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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13817_c0_seq3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:10.08 TPM:10.13
ORF EntryO_BomoSK16167_complete:A_BomoSK_comp13817_c0_seq3
Sequence
(Nucleotide)
TTACTAACAATATGAAATATATGTTAATTAAAATCGTTTCAGCAAATTCATTAAAATATT
TTAATAACATGCTGTACGTTCAATGAAATTTTTCTTAGAAGTCAAATAGAAAAAAAACCG
AACACTAATCGGATCCAGAAACACTAGTTTGTTTCTTCATCGACTTCAATGCTCTCTCTC
TCAGTTTCTTTTCCAAATCTTCGTTATTAACTTTTCCTTCTTCCTCTTCTTCCTCGGCTT
CATCGCTATCAGAAGAATCCTCTTTTTTCTTTGATGATTTCTTATGCTTCTTGTGTTTCT
TATGCTTTTTAGAATGCTTCTTATGTTTCTTATTTTTCTTGGATTTCTTAGGTTCATCAC
TGTCTGAATCTGACTCTGAGTCTGTTACCTTCTTCCTTGCTTTCTTCTTTGACACCTGGT
CACTTTCAGAAGAGGACTCTTCCTTTTCCCTCTTTTTAGGTTTTTTCTCGTTTTCGTCAC
GAGATTTAGGTTTAGCATCGTCTACTTTCACTTTTGCTGGTTTATCCTCTACTTTCTTTA
ATTTAGCAACTTCTGGTGATAAGGCTTTTTCCTTAATAGAGTCAGTTTTTTTACCGCGTT
TTGGGTCTTTTTCTGAACTAGAAGTATCACGTTTAGGGTTTTTCTTCTTAGATTTTGCAT
CAGTATCCGAACTATCATCTTGGGAATCCTCAGAATCGACTTTTTTGGACTTGAGCTTGT
TTTCAACTTTCTCAGACCTTGACCTTTCGCTACTCGCATCCTTGGCGCGTTTTTTAGACT
TCTTATCAACATCAGATTCGTCGACGACATTTTTTTGTTTTGTCTTTGAAGCCTTGTGTT
TAACTTCTTCTTCCGAACTGGAGTCGGAGCTCGACGAGCGAGCTCTTTTCTTTCTTGATT
TCTTGGCCAACTTCTTTTTAGCATTCTTTTTGCTTTTCTTCTTCCTATCTTCTTCAGATT
CACTAGAAGAAGATTCCTCAGAATCGCTATCGCTAGAAGAGCTCTCTTTTTTGAGTTTCT
TATTTCTCTTAGATGTACCCTTCTCCTTACGCTTGATTTTGGACTTACTTTTGGATTTCG
ATAGCTCCTCGCTACTCGCACTTTCAGAATCTGATTGATGGGCTTTACGTTTAGCTCTTT
TGGATTCCTTGGTTTTTATTTCGTCCTCATTCTGCTCTTTTCCCGAAACTTCATCAGATT
TCTTATTTTTGTCAATTTCATGTCTTCGCAAGAACGGTGATGGAGTGCGTGAAAGACTTT
TTGAGTATTCACGCAGGTTTGGAATATTTACAATATCTTCTTTCTCTTCGTCGTCAGTGT
GGTCTGACTGGGTTTTTCCGTCATTAAAAGGTTCTGGTGGGGGTTTTTCAACAGCTACTG
ATGATTCTCGGCTTGTGCTAGATATAATGCGCTCTTTAGATTGCTCACGCGGAATAGGCA
GGTGCTCAGGCTTTTTGGGTAATTTGTCATTATTTTCTTTTCTCGGAATCGAGACAGATT
TCTCTAAACGCTCCTTGATAATATCGCTAGACCTTCTATCGCGAGATTTCCTGTCCCTGG
ATCTCCTGGAGCGATCGCGCGATTTCCGCTCTCTGGACTTATCTCGTGAGCGGCGGTCTT
