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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13878_c0_seq3
Scaffold_idBomo_Scaf005
NCBI non-redundant
(nr)		LIM_and_SH3_domain_protein_Lasp_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
Transcript
Level		FPKM:11.57 TPM:11.64
ORF EntryO_BomoSK16536_complete:A_BomoSK_comp13878_c0_seq3
Sequence
(Nucleotide)
AAGTGCAAATCTAGATTTTTTTTTAATAATATTAATGCTGTAACTGATGTAACTGTTTAG
ACTCCGGACGAAGTATTTATTATTATTTTCAATAAACAAACATAGTTACAAGTACCAATT
ATAAATAATAGTTCTCATAAGGCCGGCATTTTTTTTTAATTATTCTTAAAGATTAAAAAA
GATGAAAAACATGCAAAATCTAAATCAATTGGTAATGAATATTTTTTGAAGTGTTTTTAT
CAGTGAGTGGATCGTCCTAATTCAATTGTATTGCCGTAATGCAGACGCCGGTGCGGTCTC
GACGTAGTTGGCTGGCAGCATGCCCGCCATGCCGGTGCGTACCACCTGACCCATCATCCA
GCCCTCGTCTATAGCACTTACATTCATTATGAGGTCGCCTTCACGGAACGACACCTCATC
ACTGTCGTTGGCTTCGTAATCATACATTGCTATGTACACTTGCGGATTCTGTGAGCTAGC
CGGTCTCTGAACTTCATTGGCCAACGGATCCAGATCGGTTACGCGACCGATCTGCCTTGA
CTGCTGATGTTGTGTTTGATGACTGCTACCTCTTTGCTTTCCATCGTTTGTGCTGTTATA
GATGACGGTGGCGGAGGCCCTTTGCGTATTCGGAGGAGCCCTAGGCCCGTCGCTCAACGG
ATCGTAATCCTGAATCCTACCGATCTTGGGCTGACCAGAGGATCCGTAATTCTGGGCGTA
TTGCCCATAATATTGACCCTGGTAATCTTGGTATTGGTATCCGATATCCTCTTTGGGCTG
ATAGTATTGTTCTGGGTAACGATTTTGCGGGATTGTGGAATTGTGAGTTTGCTGATAATG
GGAAACTGGTTGGCTGTGTTGGGGTAGGGTTTGGCTGTGCTGGGGTGCATTTTGAGCGTG
TTGGGGTACGTTTTGGGTGTGATGGGAAACGTTCTGAGCGTGGGGGTTTTGGGGGTAATG
GGGCAGACTCTGTCCGTGCTGCGACATACTTTGGTTGTTCGATAGATTCTGGTTGTGATT
GGGTAGAGGTTGGGTGTAGTGTTGTTGGCTATGCCCGGAATGGGTCTGGTGTTGGGTGGT
CGGGATCTGATAGTGGTTTTTGGGGGGTAGGTTCGGGGGGGGCACGTTAGGCTGTAGCAT
TTCGTTCGCGTAATTGTCTATCTGCTGATGGTAATTATCCGGCGGCGGCACATCCACTAT
TTCTCCGTTTTCGTTGATCTGCCTCTGCCTCTCCATCTGGGCTTTCTTCTCGAGATCGCC
GTGGTAAGCCACGTTACTTATGATCTTCGTGTTCGCTTTGATCCTTAGGGTCTCAGGATC
GTCTGCCACCTGTGTGAATTTCCCTTTACTCCTCTCGAAGTCGGCGTGGTACTTCACGTT
GCTCTGTAGTTTCGTGTTTTCGGCGATCCGTTTCAGTTCAGGTGTTTCGGCCATTGTCGT
CGGTTTCGCTTTCGGTACGTGAGCTTCACAATAAGGCAGCTTCCCGTAGCCCTTGTACGT
TCTCATGTTCAAGGTCATACTGCACTCTTGGCATTTGAAGCAGCCCT
(1547 bp)

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