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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13819_c0_seq2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		bmp-2_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.53 TPM:6.56
ORF EntryO_BomoSK16181_complete:A_BomoSK_comp13819_c0_seq2
Sequence
(Nucleotide)
AAAAATACTAACTCTATGTTCGATTCACAGTTCTCCGTATCGATATTGAGTAGGTATCGC
AGTATTGATTATTCTGTCAGTACTAGTATCGAACTAAAAGTAGGTATCGAGTATTCACTT
GTATCGGGATATATCCCTATTTCCGGTAGCCATCTTACTTTAATTGCGTCGGGTGACTTG
AGACTAGTGCGCTCGTTTTTTTTTAAATATTAACGTAACATTTAATAGACATAATTTCTT
GGAAGTGATATAAATCAGTGATCATGGTGCCGCAAACGAAGGTGTTCGTCGGCAGCCTGC
CGCAGGGCTCCAAACCGGAGGACCTAAGAAAGCTGTTTGAGCGTTTCGGCGTCGTCACAG
AGTGTGATATAATGAACCGGTGCGGGTTCGTGCATATGCAGACAGAGGAACAAGCGGCAG
CGGCGATTCGCGCGCTTCATAACTCTACATTTAACGGCGGCGTTATATCCGTGGAGCGCG
GTCGCATCAAAGAACGCGGGCAGCGTGGGGGCGGTCGCGGTGGACGAGGTTCCATGCGCG
GTGGCATGGAGCGTCGCGGAGGCGGCCCCGTGCGACACGCGCCCCCGCCTCGGGACGCAC
CATACATGAGGGACCGGCCAGGTCCGGTGCGCGGCTACGAACGCGGTCCGCCGGCGGCGC
CCTATGACGAGCGCTATGCGTACGGCGAGGACCGGCGTGGGTTCGCGCTGATGGATCGCG
GCCCTAGGGACGCTTATGCACCGCCGGCGCCTGCTTACCCTGACGAACGCTACCAGAATC
ACATCTCAGTGGTGGAGGGTACGCGACGTTACGATGAGCCTCCCTATGACGACCGCCACT
ACGACGAGCGCGCACAGTATGAACGCCCGAGACCTGCTCACCACATACCTAACGGGGACA
TGTACAGCCGAAGATCACCTGCCCCCATGTATTCCGGGCGTGGAGGTCCAGCTCCAGTGG
CCGGAGGTTACGAGAGAGATCACTATGTACCACAATACATGCAACCTCCATTGGGACGCG
GGGGCGGAGCGCCACGGGGCCGCGACATGTCCGGGGGCGTCGGCCCGCGCCGGTACTAGC
CGCCACTGACCACGAACTTCAGGACCACACGTCTATAGTCTATAAGTTAATTAGAATTAT
GTCAATCGTTTTTTAATTAAATAAATGAGAACAATCAAGACGAATCGCCTTCATTTTGTA
ACAAACCTTATGTTTTTGACGTAAGACGCAGATTAGGTTAAATCAATTATATGATGTTGA
CGTTCTTCCCTAGAAAAAATGTAAAAATATACTTGTTTCAAAATGTAATTGTCTATCTGT
GGAATTAAAATCGTTAATGAATCGAAAGTTTTCACTTATATATACACATCCCCGACAATA
ATCTGCATGTTTTGTTAGTTGCCCCGTTCAGCTTCCTCTTCGTTGCTTTACAACGGGTGT
TTTTTAAGCCCGATAGAACTTGAGAGACTATATATTAATCTGAAAGTATGTAGAGAATTG
TTTTATTAATGCAAACGATACCGTGGCGTTAAATTTGAATATGATTTCGGGCCATACGCC
ACCGGCTATTCTTGACGATGCGTATCTATTTAGACGTCCAATTGCGATTCACTATTTCCA
ACACTGCCGACCGGTCGTCCCATATAACATTAGCAATTTAGCGTCCAAGCCGTTAAGGAT
AAAATACTGACTTGAAATATAACCTAACCCCACAAGATAAGCAGTTGATTCAAATTGCAC
