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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13916_c0_seq4
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_regulator_1-like,_partial_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
Transcript
Level		FPKM:2.95 TPM:2.97
ORF EntryO_BomoSK16716_5prime_partial:A_BomoSK_comp13916_c0_seq4
Sequence
(Nucleotide)
GCGCGCGTGCGCGTGGCGGTGCCGCACGAGCAGCGCGTGGCGTCGTTCCGCGCCATGCTG
CGCGAGAAGAACGTCTCCGCCTTCAGCACCTGGGACAAGGAGCTGCACAAGATCGTCTTC
GAGCCGCGCTACCTCGTGCTCAACTGCAAGGAGCGGCGCCAGATATTTAATCAGTACGTG
ACAGAACGCGCCGAGGAAGAGAGGAAGGAGAAGAAAAACCGATTGCTAGCAAAGAAGGCG
AACTTCAAGCAACTCTTGGACGAAGCCAAGCTTCATACAAAGTCCTCGTTCCTGGACTTC
TCCTCCAAGCACGGCCGAGACGAGCGGTTCAAGGCGATAGAGAAGCCGCGGGACAGGGAG
GTATACTTCAACGAGTACCTCGCCGAGATCAGGAAGAGGGACAAGGAGGAGAAGGAGCGG
AAGAGAGAACAGCGACGCGAGCGGATGTGGGTCGCGACGGTGCCCGCGGCGCGCCTAGTT
AGTGTGAGGTTTAGTAGTCCCGGTAGAGGGCGCGCGGGCAGGTCGCGGACACAGCCGCTC
CGTGCGGCGGCGGCGGGTCGGTAGCTCGCACTTACCTCCCGAGGCGACGTCGCTTCCGAA
GTCCCGCTTCTAACAGACGGTCGTATTACAGGACAGGCCAGGAACGTAACGGAACTAAAC
AATGTTAGATAAATGTATCGTCAAACGATGACGCCTTACCGACGAGCCTCCCTAAGGTTA
GAAAATATTTTAAGAAGAACAATTAGCGCCGAGCGGCGGCGCGCCCGACTCCAAGAACCA
CTCGCTTGTAATTAATTGTCCGTGAAATCATTCATTTAATGTCTTTGTCTTTTTATTTAG
AAGATCACCAGATGATTTCTACAAGTAAAGTTACAAATGGGTTTTTCTTTAATTTGGACC
GAGAAATCTTTTTTAATTATATAAAATCTCCTTCCCCTCTATAGTGTGGTTGAGCATGAT
CTCGGTTGCCAGTGTAACTTGGGAACCTACCGGGATGGTAGAATTATTTAAACAAGGAAA
GTGGTGACGGGTTACCAATTATAAATTATTTTTTTTTGGAACCACAGTAGTTATCTTGTC
TAATCATACTTAATAGATATTACTAATCACGATTTTTACTTTTCAGCTTATTTTAAACAG
TCCATCGAGAAGTTAAATAATATTAATTACTAAGATTCTGTAAATTTTTGAGATTTAATG
ACATATTATGATGTAGTGTTACCGACCTGTTGTCCAGCAGTGGGACTCTTCTTGTGGACC
AAATAGCTTCTTTTTGGACTTGAACATTATTTTATAAGATATAATATATATTTTGAATTA
AAAGTAGAGTCCCTTCAGGACATCATTGTTCTTAAATGTTTAAAGAAAATTGAAAGATAC
AGAAAGAATAAATTATTAAGAATAGTTAATAATAATTAGAAAGAAGAACAGTAAATTATT
TAAATTGTAAAATCGTTGAAAGAGTACTATAATTATAATACAACAATGAAGTAAGTTTTG
CAGAGTTCGTTAAAGAAAAGTAATGAATATTAAATGAAGGGATGGTCCGTATGAGCGAGC
ACGGGGGCCGTCAGGGCCCATAGACAACGCGCATGTTGTCCCCCCGCCCAGCCCCCCACT
TATCAACATGTCATCTTATAGGGGGGTCAAGCGGGGGGACAGGCTATCGACCTCAAAGTG
TACTGTCAGTACTGGCTCCACCCTGCCTGTGCGTCACAGCAGACAAATGAACATATCTGT
GAAACTGATTTCATTAGTGATGCAGGGGGGCGAGAGGGGGGCGTCCCCTCCGTCCGCACC
GACGCCACCTAATAACGTTTTCTTGCAGGTTCTAATGACATATTGTACATTGCAGGTTCC
ATAATGTTTATCTTTACATTTTCAGCTTCTAACCCTAATGATGAGTTCTCTTGCAGGCGG
TTGCTCGTATCGTTTATAAGCGACGTTTGCTCGCGGCTGGCGGGGGGCGGGGGGCGGGGG
TCCCGGACTGCTATGCGAATTGTTGAACCCACCCCCTCCTTATACCAACTCTCCCTCTTG
TTTATTTGTACAATCATGTTTCGTTTTGAACTATAAGAAATTGTTTGAAATTAGTTTATG
ACATTTCGAGATAAACTTATAGTAATACGCACGCTAGACCCCGCCGCGCCCAGAGGTCGA
CTCAGGACCCGTGTTTTAATGTTGAGCATTTAAAGTTACAGGCGATCTAATATAATGTTT
CGATATATAAGTATGCGAACGAATTAAATGTAATACAACATTAAAACAAAAAAGTAGATA
GTCAATAAAATTGATATTTAATATTGAGCTCCCGACCGGACCCCACGAGGGGGGGGCAGC
TCCCGTATCAAAAGGTATTCTCAATATCACCTAGAACAAACCAAGGAGAATATAGATGAA
CTGAGAACCTCTACCTTTTATTGAAATCTTTTAAAAATTGACGTCCAAAGCCGGGATCCG
TCGCCGCCCGGCCACCGCCACTTGGAACTGGTCTGTCTTATTCAATTTGTATAATCTCTT
TAGATAAATATGGCTATATTGAAACTTGTGAAAAATATCATTTGAATTGTCCCACTTCGG
CGTAAATAAATAAATAATTAAAATGTGCCTGTCCCCCCTCCGCGCCCCGGCCTCCAC
(2637 bp)

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