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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13743_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_trafficking_protein_particle_complex_subunit_4_[Plutella_xylostella]
Ontology
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016358 P dendrite development
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045212 P obsolete neurotransmitter receptor biosynthetic process
Transcript
Level		FPKM:18.62 TPM:18.73
ORF EntryO_BomoSK15779_5prime_partial:A_BomoSK_comp13743_c0_seq2
Sequence
(Nucleotide)
CAACGCGCTGTGCTGCCGCGAGGACGCGCGCTCCGTGCTGGCCGCCGACACGCACCACCG
CGTGCGCCTCTACGACTTCACCGACCTCACCGACCGCAACCTAATACAAGAGGAGCACGC
TGTGATGGCGATGACTGTGAACGCAGCGGACAGCCTGCTGCTGCTGAACGTGGCCAACCA
GGGCGTGCACCTCTGGGACATACGAGCCCGAGCTCTGGTCCGACGTTTCCGTGGGTTGAG
TCAGGGCCACTTCACCATCCACGCGTGCTTCGGCGGTGCTCATCAGGACTTCATTGCTTC
TGGCTCAGAAGATAACAAGGTTTACATCTGGCACATGAACGGCGAGGAGCCGGTGGCGGT
GGTGTCGGGGCACACGCGGTGCGTCAACGCGGTGTCGTGGAACCCGGTGCACCACGACGT
GCTGGTCTCCGTCTCCGACGACTACTCGCTGCGGCTCTGGGGCCCGCGCTCGCATCGCTG
CTAGTACCCTCCATGTCCCCGAGCGCCGCCCGCGACCGCCACGAAGCCGCGGACCATAGA
GTATCTTATTTAAGTCTCGACTAACTTAAATTAAGACTTCTAATATTACGGACAGAGTTT
AAAGATATTTTGTAAAGATGACCGCTTGTGTCTTATCTTATCGAGCGCTGAATCTCGGTG
AGTTGTTTGTACTTTCGAGTCGACCGAGGGTCCGGCCCGCGACCCCCGCCGCTCGTGGAA
CCTCATTGTAACTGTTCAGAACGACTGTTCAATATTTCATTAAATCGGAGCTAGTTTAGT
TTTATTAAAATATTGTTTGTTTGGCTCATGACAGTTGTTACTGTGAATGTCCTCATGTGC
TGTATCTTTCAAAAGCGCGGGAAGGGAAATAAAATTGCCTTTAATGACAGCGAATTGTGT
ATCTTCGTGTGTTTGAAAGTAACTATCGCGTTAAACATTCGGTGAAATAAAATGTAACGT
CAAAATTATAAATAGCGACTACGCGACGTGTACTCATCGCATTTTATGGAATGTATTTCA
CGTGTTTGTACACGTCCTACTAAACTTTTTGGACTCGAGATGAAAATAGTCTTATGTAAT
AAAATAGTTTCAATAAGTAAAAATTTTATAGGGAAGAGCATAAAACGGTCCCAGACTGTT
CTGGACTCGCCCCCCAGGGTCCGTCGTCTGCTGTTGTTCCGTCAGGGCGCGGACCAGAGT
GGTGACGTCAGTGCCAGCTTAACTGTGCACGTACTGAATATGTCGTCTACCCTCACACTC
ACTCGGGATGACCTCCCAGTGGATCCGGGGCCCCACTCCGACGGTCAGGAGAGGCAGGCC
CGTGGACGAGCACCCGGCATTAACGACCGGATATTTGTGCAATACTCTTCCCCGAGTCGT
CATCGGGCGAAGATCGATGCTCTGCATGAATATGTTGACCGTTTGTTCAGCACGCCGGAC
TGTGGAACCGCACCGGTGAATATGTCGACTATTGTCGGCACAGCCCATGCGTTCTGTGGG
GGACGGTACTAGTGCGAGACTGCAGGCCGTCCCCTCACCCACGTGATTCGCTCGGATGTC
GTGAGAATGTACGCGGACGCTGCAGTGCGACTGCTGGATGAGTCCGGCGCAGAGTATCAA
