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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13853_c0_seq3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_low-density_lipoprotein_receptor-related_protein_2_[Papilio_xuthus]
Ontology
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
Transcript
Level		FPKM:33.61 TPM:33.81
ORF EntryO_BomoSK16318_complete:A_BomoSK_comp13853_c0_seq3
Sequence
(Nucleotide)
GCCCGGCACCACGAGGCACAGGTGCGAGCACGCCGCGCGCGAGCACGCCGTCAGCGCCGA
CACGTTGTACCGGAGGGGGTGGTATACTTTGACTCCAGACGGGTTCACGAGATCTCGAGA
TATAACAAAAGCGACGCCTCGACCAAACTTATCCTGTCGCAGCAGCTCCCCGGTGTCCCT
GGTGACCCAATACAACGAGGACTCGAACACGTCCAGTGATAGCGGATGCCGCAGCAGATC
TCCCTTGAGGATGACCCGACGCTGGGAGCCGTCGTGACGCATCATCTCAATAGTGTTCAG
CTTAGTGTCTGCCCAGTAGACAGCGCGATCCATGGCGTGGTCGATGACGAGGCCTGTGGG
ATGGCGGATGTTCTCGGTGACGAGCGGCCGCCGCTTGGAGCCGTCCATCCAGGCGATCTC
TATTTTGGGTGCGGTACCGGCGTCTGCCCACAGGATGCGTCCGGCTCTCGCGTCGAGCGC
CAGCGCCGTGGGGGACTCCAGCCCTGCGGCCACCAGCACGCGGCGGTACCGCCCGTCCGT
CCGCGCCACCAGCACGCGACCTCGGGGCTTGGACCCGAGTCGCTCCACCTCCGTCCAGTA
GAGGTTGTCTCCCACGTAGTCCACGGCGAGGGCGGTCGGCTTAGAGTTACCCTTCATGTT
CAAATCCTGCGCGAATCCAATTTTGACGGCGCCGTTCATCGCGTTCACCATGTAGGATCG
CTTGATCGTCTTGTCGTAGCTGTCCGCCCAAAATATCATTTCGTTAACCGGGTCGTAGTC
GATGGCTTCGATCCTCTTCTCGGAGGTGATCACGTCGAACTGCTCATTCTTGCTCTGTGC
AAAGGCTCGGATCTCTGGGCCGTTCGAGTATAACAGGACGACGTCATCCTTCGTCGCCTT
GCACACTCCAGACAGACTGTCGGCGAGTTGGAACCCTTCTCGACAAGAACAGCTAAAACT
TCCGTTGAGGTTGGTACAGAGATGGGAGCAGTGGTGGAGGCCAGCAGAGCACTCGTCCAG
ATCCACGCAGCGCTTGGGGTCGGCGGACGAAATGATCCAGCCCTGGAAGCACGTACAGAT
GTACCCGCCGTTGCTGGACGTCAAGTTCGTGCAGAACTGCTCGCACCCACCTTTATCTAG
ATGTGAGCAGGAGCGCTCGTGATGGCAGCCCAGCTCGTCGGAGCCGTCCCCGCAGTCGTC
GCCCAGGTCGCACAGGCGGCGCCGCTCCACGCACTGCTTGTTGGCGCACTGGAACTGCGT
GAGCGGCTCGCAGGGGCGCGCGCGGCTGGCGCACAGCGTCATGTTGTTCTCGTCCGAGCC
GTCGCCGCAGTTGTCCACGCCGTCGCACACCTGGTACCTGGGTACGCAGCGGTGGTTGTC
