SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13869_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_eukaryotic_translation_initiation_factor_2_alpha_subunit_isoform_X1_[Bombyx_mori]
Ontology
GO:0000022 P mitotic spindle elongation
GO:0000049 F tRNA binding
GO:0001677 P formation of translation initiation ternary complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0005875 C microtubule associated complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0007052 P mitotic spindle organization
GO:0033290 C eukaryotic 48S preinitiation complex
GO:0043022 F ribosome binding
GO:0043614 C multi-eIF complex
Transcript
Level		FPKM:24.31 TPM:24.45
ORF EntryO_BomoSK16491_5prime_partial:A_BomoSK_comp13869_c0_seq1
Sequence
(Nucleotide)
CAGAAGGACATGAAGTAAACGCTGAATTTCGTCAACGTGAACAAGTTGACTGTTTCATCA
TATTCTTTCTTTATCTAATATTTAACAGACAAAAACGAATTAAATAAACACACAAGATGC
CGTTGTCGTGTCGATTTTATCAAGAGAAATATCCGGAAGTTGAAGATGTGGTGATGGTGA
ACGTTAGATCCATCGCAGAGATGGGAGCATACGTCCACCTTCTAGAATACAATAATATAG
AGGGCATGATCTTGCTATCTGAGCTTTCCAGAAGACGTATCAGATCCATTAACAAATTGA
TCCGAGTGGGAAAGACTGAACCGGTTGTCGTAATCAGAGTGGACAAAGAAAAAGGATACA
TAGACTTATCGAAACGTCGTGTATCTGCTGAAGATATATACAAGTGCACAGAACGCTACG
CAAAAGCAAAAGCAGTAAACTCGATCCTGCGACATGTAGCAGAGCTCCTCCATTATGAAA
CTTCTGAGCAATTGGAAGAACTTTATAAAAAAACAGCTTGGTACTTTGAAGAGAAATATA
AGAAGAAAGCCTCAGCATATGACTTCTTCAAACAAGCAGCTGTAGACCCATCAGTACTCG
ATGAATGTGGCTTAGATGAAGAAACCAAGGATGTCCTCTTAGCTAATATTAAAAGGAAAC
TGACCTCGCAAGCAGTGAAGATTCGTGCTGACATTGAGTGTGCTTGCTATGGTTATGAAG
GCATTGATGCTGTACGAGCAGCTTTGAAAGCTGGTCTAGCTCTGTCTACAGTGGACATGC
CAATCAAAATTAATCTTATTGCCCCACCTTTGTATGTAATGACTACCTCAACTCCTGAGA
AGACTGACGGTCTCAAAGCATTACAAGACGCAATCGACAAAATTCAAGAGAACATCACAG
AAGCAGGTGGAGTCTTCAACATTCAGATGGCGCCTAAAGTTGTGACAGCGACAGACGAGG
CCGAGTTGGCTCGACAAATGGAACGCGCTGAGGCTGAAAACGCTGAAGTCGCTGGTGATT
CTGCCGAGGAAGACGAGGATCAAGGTATGGGCGATGCTAACATGGATGGTGAACCGCAAC
AGAACGGCGCTTCGGACGAAGAAGACGACAATTGATAATAAAACTTTAATATCATAATAA
ATGGTACTCTGTAATCTAACGTGTTTCAAATGTAATATAAAAATAAAACAAGTTTTATAC
AAATCAAAAAAAAA
(1214 bp)

- SilkBase 1999-2023 -