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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13918_c4_seq2
Scaffold_idBomo_Scaf011
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-16_isoform_X2_[Papilio_xuthus]
Ontology
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031313 C extrinsic component of endosome membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0045022 P early endosome to late endosome transport
Transcript
Level		FPKM:15.08 TPM:15.17
ORF EntryO_BomoSK16725_complete:A_BomoSK_comp13918_c4_seq2
Sequence
(Nucleotide)
GGTAAAACGTCGTGATTTATTTTCGTAAATTTGTTTATTTTTTTAACAGTGACGCGAACA
GATGTGTGTATACCATATTGAATGCGTTGATCCGTAATTTTCCAAACTTAATAATGTCAA
CACATTTGTCGGCAAGTGTACAGGGATTTGTAATAAAGAAAGTTGATCGGAAGCTCTAGA
TAACAAAAAAAAAAGAAAACAAAAAAAGTTATTGTGACCGAATTTCGTAAATTAATTCCA
GTGGGTGTGCTATAAAAGATAGAACGTAAGCGTAAAGGATATGCATCATTGACATTAAAA
GCACCGAACCGCAATGGACATAGTGCAAAACATCAACCTTCAAAGTCGCGACGCAATGAA
CAACGACGTATCGTCCGCATCGAGCGAAGACAACACCACGTTCGGCAAGATCAGGCGTTA
CTACAAGAACCGACGGGACTCGACTTCCGACAGCGAGATGCCAGTTCGTCCTCAAAGAAT
GCACAAGAGCATGCATAACTTGCACGAGAACCAGAGGAACGATTACACCCGAAGCCTGTC
TTCGATACAGAACAGCATCAGCAACATCGACTTGAGCCTCCACCGGGCCGAGATCAAGAA
GTTCGATAAGCTCCAGATTCCCATTGTCGGCTACGAAGTGATGGAGGAGAGGGCCAGGTT
CACGATATACAAGCTCAAAGTCGAGGACGACAAACGCGATCAATCGTGGTTAGTTTTCAG
AAGGTACACAGACTTCGTCAGGCTGTACACTAGATTGAAATCGGAGCAGCCCAATATCGA
ACTGCCTCTTCCCGGGAAAAGGTGGTTCCGCGACAATTTCGAGCCGACATTCCTGGAAGA
AAGAGTCCGCGGCCTGCAGACATTCGTCAACGTCATACTGTACAAGCTACCGAATAATCC
AATAGTGAGGGAATTCTTTTGCCTGGACGAACCGCCCCAGGACTTCAGCTATCAACCCGA
AGTTCAAGCTGTTTATGGGGCTCTAGAAGATTCTATAACGTCCCTCAGAATGCAGCTGAA
ACAGAAGGACGCGACCATAATGCACCTGCAGAAACGCTTGGCGCTTTTGGAGGGCACCAT
CGGACAATGCGGTAACTGTAGTACAAAAATAAATAACATTAGTATTTACTAGATTAGGAA
ATTTCATCATACATTATACTGGCCCTCGGGGTTCAAGTATTTCGAATAATTGACCGAAAC
AAGATTTAAGGGTTGCACCCGCAATGTATAACTAATGAATGTGGGTTCGTTGACCCCGCT
CACACGAGGTCATTGTTCGCGCGCGAACACGCCGGCCCTCGCATCCGTCCACATTTTTTT
AGATGACGCGTATTTGCCCCAAACGCCTTTATGAACAGGGTATGAAATTAATAAATTTTT
TTTCTCGTTATTAAAAAGGCCGTATTTTTTTTAAAGCTTGCAATAATAGTTATTATTTGT
TTTACCAAAACTTAGGTGCTAAGTTTTTCTTTTTACATTTAAATGCATTTAATCTGTGCG
TATATGTATATATTTAAGGCTAGAAGTCTATCGGAGATTACTGCATTCATAATTTTTTTA
AGTTTTCTTATTATTGTCTATTCTAAAGAGAGTATTAGTTTTGTTTACAAAAGCATTCGA
TAGATGGCGTTGTTCGATATCTGAATCGCGCTATGGTTATGTTACGCTGCTTAATAATTA
AAATTAATTTCCAAGTTATTGTTTCGGGGATGGAGATAGCTTGATTAATTGCAATGTTAT
GAAGTTGAAACTTAACGTTTTTTTTTACTCGTAAGTAGCCTTCAAGGGCTATTCGGACTT
CGCCCTAAACGTGGTGGGGCGAAGCTTACTCGTCTTCGTCTGAAACGGTTTTCTAACACT
GGCCCTAGCAATGGCAGTGCTTCGCTGAATCTACCGCCGGATCGGAATCGCGACCCACTG
CGAAGATCCGGCGAGAAACTTAGCAGGCTGAAGCTTAGGTTAGGTTTCACGTCGAACTCT
TTATCGAGTTCGACGAGTACGGTTAC
(2006 bp)

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