GCAGTGGAAGCGGCGAAGGGTGTCGCAGTTGAAGTTGTTGCAGATGTCGGGCGTCTCGTC
CGAGCCGTCCCCGCAGTCGTCCGTGCCGTCGCACAGGTCCGACTGCGACACGCACAGGGT
ATTGCCGCATTGGAATTTATTTTCGGGACAATATCTGCCGCCGGGAAACTTAGGTGGACA
GCCAATCTCGTCGGAGAGGTCCCGACAGTCTCGGTCGCCGTCGCAGCGGAAGTGCGCCGC
GATGCAATGGCCGGAGCGGCACTGGAACGTTCCGTTCTTGCACTGGAAGCCCCCGCAGTC
CGTCTCGTCCGAGTTATCGCCGCAGTCGTCCTCGTGGTCGCATCTCCATCTCGAGGATAT
GCACTTGCCACTGCCACACTTGAACTCGGACTCGGAGCACTCTCTGTATTTGCTCTGACA
GAGAGCTTCGGTTTCATCGCTGCCGTCGCCGCAGTCGTCGGTAAAGTCACAGAGCCATTG
TTTCGGTATGCATCTTTTGTTGTCGCACGTAAAGTCAGTCTCGGCAGCGCAAGTTGGACA
GTTTTCGGCTAGTTCGTCTGAACCATCTCTGCAATCGTCTTTTCCATCGCAGAACAACCA
CTTAGGAATACACCTGTAGTTGGACTGTCCGGGACACCGGCGCCATCCGGTGGTGCAGTT
CTTCTGTCGGCACATGTAGGCGGGCTCATCGGAGTCGTCGCCGCAGTCGTTATCGAAGTC
GCACATCCACAGTTTCGGAATGCAGCGACCATTCTTGCACGAAAATTCAGTGTCGGGATT
ACAAGTTCTATTGTGACACATCGCCGGGTCCTCGTCACTGTTATCCTTGCAGTCGGTGTC
TCCGTCACACTTCCAACTGTCCAATATGCACCTGCCACTATGTTTGCACTTAAACTCGAG
AGACGGACAATTGTGTGCGCATTCTGCTTCGTCGCTGCCGTCACCGCAGTCGTCCGTCCC
GTCACAAATAGTGGCCGCAGGGGTACAGTTAGTATTCTTGCACTGGAAGGAGCCAGCTCT
GCAGTGTCTCACCGGGCAGGTGTCGGGTTCGTCGGAACCGTCTTTGCAATCTTTTTCTCC
ATCACATTTCCAGAACCATGGGATACATTTTTCGTCGCGACCGTTACACCTGTGTTGTCC
ATCGGTGCAATTGACTATGCAAGTCTTCATGTCTCTAGCTAAGTAGAACTGATTCGGACA
GTCGCATTTGTATGTGGTGGCACCTTCCTCGCCATAACCTTCAATATTTAGATAACTCGA
CTCGTGCGGAGGAGCGATCAGACAGAGATGAGAGCAGCCTCCATTGTTATCGCCGCAAGG
ATTAGGATAAGGCAGTTGTCGCAGAGGGTGCACTACGTGGATATCGTATGGTCTGTGGGT
GGTATTTCTTAAAACCGTCAAGTTCTCGCCGGAATGCTTGTTAGCTTTTCTTATAGCTTT
CAAATTCCAGTCAGTCCAATAAATATCGTCATCGAACAAGCTGAGAGCAAAAACATGAGG
TACGGACTTTCCAGAGAGCACCACGTGTCTGTGTCTACCCTCTAAATCGGCTGACCCGAT
ATAGTCCAAGTGAGCGTCGGCCCAATAAATCCTGTCTGTGAAGTAATCGATGGTCAGCGC
ATTAGGCCAGGCGATGTCGTCGTCCCAGTTCAAAATCATAGTGAAGTTTGATCCGTCCAT
GCCCATCTTTCCAATGTACGCTTGCAGATGCCAAGACGTAAAGTATAGATAGCCAGTTCC
TGGATGGACAACTATAGCTCTGGGATCGGCGATTCCGGTTTTAAGCGTCTTCCGTCTCGT
