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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13808_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		geranylgeranyl_diphosphate_synthase_[Choristoneura_fumiferana]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.81 TPM:5.85
ORF EntryO_BomoSK16139_5prime_partial:A_BomoSK_comp13808_c0_seq1
Sequence
(Nucleotide)
AGAGGTCCTACCACCAGTAATTTTTCAAAGATGTCCCTTATACCAAATAACCCTTCACTT
CTCGATATATATTTCTGTTTTATAACACTAGCAAAAGTTTCGCTAAAATTTAAGGAACAA
ATTCAACTACCCTCACTATTTGTATTTGGAATAATTTATATTTATAATAAATTAAGCTCA
TCTTTAGTTGTGCTCAAACGTAGTTCATTTGATCGTTAGCGTCGTCGCCTTCCTGTCTCC
AGGTGAGCAGGTCGTCCAGCAGCGCCTCCAGCTGTGGGTTGCCGCCTAGACGGGACACCT
CCTCCCTGGCGCGCGCGTCCAGATCGTTCAGGATCCCCCTCGTGTACCGGAAGCTGCCCA
ACTTCTCCAACAACGTGATGCAGTAACGTTTCACTTCAACGTCCCGTGTCCTTTGGCGGA
GGATATGAAGGACTTGTTTGTCGTCCTCCTGACTCCTGATGGCGTGTATGATGGGGAAGC
TGAACTTCCCCTCCGTGAGGTCCTCGCAGTAACTCTTGTTCTCTGTGTACTCCCTCATCG
ACAGGTTGCAGTAATCGTCGCGGATCTGGAAATACAGCCCCAACACGGCGGACAGATTGG
TGAAGTCCGATTTGTTCTCGCTAAACAACTGCATCAGTCGTATCGCTAGCATGAACAGTC
CACCGGTTTTTTTGATGGTCATCTGTTTGTATTCGTCTTCAGAGGGACACTGGAAGTTGT
CCCGCCAGTAAATCTCCATGCCCTGACCTCGATGCAATTCCAACAGCTGTTCGGTGTATA
CAGTCGTTGCCAATGGATGGCCAAGCTCCAAAGTCTTCTCGAGGGCTATGATCATAGCAT
AGTTCGCAGCGTTGATGGTGCTCGCGACACCATAGATGGAGTGGGCTACCGGTATTCCGC
GCCGTAAGATGCTGTTGTCTTGAATGTCGTCGATCAATAAACTGGCATTGTGTAGCATTT
GTACAATATCACCGACTAGTCTCAGTTTCTCTTCAGATATCTTGAGCCAGTAGTTGAATG
CGGAAGCTAGCTTCGTTCTTATCTGTTTCCCTGGTACTTGCTGAATGTATGTGTAAGGCA
TGAGAATTTTCTCATCTTGATTTTTATCACCACTTCTTGTGATAGCTTGCGACATTGTTG
TAGATCTATTGATGAAAATATATAACACTAAAAAATGATATTCAGTGTATTGATTTTCCG
CTTCAAGATATTTACCTCGCCG
(1222 bp)

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