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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13839_c1_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_double-stranded_RNA-specific_editase_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0016553 P base conversion or substitution editing
GO:0016556 P mRNA modification
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0042803 F protein homodimerization activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0050685 P positive regulation of mRNA processing
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:2.59 TPM:2.60
ORF EntryO_BomoSK16245_complete:A_BomoSK_comp13839_c1_seq1
Sequence
(Nucleotide)
ACTGCCATCTAGCGAACATGCTCTGTTTGCACAGTAGTGAGGGCTGGCCATTCTCTAGCT
TCCCGGTTGTGGCATTCAATACTTCGGGGGCCGTGTTAGTGCACGCCCAGCAGACGCTGA
ACGACGGTGCTCTGGTTGGCGTCCTGGCTTCGGTGCTTGCTGCTCTCGCCAGCAGGGGCC
GCCGGAGATGGTAAGGGGGCGGCAGCGACGATATGTACGCTTCGATGCGCCCGCATATCG
CTCTGTACAAGTGGTGCGGGTGCAGCAGCGAGCCCAGCACTATCGAGGTCGGGTACACGG
GCGCCAGCAGCGTGGACATCAGCGAGCCCTGCAGGCCGAGGACGCACCAGCGGGCCACTT
TATCAGAACACGACATCGTCAGGAGGCGCTCGCCCTGCATAACACCGTCCCAGGTCTGCA
GCAAGCTGTTGCAGTTCTTCACCGGGATCGTACCCTCGCCCGACTCTATCTTCGTGCGGA
GCTGTCCCCGGGCCAACCTGTTGGGATGTCGGTCCGGCTCGTGCTGTAGCTGCTCGTGCG
GGCTGAATATCCGCCCGTCCCCGCAGGGCGCGGTGCTCACGTACATGTGTAGCTGCCGGT
CGGGGCGGAGTCGGTAGCCGCCCCCCTCCGCGGGCTCAATGTCCGCCTCGGGGATCGGCT
TGCGGGGGTCTTTTTGTGAGGCGTAAAGCAGCAGCTGGGTGTACAGGTGGCGTTGGAGGC
AGCGCCGGGCCGCCACCTCCGCGTGGCAGTCGTTGACGGCCCGGCCGCGCACCGACATGT
GCTCGCCGGAGACGCACTTGGTGCCCGTGCCCACCGCTATCCCCTTGGCACCGTCCGCCT
TACTGTCGGTCGTCATCACGATCCCGGCCAGGACCTTCCTCTTCGAATGTATGACGTCAT
TCTTCATCATCTCACTGAATTTGCTGTTCACGAGATTGGCTATGTGGTCGGCGAGGGTCT
GCGAGAGGTAGCCGGAGGGCAGCAGGCTGTCCGCGATGTCGGCGCGGCCCTCCTCCAGCA
CGGCCAGCGCGCTGCGGGCCGCCGCCAACTTCGCCAGCTTCTTGCTCGAACCATAACCCT
CGAACTTCTGTTCCTTGATCTGGCAGACAACCTTGAACCTCATGCTGTGGGCCAGCTGTA
GCGGAACCTGAGCAGAATCCAAGGGTGTTCCGTCCCCATAGGTACAGATGAACAGCAGCC
CCGGGTGGTTCTCGTAGAGGACATTGATGGGGCTCTTGGAGGCCGGGGTGGGGGCGGTGG
CGCCGAACAGCGACGACGTGGGCAGATTCCTCTCAATCTGACTCTGGGCTGTTTCCGTGA
CAGCGTTTTGCTTCGTCTGCTCTTCAATCTTCGATTTGCTCTCGAGACATTGGAATTCGG
AGACGGGATAAGGTGTTGTGTCGTCAACAGTGAAGTCCTTGGCGCGGGTCTGGTCTGGCA
GCACGTGGCCAGCTCGGGCGAGCAGAGCCGCGAGACAAACCCTGGCTGCGGACGCGCGTG
CCTCACGCTTACTGTGACCCCAACCTTCAAAGGTCATATCGGCGACAGTCATAGCAACTC
CAAAGACCGTCTTATTGGGAGTACTGAAGGTTCCTATTTCCTTGCATCGAAATCCGTGTG
GCGTTTCATTCAATATCATCACTGGATTCTTTTTATTTAAATCCTTACAGATCTTACTTA
TTGTTCTCTTATTTTTCTTCTTGGTAAGCTTTTTCATTTTATTTGGCATTTTGTCTGTTG
TCGATTAAATCAAATTCGTTAAATGCATTAAAAACTTTTTCAGTATGATTGCTATGAGCT
CTCCTTAGCACTTTATCAATCACTATTAATCAGTTTTTAATTGAGAGTGCTAAATTTTTT
AAGACTTAGTCCACCCATGGGCGAGCTTACAGCCAACCTTGCGGTAAGTTGTTACTCAGG
ATGTGTTGTAAGTATCATACAGTACAAGGTAATGAACCTATTAATTGCCTTACAACTATC
AACATTAGCTATCAACGGTTTCTTTTGTATTAGTAACCCTATACTAATCTCTTCATACTC
TTATGATATATAAGAGACCGTGACTAGGCCAGTCCGTGCTGAGTGGAAGTCTCAACTTTA
CCACAATAGTGTTAATTCATCTTAGACCATAGATTGGTCACTCTGCTGTTTTTAATTTAG
AGGGAAATCGTAGATGTAAACATTAAAAACTCGCAATTTAAAACTATAATCACAGAATTC
AAATAATTTTACAAATGCGAATTATACAACCCGAATAAGTCACACAAGGATTATTGCGAA
AAAAGCGCAACGAATTTTCGGCAATTTTCGTACTTCTAAAATGTTTTTTTTATTTTTATT
CATCGATATTAAACTTGAATTTCATGAAAGGTTCATTACACTGTTCACCACACACACAAG
TAAG
(2404 bp)

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