TCCGTCTAATTCGGAGACGTCCAAGTTCTTAGAGTGTCTGTCAAGCCAGTACAACTTTCT
TCCGATCCAATCAACCGCGATACCTTCCAGTCCATGAGAGTCATGCCTAATCACGACTTC
CTTTGTGGGATTGGGGTCGGTGTAGTTAGATCTGTATATGGTCTTGGCGGAAACGTCAGC
AAAGTACATCTGTTCTTCTTTTATATCGAAGTCTATGGCGACAACGTTCATTAGGTCCTG
ATGAACCAGATTGTACAGAGATGCGTCCGTAGACATGTTTCTCACGTAGTACTTATTTGT
GAATATGACCCATGGCGGTATCTTATCTCTTCTCTTGCAGGTGTGTTCGTCAGCCTCTCT
CTCATAGTATTGATCATTACACTTGCAATAATAAGAGCCAGGAGTGTTAGAGCAGTACTG
GGAGCAGACGCCTGGAGTCTCTATACACTCGTCGATATCTGCACATGCTTTGCCGTCAGT
GAGGAGTTTGTAGCCCTGGTTGCAGTCGCAGTAGTAGCTGGTGAGAGTGTCGATGCACTT
ATGCCCGCACTGGTTAATCTCCAGCTTAGCACACTCGTCGACGTTGCAGTGGGCCGGCTC
GTCGGAGTCATCGCTGCAGTCTGACACCTTATTGCAAACGAGGCTGTAATCGATGCACTG
GTCGTTGTTACACTTGAACTGTCCTGTCGGACACGTTTTATTTTGTTTGACGCAGCCGAC
CTCGTCTGAGTGATCACCGCAGTCGTCTTCGCCATCGCATCTGAAGTGGTTCCTAACGCA
TTTAAAATTTTGACACTTGAATTCCTGGTCCGTACACTGTTTGTATTGCGTATTGCAATG
TTTTCCTTCATCGGAGCCATCTCCGCAGTCATTGTCGTGATCGCAGACCCAGCCTCGGTT
GATACAGCGGCCGTTGTTGCACTGGAATTGATCGTCGGTGCACGGCGTTGGAGTGGAGCA
GTGGTGGATGGTAGAGTTTTCATCAGCGCCATCAATACAGTCCGGATCACCATCACACAG
CCACTTCTTGGGTATACACTGCGCCCTTCCCCAGGCCTTGTTCTCTTCGCAGGTGTACTC
GGTTTCCGCATCGCACTTACGTTCGTTGCACTGATGGCGGTCGTCTTCGTCACTGTTGTC
AAGGCAATCGTTGTCACCGTCACAGATGTAGATCCGGGGAATGCAGTTTCCATTGTCACA
GGTGAAAAGGTCCCCGAAGCAGGTCCGGCCTTCCGAGCGGCAGTACTCGGGTGGTTCATC
GGCACCGTCACCACAATCGTCATCACCGTCGCAGTACCAAGTAGCAGGGATGCACCGATG
GTTCGGACAGCGGAAGCTGTTGGACGGACAAGTTCTTTGCGCGCAGTGGAGTGGATCCTC
GTCAGAGTTGTCACCGCAGTCATTGTCTCCATCACACAGCCAGTACGGTTCGACGCAGAT
GTTTGTCTTCTCGCACTTCAAGTGGTTAGTGGGACATGTTGTGTTCGTAGGACAGCGCTC
TTGCGTCTCGTCGCTGGTCACATTATCCTTGCAGTCGTTGATGCCGTTACAGACTTGTGA
CATGGGAATACAGCGAGAATTGAGGCAAGTAAATTCGCCATCAGCGCACGGCGGGAAGAC
GCAACCTTCTTCGTCAGAGCCGTCCTTACAGTCATTTTCGTGATCGCATTTCCAAGATTT
AAATATGCAACGTCCGTTATTACAGCGGAACTCATTTGGTGAACAAGAATGGTATGCGCA
GTAGTTCTTATCT
(4933 bp)

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