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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13835_c0_seq4
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_fibrillin-1-like_[Bombyx_mori]
Ontology
GO:0001501 P skeletal system development
GO:0001527 C microfibril
GO:0001656 P metanephros development
GO:0001822 P kidney development
GO:0005178 F integrin binding
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0007507 P heart development
GO:0022617 P extracellular matrix disassembly
GO:0030023 F extracellular matrix constituent conferring elasticity
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0032403 F protein-containing complex binding
GO:0035582 P sequestering of BMP in extracellular matrix
GO:0035583 P sequestering of TGFbeta in extracellular matrix
GO:0043010 P camera-type eye development
GO:0048048 P embryonic eye morphogenesis
GO:0048050 P post-embryonic eye morphogenesis
GO:0070062 C extracellular exosome
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:0090287 P regulation of cellular response to growth factor stimulus
GO:1990314 P cellular response to insulin-like growth factor stimulus
Transcript
Level		FPKM:4.45 TPM:4.48
ORF EntryO_BomoSK16230_complete:A_BomoSK_comp13835_c0_seq4
Sequence
(Nucleotide)
ACGACGGCAGGACGTGTCTAGATGAGGTTCAAGACTTATGTTACGAGAAATACGAAGAGG
GCCACTGCACGGGGCCGGGACAGAACGCGGTCACCAGGTCGCAGTGCTGCTGCAGCGCCA
CTAAAGGTCTAAAGCTAGGCTGGGGCGTGTCGTGCCAGGCGTGCCCGGCGCAGGGCAGCG
AGCTGTACGCGGTGCTGTGCCCCGAGGGACCCAGCAAGGACAACGGCGGCGCCGACATCA
ACGAGTGCACCGCGGTGCCCGGCGCCTGCCCGCACGGCTCCTGCGAGAACCTGGAGCCCG
GCTACCGATGCATCTGCGACCCCGGCTACCATCCAGACGCGGACGGACTGTGCCGGGACA
TCGACGAGTGCGATATGCACCAATCCTACTGCGCGGGCGGCCAGTGCCGCAACACGGCGG
GCAGCTTCACGTGCGTGTGTCCCGAGGGCACGCGCCACGAGCCCGAGCTGCAGCTGTGTC
GGGACATCGACGAGTGCGAGGGTGAGACTGAGACACATTACATCGAGTCCGACTATGAGC
GCGGCGACATACCCCCCACCTTCCCGACGAGGACAGAGCTGGCGAGCCCGTGCGACAACG
GACGCTGCATCAACACGCACGGCGGCTTCGAGTGCGAGTGCGAGCTGGGCTACGTGCTGG
ACGCCACCGCGCAGCGTTGTCTGGACAACCGGCGCGGCTCGTGCTGGCGCCGCGTGGTGG
ACGGACAGTGCGAGGCCGCCGCGCCAGAGCTACTCCTGCGCCAGGAGTGCTGCTGCAGCG
TGGGGCTGGCCTGGGGCTCGCCCTGTGCGCCGTGCGATCCCGACCACTGCCCCTGCCCCA
AGGGATTCGCCAAGCTGGACGGCGCCACGTGCCGCGACGTGGACGAGTGCGCGCTGAGTG
CGGAGCTGTGCGCGGGCGGCACGTGCGTCAACACGGACGGCTCCTACCGCTGCGACTGCC
CGCCCGGACTCACGCTGGACTCCACCGGTAACCGCTGCGTGGACCGGCGGCGCGAGTCCT
GCTACACGGAGATGACGGGCGGGCGCTGCTCGGGCCCTCTACCCACCGACGTGCTGCGGG
CCGTGTGCTGCTGTTCAGCCCTGGGCAAGGCCTGGGGGAACCAGCGCTGCGAGCCCTGCC
CTAAGAAAGGAACGGATGCCTATCAAAACCTGTGCATAGCAGTGGGCACTCTGCTACCGC
CGAACCAGTGGGACAGACCGATCGACGGCAACATGACCGACATCTGGTCACAGGTCGGAG
GAGACGAGAACGGGGACGGGTATGGGAAACAGTGGGGTGAGAATGGTAGCGACGGAGGTT
GGGATACCTGGGGGAACGGAACCGTTGGAGGAAACGGACCGGGACTGATCCCCGGACAGA
TGGAAGTTAACGAGTGTGCAGCTTTCCCTGGACTCTGCGGCCATGGACGCTGTAGAAACC
TGCTTGGCGGGTTCACTTGTGATTGTTTCCCTGGATACGAAAAGGATTCAAAGAACCACA
CGTGCGTGGACGTGAACGAGTGTGAGATCGTGGACGGCGTGTGTGGTGACGGCGACTGTC
ACAACACTGAAGGCAGCTTCACCTGCCACTGCCGTCCTGGGTACAAGGCGGACGACTTCT
CCAAGATATGTGTCGACATAGACGAGTGCGCGGACAACGACGCGTTGTGTCGCGGCGGCC
GCTGCGTCAACACGGCGGGCTCGTTCCGCTGCGAGTGCGGCCACGGCATGGAGCTGGCGC
CCGACAGACTCTCCTGCAAGGACATCGACGAGTGCTCCATCACCTCAGGTATCTGCAGCA
ACGGCGCGTGCGAGAACCAGATGGGCACGTACCAGTGCGTGTGCGACGAGGGCTACGCGC
AGTCCACCGTGAAGTCGCACTGCGACGACATCGACGAGTGCGCCGAGGACGCCGCGCGCT
GCCAGCACTCCTGCGTCAACACGCCCGGCTCCTACCACTGCACCTGCCGCGAGGGCTGGC
ACCTGCGCGCGGACGGGCGCTCGTGCCGCGACATCGACGAGTGCGCGG
(2028 bp)

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