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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13896_c0_seq9
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_transcription_factor_Sp3-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001503 P ossification
GO:0001779 P natural killer cell differentiation
GO:0001889 P liver development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030183 P B cell differentiation
GO:0030217 P T cell differentiation
GO:0030218 P erythrocyte differentiation
GO:0030219 P megakaryocyte differentiation
GO:0030224 P monocyte differentiation
GO:0030324 P lung development
GO:0030851 P granulocyte differentiation
GO:0043353 P enucleate erythrocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0048706 P embryonic skeletal system development
GO:0060216 P definitive hemopoiesis
Transcript
Level		FPKM:0.41 TPM:0.41
ORF EntryO_BomoSK16615_complete:A_BomoSK_comp13896_c0_seq9
Sequence
(Nucleotide)
GTTTGGCGGCCGGTCGTGAGGATGGTGCGTTCTATACGTAGACAAAGAATTATTTTTGTT
TGCCATCATAAAGTAGATAATGTCGCCTGAGCCTACAAAAGTGCAGGTGGAATACATCAA
CGAGGAAAAACCTATAAAGGAGGGCAGCGGCAGCCAGTCGCCCCTGGCCTTATTGGCTGC
TACTTGCAGTCGTCTCGGTGCTGCCAACATGGGGCCCGAACAGCAGCAGTCAGATAAAGA
GCAGCAACATCACTTCAGTCCACAACAACAACAGACACAACAGCAGCAAGTGCAACAGGC
ACAGCAACAGCAACAAGTGCAGCAACAGCAAGTGCAACAACAGGTTCAACAACAGCAAGT
GCAACAGCAACAAGTACAACAACAACAAGTGCAACAACAACAAGTTCAGCAACAGCAAGT
GCAACAGGCACAACTTATACAACAACAAGTGCAAGGTGACGCAGCAACAATAGCTGCAAT
ACAACAACAGTATTTACAACAACAGCAGCAGCAGCCGCAGTTAAGGGTTATTAGTTCTGC
TGTAGTGCAGCAGTTGCGAGCTCAAGGATTATCAGGCAATGAGTTGTCGGCGGCTATTGT
GAATGCCGCGAACAGTGTTCCGAATGGCATTCAAGTTCAGCAGCCACAGGTTATTTCTAT
GCAGCAGCTGCAGTCGCTACTGGGCGGCGGCGTGGTGCCGAACGAAGGTGCTACATATCA
GAACTCACCGCAACAACTCTTGCAAATACATCCGCAACTGTTGCAGCAACAACCGGGCGG
AGTGTACGGCGGTTGCCTGGTGGGCGGCGTGGCTCCCATGCAAGCCGTCACCGTCGACGG
GCAGGATGCTCTCTTCATACCAGCGCAACACGCTCAGAACTTCTCCGGTATGGGACAAGT
CAGTCTCGTGAACGGACAGCTGGTCAGAACGCCGGTACTGCCGGCTGGCTTCCTGCAAAA
CGTCATGCATCTACCAACAGGAGGCGGCGTGGCGGTCCGCGGGGGTATGGTGCCCGTGCA
GGTGCCGGTCAGTGCCAACGGGCACACGGTGTACCAGACGCTGCATCTGCCACTGCACGC
CGCGCACCACGCGCCGCACCATCTCCAGATCATACCGCAGCTGCAGCAGATGCAAGCGCA
GCCGCAAGTGGCGAACGTCCTGACGCCGTCCGGTCAGATTCAGCAGATACAAATAGCATC
GTTGGGTAATCAAGGGGCTGGCACACAGGCGGCCGTGAGTTCGGCCTCCACACCTACCAC
GATAACACTGCAGGTGCCAACCCTAGGCGTGGGTGGAGTAGGCGGCGCTGTTCAATTAGT
ACCAGCCCTGGGACTGCCGGGTGTTCAGTTCGCGCAGATACAACAACAACAACAACAACA
GCAACCGCAGCAGCAGACCGTTAATATTGGGCAACAAATCCAGCAAGATCCAAATGAGCC
GGGCAAGTGGCAGGTGGTGACTGTCAGTACGGCAAGCAGTACTGCAGCATCACCTCAAGA
GTGTGAAGCAGCCAAACAAAGAGCAGAAAGCCCCAACTCTTCAAAAAAACACATGAAGCG
AGTAGCTTGCACCTGTCCTAACTGTGATCAGGGAGAGAATCGTGTTGTCGACCGCAAGAA
ACAGCATGTGTGTCACATTGCTGGCTGCAACAAGGTATATGGAAAGACATCTCATTTACG
AGCTCATCTCCGTTGGCATTCTGGAGAGAGACCCTTCTTGTGCAATTGGCTGTTTTGTGG
AAAAAGGTTCACCAGATCGGATGAATTGCAAAGGCATCGTAGAACACACACAGGGGAGAA
