGATACTTCTTTTTCT
GTTACAAAGAAAACTGGAGCGTTATCGTTCTCATCTAATACATCTATAATAACAGTTGCT
GTTGAAGATAGCTGTACAAATTGTCCTGAATCATGAGCCAAGATTGTAAGGCGATATTGA
TCCTTAGTTTCTCGATCTAATCGTTTACGAATCTGCAGTTGACCTGTGGCTTCGTCTAAG
GAGAATTTTCTTAGATCATCGCCTCCAACCAATTTGTAATATATATCGCCATTTAAGCCT
TCATCAGCATCGGTTGAATAAACTCGCATTATAGAGGCCCCAATTGCGGCTCCTTCGGAT
ACTTCGATTTTGTAAGGAGTCCGCGTAAATATAGGAGCATTGTCGTTTACATCTGTTATG
TAAATTGTAACCCTAACGGAATCATAAAGTTTAATTTTACCGTTATCACTGACTGTAACT
GTCAATGTTATATAATTTTGACCACTATTATGGGCCAATGTTTCCCGATCAAAAGTTTTC
AATGTTTTTATGAAACCGTTCCGCGCATCGATTTTAAAGTCACTTTGGGCAATGGGTAGT
GAAAATGTCAGCTCTGCATTTCGTCCTATGTCTTTGTCGGTCGCGGTTAGTTTGCCAACA
AAAGTATCTGGAGGTTCGTTTTCTTTGATTTTGAAGATGAATGTTGTATTCGTGAATTGC
GGGCTGTTATCATTTTCATCCAAAACATGTATTACTACTGGCACCTGCGATGATCTGGGG
GGAGTGCCATGATCTGTGGCTACGATAGTTAATGAATAATAGTCTCTTTCTTCTCTATCT
AACGGACTCTTCACATAGAGATAGCCATCTGGAAATATACCAAATTTTTCATCTGTATTA
CCCTCTTCTATGTCATATGAAATGCGACCGTTGAGATTTAGATCCGCATCTGAAGCAGAA
ATTGCAAAAAATCTTGTATTCACTAGCGTGGATTCCAACAGTGAAGTTTCGTATGAAGTA
TGATCAAAAACTGGAGTGTGGTCATTAATGTCATCTACTATAATTGATATCGAGTTCTTC
GTGGCAAGTGCAGGAGAACCATTGTCAGTCGCAGTCACTTCTATCAATAAAACGTTTCCA
GGCTCTGTTGAAATAGGCTTATTCAAATAAATAACACCAGTGGTATCTGAAATACGGAAA
TAATTCTCTGGATTGCACGTCAGTTTATAAAATAGAGTCCGATTTGATCCAGAATCACGA
TCAGCTGCTCTCGCAAATAATACTTCTTGTCCTACTGCCATGTTTTCAGGTATGTGAATT
TCATCCCTATCCTCAATAAAGAATGGATAATTATCATTAACATCCAAAACAGAAATGTTT
ACTGTAGTAAATCCAAACGCTACGCCAGTCTTAGCCATAACTTTTAAATAATATGTCATC
TTCTCTTCCCTGTCAACATTCGATTCAGTGGTAATTATACCAGATTTCTCATCAATTTTA
AAAACTTGGTTGGGGTCTCCTTCTATAATGTAATACGATAAGTTGTCACTTGAAATTACG
GCGTTAACTTTACCAACATACCGGCCTATATTAGGTGTAGACAAACCTTCGTCTTCGACC
ACTTTAAAATTGTACCCATTGTGTCCATCAAATTGCAAATCTTTACGTTGAGACATTTTA
ATTATTTCAACTATGGCATCCTCGAATGCTTTTCGATTTCCTTTATCTTTACAAGAAATT
TTTAAAGTATAAATAGTTTCAGCAGCAGTACGAAAATCTTTTTGTAAAATTATTTTACCG
GTCCATGGTTCAATTTCAAAATAACCATCTCCGCCACTTTCAAGTTTAAACATTATGCGG
GAATTTTCACCTTCATCTCGGTCAAACGCTTTTATTTGCAAAACTTTTGAGCCTGGTGTC
ATTTCTGGACCTATGCTAGCGACATATCTTCTAGGATAAAACACCGGATCGTTGTCATTA