GACCTCGGAAGATCATAACGAGCTTATCCATAAATTTATTATTACGTGTCTGCGTAAAGC
TTTCTTGTTTAAACAATCACAAGTCCGCATCAATGTCGTTCTAATAAAACAAACCCAGTG
ACGCGAAATCTGGCCTAGTTGTTGAGAAAGAAGGACTAACGCACTATGTTATCCGCTCCT
AATTGATATTTCTGGGCCTAACGAGAGTCTTCGCTCTCTTGTGGATTGGGCGAGCTCTTA
AGCCCAAAATTGACTCGAGTTTTTGGATATAATAAAAACGGGTCAGTTTCAAATTTTTCT
AAAAATCGTTTCGCTCTGGTTTTCGTACCAGCCTGGGGATATTTACGCTTAGAAAGACAG
ATTGCGTAAAATTTACCACATACTAGTCTGAGAACGATTATGATACATTTTGTTCATCGT
TTACGCCTTTGTTTATGTATTATCTTAATTACGTACATTACTTTTGCGGTTTATTTAAAT
TATTGCATCATTATAAAGCGGTGTTGTTGTAATCTATGTACAGCTCAAGGTATTGCTTGC
TCGGTAAATGGACGGATTACATGCGCCTTTTAAAATTACCAATCGTCAAGTAGCGCGAAT
AAACGTCTGATTTTCAATTCAATTTAGATTATATAGAGTAGCATCGCTCAAACGTCAGCA
TATTCAGCATGGTTTGTCGGAGTATGTCGATAGTGACCGGTCTCTCTGAGGACAGTTATG
ACACGTTTTACGGTTGACGCATTTAAGTTCTATCTCAGCAAAAAAAACACCCATTGCTTG
GTTGTGGTAATATTACATTAAACTGATTACAGTGACTATTCGTATAGTTATATAAGGGAT
GCGTTCAAATAATAATTTTCACATATAAAATAAACTAATTTTAAATTCTATCTTTCGATA
TTAAAACGACTACCCACAAGATCGCTTCAAATATTTCTATAAGCCGTTTGGTATAAATAT
ATTACAAGGGCATACGTTGATTACCTACCGACTTTAGAACAGAGGACGCATCCCAGATTT
CTGCTTATGAAACAGATTACAGAGCACACGATCATTTAGAACGATACGTTTACGAGATTT
GGAAGGTGTGATACGGAAGTTACTATGGAATTAGAGCCTTTATCGCAATGAAACAACACA
ATACACGACAAATATTCACATTAACATTCTCGTCAAGGATATTGCAAAGCGGCCGTTAAT
AAATCGGTTTAAATACAGTTTTAGTTCGTGAAAAATCAAAGGACGTTAGCGGAATCGAAT
ACTATAGTAATTTACGGATAATTTTGGGTCTTGGGCGATATACAGTGACACGTCCGGTCC
TTTGGAGTGTCAGCGTGGAAGTCTTATTGTTTACCCCAGTGTCTAATCCTCGTTGGGATA
TGAGGACACCAATTGTCATATATATTGTTACAAAACAGACCCGTTGCTTATGACGTTATC
CACGCATGGAACATATCGATAGAAATGACGGTACGGCATTACGCGTTGATGTCTGAACTC
ATAAACAATTCAACGTAAAAACTGGCGATTTATACAAAAAAAAAAACGGGCACGCTAAAC
CGCATAGTTTCTATAAGCGTTTTGTGTTGTAACGATAAAGGCTCGTGGTGCGTGTTCTGC
GATCGTTTCGGAATGCTCTGTAATCTAATTTGACTAACGGCGTTGAGCGTCGCCTGTGCG
TCCCAGAGTCCTTTCAGATAGTTAGTGGCGGATCAACGTTCGGGCGGCGATGCGTACTCG
ATGCTAACAGAAGCCTTACGCACTAAATAGGCGGCGACAGACGAAGACACAGGAAAACGT
ATACACAAATTGTAAGTACGGCCATCGAGCAACGTAAAGTGTGCGCTCAAATAAAACGGT
GATCGAATACGCAGCTGTACAGTCACGTCGAAAACGTTACGTCTTTTACATTCTGACTAT
CAAAAGAAGTTGTACATTACGAATCGTAACGGCAATAGTTTTCAATTTTTGACGTGACAA
CGTCTTAT
(3728 bp)

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