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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13819_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		bmp-2_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.84 TPM:0.85
ORF EntryO_BomoSK16179_complete:A_BomoSK_comp13819_c0_seq1
Sequence
(Nucleotide)
AAAAATACTAACTCTATGTTCGATTCACAGTTCTCCGTATCGATATTGAGTAGGTATCGC
AGTATTGATTATTCTGTCAGTACTAGTATCGAACTAAAAGTAGGTATCGAGTATTCACTT
GTATCGGGATATATCCCTATTTCCGGTAGCCATCTTACTTTAATTGCGTCGGGTGACTTG
AGACTAGTGCGCTCGTTTTTTTTTAAATATTAACGTAACATTTAATAGACATAATTTCTT
GGAAGTGATATAAATCAGTGATCATGGTGCCGCAAACGAAGGTGTTCGTCGGCAGCCTGC
CGCAGGGCTCCAAACCGGAGGACCTAAGAAAGCTGTTTGAGCGTTTCGGCGTCGTCACAG
AGTGTGATATAATGAACCGGTGCGGGTTCGTGCATATGCAGACAGAGGAACAAGCGGCAG
CGGCGATTCGCGCGCTTCATAACTCTACATTTAACGGCGGCGTTATATCCGTGGAGCGCG
GTCGCATCAAAGAACGCGGGCAGCGTGGGGGCGGTCGCGGTGGACGAGGTTCCATGCGCG
GTGGCATGGAGCGTCGCGGAGGCGGCCCCGTGCGACACGCGCCCCCGCCTCGGGACGCAC
CATACATGAGGGACCGGCCAGGTCCGGTGCGCGGCTACGAACGCGGTCCGCCGGCGGCGC
CCTATGACGAGCGCTATGCGTACGGCGAGGACCGGCGTGGGTTCGCGCTGATGGATCGCG
GCCCTAGGGACGCTTATGCACCGCCGGCGCCTGCTTACCCTGACGAACGCTACCAGAATC
ACATCTCAGTGGTGGAGGGTACGCGACGTTACGATGAGCCTCCCTATGACGACCGCCACT
ACGACGAGCGCGCACAGTATGAACGCCCGAGACCTGCTCACCACATACCTAACGGGGACA
TGTACAGCCGAAGATCACCTGCCCCCATGTATTCCGGGCGTGGAGGTCCAGCTCCAGTGG
CCGGAGGTTACGAGAGAGATCACTATGTACCACAATACATGCAACCTCCATTGGGACGGA
TCTGGTGAACAATATATAACTAAAAGAAACTGATGAAAAAGACCTTTTGACGATACTACT
AGAAAACAACTACTAACTGCAAGAAAAATATAACGAAGGGATATATAATAAATCGGAATT
AATCGATGTGTGTTTACCTTAAAAGAAAGTTTAGTACACTGCTTAATTTCTAAATAAAAT
GGTCATTTTTTTTAATATTGTACGGAACCGTTGGACGCCTCTCTGAGTATAGTGGAAATA
ATGTGTTAGACATGTCGATATAACTGATGCGTGCGTCGATGAAGCGATGAGCGACAAGGG
AGGGCGCTGGTCCACTATAAGCCGAGCGGGTGTCGGTTGTGTCGGGGCTGATGGCTCACG
GTGTGTGTTGTGTGTAGCGGGGGCGGAGCGCCACGGGGCCGCGACATGTCCGGGGGCGTC
GGCCCGCGCCGGTACTAGCCGCCACTGACCACGAACTTCAGGACCACACGTCTATAGTCT
ATAAGTTAATTAGAATTATGTCAATCGTTTTTTAATTAAATAAATGAGAACAATCAAGAC
GAATCGCCTTCATTTTGTAACAAACCTTATGTTTTTGACGTAAGACGCAGATTAGGTTAA
ATCAATTATATGATGTTGACGTTCTTCCCTAGAAAAAATGTAAAAATATACTTGTTTCAA
AATGTAATTGTCTATCTGTGGAATTAAAATCGTTAATGAATCGAAAGTTTTCACTTATAT
ATACACATCCCCGACAATAATCTGCATGTTTTGTTAGTTGCCCCGTTCAGCTTCCTCTTC
GTTGCTTTACAACGGGTGTTTTTTAAGCCCGATAGAACTTGAGAGACTATATATTAATCT
GAAAGTATGTAGAGAATTGTTTTATTAATGCAAACGATACCGTGGCGTTAAATTTGAATA