TGGAGCGGCGATCACGTGAGCGTCGGTCGCGTGACCTGCGTCCTGAGCGACGCCTCGACC
GCGACCTGCGACGTGAACGGGAGCGGCGACGGTCTCGAGACCTGTCTCTTGAACGTCGTC
GAGAGCGTGAACGCGACCGTCTGCGTCTTTCAAGCGATCGTCGACGTTCTCTCGACCTCT
CACGCCGTTCTCGTTCACGGCGTCGTCGCTCTCTTTCACGTTCGCGTTCTCTTTCTCTCT
CCCGTTCTCTTTCCCTCTCACGACGATCTAACGACCTACGTCGGCTGCTCCTACGGCGAG
ATTTACTCCTTTCTCTTCGGGAGCTGCGCCTAGGGCTAACACTTGTAGAAGAATCACGAT
TCGAACGGTATTGTCGTTTTTTATGTGACGATCTCTTCTTCACACTGCCACGGGATGAAG
CTGAAGACGAGCGTCTTTCGCTAGATGATCGGCGCGACTTATCAGCAGGTTTCTCATCAT
TGGTTTTCTCTTTCTCGTCCGTTGACTTAGCAGGTGACACAGATCTAGATTTCTGACCTT
CAACTTCAGATTTCTCTTCAACGTTCTGTGTTATGGTTGGTTCCTTGTTTTCATCATTGA
CAGGTTCATTGACAGTTGGAGAATTATTCTGAACTGGTTCTTCTTTAACCTCTTCTTCAT
TCTTTTCTGGTGACTTACCGTTCTCTGCTACACTTGGAGCTTTGGTTTCCGGTTCAGTTT
TCGCAGGGCTGACCTTGTCTCTGATCGGGCTGCTGCGCCGTCTCGATCGACGCGGACTTC
CGCCGTTACGATGCTTTCTGTCACTGGAACGATCACGAGAACGAGTTCGCGAGCGCCGTC
GGTCGCGAGAGCGGCGCCGGGAACGCGACCGGGACCTCGATCTCCGTCGCTCCTTGTCTT
TGTCCTTGTTCTGCTGCTCCTCCATTCTCTTCTTTATTTCTTCTTTCTTCTGCTGAGTAA
ATGATTCGGGTATACCGTTTTCACTGGCCTGCGCGCTCAGCAACAGCTCCCATAACTCTC
CCATGAAAAGGCGTGCGTTCTTTCCATTTAGGAATCCAGTCAAGTTGATCTGCATTTTCT
TTGGGCATGGGAACTAGGATCCGACATAGATGGGATCAGGAAAAGAAAAAAATCGTATTA
AAATCGCAAACACCTAAACCCCGATGTACATAACGACGACGTCGATTACTGGGCAGGATT
TGTACCATGTTGTACTCAGTATAATTCATCATCATTTTAATGTTCAAGATTCTTTCACTT
CATGATGTGTTTAAAACGATTTTTTTTAATGGGTATATCTGGAATAAGATACTAAAGCCA
TTAAGAGTTTAAACTTATAAATATGCAAATAAGTGTAACAGATATGACTCAGGTAAGGAA
GCAACATGAATATACATAATATGAAATGTTTCATGTTTTTTAGAAGTCTTCATAGCGTGT
CGAGTGGCGACGATGCAGAGATGATGAGGGCGCAGCGAAGTTGTAGACCGATGTGATGCT
CTGCATATGACGCCCCGCGCCAACACTCACCGCACACTCGCCCTCTTCAAAACTTGCATC
TGTAAGGGTGTTGCGATAACAACCACATTATGCTGAACGCAAAGCCTAACGACAAAACTT
CCTTGCACTGAGTCAAATCACCTCTTAATGGCTTTGGGGAACTAATACTCTAATTATGTA
TTTTAGTTATTTTCCTTTTCTGAAAACTCTTCTTCATTTAATTATGAGTTATCTTGTAAT
TATTTAATTTTCCCCGTAAATACCGCAGATATGCTAAGGGCCTCCGAAAGAGCGTAGCTA
GCAGGCAGCGTCGGGGAGCTGGCAGCACCTTGCGGGGATGACTTCGACGGCGCG
(3474 bp)

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