ACGGTTTGAATGCCCCGAGTGCAGTAAACGTTTCATGAGGTCTGACCACCTTGCCAAACA
TGTTCGGATCCATACGAAAAATAGAATTACGGAAGTAGCAACATCGACACAATCAATGTA
CTCTGATTCAGGTGATGATAGTTCAGATGAGAAAATGATGTTGACTATAGAGACCATCCA
TCCTGAGGGAGAGAGTGAAGATAAGCTTGTCATGATCCGTCCTGGACCAAAGGTTGAACC
GGAACAACTGGACAGCTAGGACGAAGACAGCGACGAGTAAACGTCGTCGCTGTCAAAATA
AATAAAGTTAATACTACTGTGTAGTATGTTTAGACTTGCAGAACTTGAGGGAATCACATA
AACGATATTGTGAAACAGTGCACGCTTGTGGAATTTATGTTCTAGGCCAACAAGTCTTTA
GTACAACAAAACATTGTGTTCTCACGGTTAGCAGTTTATTGGTAATAAACTGTCTAATTA
ATTTGGTATAGTTGACAGTTTGGTATAGTATGGGCGACTTCTGCATTGAAATCGCATGCG
CAATACATACCCAATTTCCCAACTTAAAAGTGTTGAACTTGAGCTTAAACTTTAAATGTG
CTATCTGCTTAGCTTAAAATAAAGTACTACGAACCTGAAGTGAGTGTTAATAGAAAGTGC
ATCAGTTATGAAATAATCGTTTTTTTTTTATTAGCTCTTTGCTAACTGTAGTTTCATGAG
TGAAAATTTTAAAAAGTTGTGTTAAATTTTAATCGTTACGAAAGATTTATGTGTTAGTAT
GTTTTTTAAACATAAGCATGTATATAGATTACTCGAAATTCAATTTTTATTTTTGAATGA
AACGTGTACTGTTGCAATCTATTTATATGGAAAAGTCGTGCAAAATTTGGTGATATTAAA
TTTGACTGAAATAAGGGACTATTGAATGTTAATTGAATGATAAGGGGTTAAATTTAAAGT
ATTTCATAAGAGAGTAATAATAATAAAAATTGTAAATAAAATATTTTTGTCACTGAAACA
CTGGTAGAAGATGTCTGTAGTGGATTTAAAATGTATAATATTAAAAAAAAAAACATTTCC
ACAAGTAGCCAAAGTGTGGTAGTATTTTTAATGCTCTTTAGATTTAAGATATTTCGAGTA
AATAAAAATTCTGGAGAAAATAGTTTTAAGTAAACGCTGCAAAGTATTTTCGGAGTGTTA
AAAATTTTTCTTCATTTTTGAGGGATGAAAAAATATCAGATCGCCGATTATTTATGTACA
GCGTATCCATCTTATATAAGAATTATTTCGATAACAAATAATATGTTCATCTGTGATTCG
ATAATGAAATTTTGACAGGCCTGTCAGTGCTCATGTTCATAAGAAAATGGGAATGTATGT
AAATGCACAATGTTTATATGTATGATGTTATTTAGGTACTTAATAACAATTTTTTATTGA
GATTCAGGGCATTGAGTCATTTTAACTAACACACATTTTATGAGTATGTAAATAAACCAT
TACTGTAGCGCGTAATATGTGTCTGAAATAAACACTTATTTCATAGCAGATTAGTAATAA
ATATAAATAAACTTGGTTGCTACTGTATATTGTACTTTAAGATATTATTTCGAGATGTGA
CTTATTACTCGATTTTTACTAATCGACTTGTGTTTAATGCAAACATGTGTATACTTAGCT
TGTTCTTCTATATGTTCATATAAAATTTGTAGGGTTGATTCCATTTCAATTGGATTTAAT
CTAACTGTAAAATATATTCAGGCATTATATATGAGTGACAATCTGTCAGTTTTTTAACTA
CCAACTAATAATTATTTTCTGATAATGTGAATGGCAACCAGATCATTTTGCGGACGCTGA
AATATAATGATTCACTTTTAATATAAATATACGATTTACTTTTTTTATCCAATTTTATTC
ACATTAGTGAGGCCGACTAGTAACAGTAAATAATAAAACATTCCAAAACTACGAACTCTA
AAAAAAAAACAAAAAGAATTATAGGATTAATTCCGTCAAAGTTAAGTGTGCCTGCATGGT
GGACATAAATCACTTTTTTTGAAGCTATGATAGTGACATTTGCTGACATATTTAATGTTA
GAGTTTGCACGATGTTTATTATTAGTTTTTATTTACGAACACACACAATAACCCATACTA
ACCTTATGTAATAAAACCTGTATGTACTAATTTAGTGCTCAGTGTTCTTGTTGAAAGATC
GGCAGTATATCCCCACTTTATTTAACAAGCACTTGACGCTTGTTGATTATATAAAAGACC
TGCAGCCGTTAAAAATTGAAATGCAATAAAATAGTTCGTCTTGAAAAAAATATTATGTTA
TTAAATCAAGCTGCACTACGTATAAAAATTGTTATTGAACTAATATTTGTTTTCCATATG
CATTGGATAAAAATAGTAAATGCTTAAGTACAAGCAAAAGTGTGAGCCGGTTACTGTTGT
TTTAATATTTACATATGTCTCTTTACATCGAATCATGTGGTGGGTCCAAATTTATAAACG
AATCTGGCTAATTATATATTGAATGTAAATAAAATTAATTAACAAAACATCAGGAACGCA
TTAATTTTCTCTAAGCTGTGTATATGAATTATGCTAAACGTGTAAGTGTAAAAATGGTTT
TATTGTTGGAC
(4451 bp)

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