ACCGCATGTTGCTGCGGGCCACAGTGTGCCGCCCTGTCGACGGACTGACGTTTGCATTCA
ATTCTATTTTATAGACTCATTTTGATCTGTTTGAAATAGTATGATTGTAGGGATGAGCTA
ACTGCGGATTGTTGGTTCACCGAGGTCGTCGAAGTTAAATCACGTACGCAATTTTTTTCG
AAAACTACTAGAACTGCAATGAAATCTGCGCCGTTGACCGATGAAATTATGTTTTTAATT
TTTAGGCATTTTTGTATATTATTTTTAAATTTTTAGATTGTAATCTTAGTTTTTGTAAGT
CACGTCTGACGCGCATCTCTGGGGCACGATAAAGCTTCGTGTTAGCTGCAGTCCACGGGC
GCGACACAGAGGCTGCACACTACTCTGAGTGCGTCGAGGATCACGACTCTGGCTCGTCCC
GCCGATCGAGCAACACTTCATTGTTAAGAGGGAGGGATGTGCGTGAGTAGGGAGTACAAA
GGAGTTGTGTTTATTGTACGAATTAAATATAGATTAGAAGAACGGCAAGAACGAAGTCAA
CTTTGGCTAAGTTTGATTTGTTCTGAATTATAAATATTGATATCAATAAATTTTTTATTG
TAAACATTGTGCTGTCTTATTTACATTACACCTCTAAAAATAAATAATCATTTTGTTTAT
TTTCGATCAGAACATTTCCTAAATGATATCTAATTTTCCATTTATGTAGAGGAGTGCTTC
TGATTTTGCTACTGGATTACAAATTGCTATTTCAGATCAAACACTTAATCTTCCGTCTTT
ATTCACAAAATTAAGATAATGAAAAACTGATTCAAATTAAAACATGACTCATGATGACAT
TTACATAAAATTTATTTTTGGAATAAGTTGAGTATGTATATAGTTAAACATAATTTGACA
TTATACAGATTAATTAAATAAATTTACAATATTAAGCAGGTATTGACATTATACTTGTTT
TAAAATATTGCAAGCGGATAGATACCACAACGTAAACAGAGCCCGTCACGAGGCACTCCG
TTAATCTCAGGTATTGCACAAATTTTCTTTTTGTCTAACTGAAACTCATAGTGACTGGTA
GAAAATGGTTAATAATGGTACTAACCTGTGCAAATTTAAAAGTGCGACTTGCTACTTTAC
TGATATTATTGTATAATTATAAATTAGCAGTCCCAGACTTCTCAACTAGTTCCAGCAGTG
TGTGTAGAGATGTGTCGAACAGTTCACATCTTATTGGCATCTCGAGTGAGTAGAATGGAT
TCTTAAGTGCATAGTCTGAATATAACTCATAGATCCTCTTTAGGACCACATCAGTACCTT
GCATATTAGTGTCTGTTACTATTATAAATTTTACACCAGTGAGTGTTTGAAAACACGACA
ACTTGAATGTGTCAGCCGTTAAGGATTCTATTCCTGAGGATTTTGGTATGGGACTGAGCT
GACTAGCAAGGGCAAAAAGAGGATAGAACATGCTGGCCAGCACTATCTTCTCATTTGTTG
TTGCTCTCACTCTACCAAATTTTAGACTCAGAGGATAGTTTTCCTTAGCTTCTATAATAT
CAAAGACATCTCTATTGTCTTCCGTTGTTCTTCCTGTCACTGGAGATCCATTTACTGATA
GTAATACATGTCCAACATTTATTCCATCTCTTTGGCCAAATGCCACAACAACTTTTTTAT
TTTCATACTGCAATTTAATATCAAGGGGAAATCCAAACGTTTTCTCAGTCTCCACTCGAG
GAATATTGTGATCGTAGTTGTAGATGAGACCACCAGACTTGCTAACAATATAAATTCCGT
ATATAACCATTTTATTATCTTCTTTAATTGTAGTGTTTTCTACACATATGCATTAAATGT
TAAATGTAATTGTGAAATCTACGAAACTCGTTCACAAACTAATTTTAGTAATTTCACGTA
AACTTCTTGAAAATATCACTCGAAATATAAATAGTCGTACATATTTGAACTTTTTATCTT
ACATTTATAGTTTATTTCTTATCGATATGCGTAGCAAATATGAATATTATAGAAAGAGCT
ATTTTTTAATCGAAGTTCCACAAATAGTGAAAAAATGCAAAACAAAACATAAATGTAAG
(3719 bp)

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