TGATTTCGGGCCATACGCCACCGGCTATTCTTGACGATGCGTATCTATTTAGACGTCCAA
TTGCGATTCACTATTTCCAACACTGCCGACCGGTCGTCCCATATAACATTAGCAATTTAG
CGTCCAAGCCGTTAAGGATAAAATACTGACTTGAAATATAACCTAACCCCACAAGATAAG
CAGTTGATTCAAATTGCACGACCTCGGAAGATCATAACGAGCTTATCCATAAATTTATTA
TTACGTGTCTGCGTAAAGCTTTCTTGTTTAAACAATCACAAGTCCGCATCAATGTCGTTC
TAATAAAACAAACCCAGTGACGCGAAATCTGGCCTAGTTGTTGAGAAAGAAGGACTAACG
CACTATGTTATCCGCTCCTAATTGATATTTCTGGGCCTAACGAGAGTCTTCGCTCTCTTG
TGGATTGGGCGAGCTCTTAAGCCCAAAATTGACTCGAGTTTTTGGATATAATAAAAACGG
GTCAGTTTCAAATTTTTCTAAAAATCGTTTCGCTCTGGTTTTCGTACCAGCCTGGGGATA
TTTACGCTTAGAAAGACAGATTGCGTAAAATTTACCACATACTAGTCTGAGAACGATTAT
GATACATTTTGTTCATCGTTTACGCCTTTGTTTATGTATTATCTTAATTACGTACATTAC
TTTTGCGGTTTATTTAAATTATTGCATCATTATAAAGCGGTGTTGTTGTAATCTATGTAC
AGCTCAAGGTATTGCTTGCTCGGTAAATGGACGGATTACATGCGCCTTTTAAAATTACCA
ATCGTCAAGTAGCGCGAATAAACGTCTGATTTTCAATTCAATTTAGATTATATAGAGTAG
CATCGCTCAAACGTCAGCATATTCAGCATGGTTTGTCGGAGTATGTCGATAGTGACCGGT
CTCTCTGAGGACAGTTATGACACGTTTTACGGTTGACGCATTTAAGTTCTATCTCAGCAA
AAAAAACACCCATTGCTTGGTTGTGGTAATATTACATTAAACTGATTACAGTGACTATTC
GTATAGTTATATAAGGGATGCGTTCAAATAATAATTTTCACATATAAAATAAACTAATTT
TAAATTCTATCTTTCGATATTAAAACGACTACCCACAAGATCGCTTCAAATATTTCTATA
AGCCGTTTGGTATAAATATATTACAAGGGCATACGTTGATTACCTACCGACTTTAGAACA
GAGGACGCATCCCAGATTTCTGCTTATGAAACAGATTACAGAGCACACGATCATTTAGAA
CGATACGTTTACGAGATTTGGAAGGTGTGATACGGAAGTTACTATGGAATTAGAGCCTTT
ATCGCAATGAAACAACACAATACACGACAAATATTCACATTAACATTCTCGTCAAGGATA
TTGCAAAGCGGCCGTTAATAAATCGGTTTAAATACAGTTTTAGTTCGTGAAAAATCAAAG
GACGTTAGCGGAATCGAATACTATAGTAATTTACGGATAATTTTGGGTCTTGGGCGATAT
ACAGTGACACGTCCGGTCCTTTGGAGTGTCAGCGTGGAAGTCTTATTGTTTACCCCAGTG
TCTAATCCTCGTTGGGATATGAGGACACCAATTGTCATATATATTGTTACAAAACAGACC
CGTTGCTTATGACGTTATCCACGCATGGAACATATCGATAGAAATGACGGTACGGCATTA
CGCGTTGATGTCTGAACTCATAAACAATTCAACGTAAAAACTGGCGATTTATACAAAAAA
AAAAACGGGCACGCTAAACCGCATAGTTTCTATAAGCGTTTTGTGTTGTAACGATAAAGG
CTCGTGGTGCGTGTTCTGCGATCGTTTCGGAATGCTCTGTAATCTAATTTGACTAACGGC
GTTGAGCGTCGCCTGTGCGTCCCAGAGTCCTTTCAGATAGTTAGTGGCGGATCAACGTTC
GGGCGGCGATGCGTACTCGATGCTAACAGAAGCCTTACGCACTAAATAGGCGGCGACAGA
CGAAGACACAGGAAAACGTATACACAAATTGTAAGTACGGCCATCGAGCAACGTAAAGTG
TGCGCTCAAATAAAACGGTGATCGAATACGCAGCTGTACAGTCACGTCGAAAACGTTACG
TCTTTTACATTCTGACTATCAAAAGAAGTTGTACATTACGAATCGTAACGGCAATAGTTT
TCAATTTTTGACGTGACAACGTCTTAT
(4107 bp)

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