ATATCCAAAACTTTTAAATACACCGTCGCTGTTGAAGATTGTGGTGGAAAGCCTTGGTCT
TTTGCAAGCACTTGCAATTCATACATTGCTACCTTTTCTCTGTCTAGCTCAGTGACTGTA
CTCAGCTGTCCTGTGATTGGGTCTAGCACAAATGTATTTGGGTACTTTCTTTCCATACTC
GGTGGTAAATAGTAAGACACCGAACCATTAGTACCTTGATCATAATCTGATGCTGTAAGA
ATCAATATTTCCTTAATAGGCTTTATATTTTCCGGAAGGGTCGCATTTATTTGACTTTGT
GGAAAACTCGGGGCTTCGTCGTTTTCATCGAGTATTGTCACTTTCAATCTTGTATATGCC
CATTTCGGATTCGGACCACCGTCTCTAGCGGAAACATTTAATTCTACTGATCCTTGAACT
TCCCGATCTAAAATGGTCTTTGTTGTAACCAATCCAGTTAAATGATCAATTTCAAACCAG
TGCTGCTGATTTCCGTCATAGAAGTCATAGTATATTTCAGCGTTAACTCCAGTGTCTTCG
TCTGTGGCGGTAATACTAGCAACGTACGATCCAGGCGGAGCAAGTTCTGTTAGAATAGTA
GAATATTCTGATTTCTCGAATACAGGCTCATGATCATTAACGTCGTTCACATGAATGACC
AAGAACGAGGTGGTCGTCCGCGGGGGAGAGCCGCGATCAGTAGCAACAACAGTTAAATTG
TACTTACTTATTTCTTCTCTATCCAATATGCCATTAACATGAACTATGTACACACTAGAA
GAATTCTCCAAACGAAAATGATTGAGTTCATTACCAGCCACTATACTGATGCTAGTTATG
CCATTCAAGCCGGCATCCAAATCAGTAACAGTGATGGCGGCAACAAGTGACCCATTCTTG
GCATTTTCATCGACTGTAGCAAAATTTGCGGTCGGTGGTACATATGTGAACGTAATAATT
GGATTGTGGTCGTTGGCGTCAATGAGGTTGACAGTGACATAAGTCCGGGCATCTTGTCGT
GGTACACCGTGATCTTTAGCTATGACTGTCAATACACATGTCATGTTACATGTAGCATTA
CTACAATATTTAGGACAGTTTAATATTCTACTAGTTGTTATCACGCCCGATTCAGGATCT
ACGGCGAACTGTTTTTCTGTGTCCATGACCTCGTACGTAATTTTACTATTGTCTCCTAAA
TCATTATCAGTGGCTGTTACTTTTAAGACAGTGGTTCCAGGAGGCACGCTCTCATTCAAC
GACACAGAGAAATCACTTTGGTCGAATATAGGCGGGTTGTCGTTTACATCCAATATGCTA
ACATTCACTTGAAGGTATCCAAATTTCGGAGGATTACCGCCATCGCGGGCAGAGATGTTT
AACACGTAAAAATCTGTTGTTTCTCTGTCTAGTTTTCCTGTAGTTTCTAAATGCAAATAA
GAAGTCTGACCGCTCGGATTAACGGTAACGTTCAGTCTAAATTTCCCTTCAGTGTCGCCG
TCTATTATTCTGTAGTCATTAGTGATACCATTCTCACCTAAATCCTTATCAGTCGCTGCA
TCGAGAAGAAGCTTAGTTCCCGCAGCTGTACTTTCCGATAACGTCACACCGATACTAGGT
TCCGGGAACTCTGGGTAATTATCGTTTACATCCGTTACCCTTAATCGCACTTCTATAGGA
TACGTGGGCTGACTTGAGAGCACCACGAACGCATAGCGATCAACAGTTTCCCGGTCCAGC
ACTACATTCGTCCTTATCTCGCCAGATACAGGGTCGAGAACAAATTCTTTGGGAGGCTCA
TTAAAACGGTACGTGAAGCCAGGCTTAATTGGAATCCTACCGACAAGAGTACCGATCGGT
TGATCCTCGGGGACTCGAAGATCGA
(6745 bp)

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