SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13918_c4_seq1
Scaffold_idBomo_Scaf005
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-16_isoform_X2_[Papilio_xuthus]
Ontology
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031313 C extrinsic component of endosome membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0045022 P early endosome to late endosome transport
Transcript
Level		FPKM:1.36 TPM:1.37
ORF EntryO_BomoSK16724_complete:A_BomoSK_comp13918_c4_seq1
Sequence
(Nucleotide)
CGTAAAGGATATGCATCATTGACGTAAGTGATTTGTATAATTAGATTCGAAGGTCGTGCA
CTTCTTCGCGCTTATGGAAGCCTAGTACTGAACACTAGTATATTTTTTTCCAAAACTTGA
CATAATTTACCGTAATTTATCCCATAGAGTACACAAGATTAAAAGCACCGAACCGCAATG
GACATAGTGCAAAACATCAACCTTCAAAGTCGCGACGCAATGAACAACGACGTATCGTCC
GCATCGAGCGAAGACAACACCACGTTCGGCAAGATCAGGCGTTACTACAAGAACCGACGG
GACTCGACTTCCGACAGCGAGATGCCAGTTCGTCCTCAAAGAATGCACAAGAGCATGCAT
AACTTGCACGAGAACCAGAGGAACGATTACACCCGAAGCCTGTCTTCGATACAGAACAGC
ATCAGCAACATCGACTTGAGCCTCCACCGGGCCGAGATCAAGAAGTTCGATAAGCTCCAG
ATTCCCATTGTCGGCTACGAAGTGATGGAGGAGAGGGCCAGGTTCACGATATACAAGCTC
AAAGTCGAGGACGACAAACGCGATCAATCGTGGTTAGTTTTCAGAAGGTACACAGACTTC
GTCAGGCTGTACACTAGATTGAAATCGGAGCAGCCCAATATCGAACTGCCTCTTCCCGGG
AAAAGGTGGTTCCGCGACAATTTCGAGCCGACATTCCTGGAAGAAAGAGTCCGCGGCCTG
CAGACATTCGTCAACGTCATACTGTACAAGCTACCGAATAATCCAATAGTGAGGGAATTC
TTTTGCCTGGACGAACCGCCCCAGGACTTCAGCTATCAACCCGAAGTTCAAGCTGTTTAT
GGGGCTCTAGAAGATTCTATAACGTCCCTCAGAATGCAGCTGAAACAGAAGGACGCGACC
ATAATGCACCTGCAGAAACGCTTGGCGCTTTTGGAGGGCACCATCGGACAATGCGGTAAC
TGTAGTACAAAAATAAATAACATTAGTATTTACTAGATTAGGAAATTTCATCATACATTA
TACTGGCCCTCGGGGTTCAAGTATTTCGAATAATTGACCGAAACAAGATTTAAGGGTTGC
ACCCGCAATGTATAACTAATGAATGTGGGTTCGTTGACCCCGCTCACACGAGGTCATTGT
TCGCGCGCGAACACGCCGGCCCTCGCATCCGTCCACATTTTTTTAGATGACGCGTATTTG
CCCCAAACGCCTTTATGAACAGGGTATGAAATTAATAAATTTTTTTTCTCGTTATTAAAA
AGGCCGTATTTTTTTTAAAGCTTGCAATAATAGTTATTATTTGTTTTACCAAAACTTAGG
TGCTAAGTTTTTCTTTTTACATTTAAATGCATTTAATCTGTGCGTATATGTATATATTTA
AGGCTAGAAGTCTATCGGAGATTACTGCATTCATAATTTTTTTAAGTTTTCTTATTATTG
TCTATTCTAAAGAGAGTATTAGTTTTGTTTACAAAAGCATTCGATAGATGGCGTTGTTCG
ATATCTGAATCGCGCTATGGTTATGTTACGCTGCTTAATAATTAAAATTAATTTCCAAGT
TATTGTTTCGGGGATGGAGATAGCTTGATTAATTGCAATGTTATGAAGTTGAAACTTAAC
GTTTTTTTTTACTCGTAAGTAGCCTTCAAGGGCTATTCGGACTTCGCCCTAAACGTGGTG
GGGCGAAGCTTACTCGTCTTCGTCTGAAACGGTTTTCTAACACTGGCCCTAGCAATGGCA
GTGCTTCGCTGAATCTACCGCCGGATCGGAATCGCGACCCACTGCGAAGATCCGGCGAGA
AACTTAGCAGGCTGAAGCTTAGGTTAGGTTTCACGTCGAACTCTTTATCGAGTTCGACGA
GTACGGTTAC
(1870 bp)

- SilkBase 1999-2023 -