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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13710_c1_seq6
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
Transcript
Level		FPKM:1.87 TPM:1.88
ORF EntryO_BomoSK15520_complete:A_BomoSK_comp13710_c1_seq6
Sequence
(Nucleotide)
TTGAAATTTCAGACAATTTATTCAAATTTATTATCCTCTGAAAATGCATTTATTTACAAT
CAACAACGGAAACAATACAAAAACATTTTCACTTATCATCGTATATATAGAATAGATCAT
TTTATAAAAATTACGAATACTTTTACTGATTGAATTTTCATTTTTATTTTATTTATAATT
ATTATAATAATAAAAAAGCGTGAAAAAAATACGTAAACGGCATAATACGGATGCCTTTTT
AAATCCACAAGGACACAAGTGCAAATTATCTAATAATAAACACTTTCAAAATACGAAAGT
GTATAAAATACTTAGGCAATAATGATAAAAATAAAACAACTAGCTTAAATTTTTCATATA
AAACTTACATTGACTAAGAGAAAGTTGTGATGATTATCAGAGATTTGAAGTCAAAGGAAG
GTCATTATTTTTAATACTGGACTGATGGCACAACTTCATAGAATGCACTTTCCTTTGACT
AATACTGGGCGAGAAACAGGAAAGAAGGACTCCACAACCCGATTTTAGCACCTTAATGGA
TTCTTATTTGGCAATATTGAACACAATTACATTCTAATATCGAAAAATACGACCACGGCT
ACAGGAAATTAGACTTTAATCCTTCTTCCCTAGAGCATACTTCGAATATACCCGAAAAAT
GATTGTTCGAAGATCACATGTTGTGACATGAACTCTGGCAACAACATCATCGATAACAAC
AAATGAATTTGGTAACGCTGACGAAATGTTTTTAAACTTATACAAAGCGTATCGCGGTTT
AAATAATGCCTCGCATCACAACATGTAAATACGTCTATAAAATATCTATATTAAATAAAA
AGAGAAAAAAAATATAAAAAAAAATCACAGTTTTCAAATTATGCAGTGTCACTCCAGATC
CGGTACGAAGCGTGAACGAACTTATTCTCATACTTATAAAAGAACGTAACTAATAAGTAC
ACAATATAATAAATACATAAAAAATAGTGACACAGAGAGACAATAAAGCAAAGACACCCA
CGCATACTGAGACGAATATGAATGCTTGTTAACAAAATGGCGGCGTGAGCGCGTAATGGC
GGATGTTTAAGGCGCCGGTAAGGCCGTGCGTTGGTAGGGGTGCTCCCTCATCGCGACTCG
CCCCGCCCTCCGCACCACACCGGCATGATCAGCAGCGGCGTACTCCGTGGCGAGCAGAGG
GTTCGCGGCCGCGGTGAGAGCTGCGTAGTTCGCGTAGTCGTAGGGCGACGCGTAGATCAG
CTGATGCGCGGGCTCGCCCGGAGACAGCAGGCCGGCCGCCGCTCCCGCCCCTGCCCCGTT
GAGAAGGCCGGGTTGAGCTGGCGCGGACATGCGAGGGGACAGGATGAGGGGCGCGCCGAG
GGGCGCGGGAGTGCGCAGGGCCACCCCGCCCACGCCCCCTGGTGCCAGCAAACGCTGAGT
CTCGGCTGCCGCCGCTGCAACGCGCCGCCATTCCTCGTCAGTTATTAGGCACTGACCGTT
CACAGGAACGGACACCTTCGAGCTGGAATCACGGTAAGTTCCATTTATGATCGCCAACTC
CATCAACTGGCGCTTCTTCAGTTCATCTTCACCGTCAGCTTGTGGCACAAGGAGACGCTT
CACTTCATCAACGGCCCTCGCTAGCTTTATCTTGGCTCTGTTTTCAGTATCTTCAACTGT
CAGCAGAACGTGGAGGTCATCTGCTAGGTGTTCCCAATTGGGTTTGCCCCTGTTTGCATC
TTCCTTTTTCTTGTCCCTCATCGACCCTTTTCCTCTGACCATAATTTTGCACCCTGTTTC
TTGTTCCAGCTGTTTTGCGGTCATACCTCTGGGTCCTAGAATCCTTCCCACGAAATTGAA
ATCGGGATGTTCTTTGACTGGCACATACACTTTTTCTGTGAGCGTAGTCACCATGCCTTC
TGGTTCTGGTAATATGAGTGGTTCCTTCTTCACTCCATTGATTTGAAATAGACTCGCTCG
GACCTTTGCTATTTCTTCATCCAGAAGTCGCTCCATGTGCATGAAAACATTCGGGAACGC
AGCCAGTTGCTTCCTGTCTTTGAGCAACTGAGCTAAGTAGTCCGCTATACTTTGCGTTGA
AGGATTGGTATTATCACACATTTTGAACCCTATGTAAAGAACTAGTGTCACGTAATATTT
CTATTCTAACACGATGAGATACAGTATATTGTACTTTAGTTACTAGTAAATGTTATTTTT
GTGAGAATGTGTTAGAAAAGTTAATATTCACTACCACACACAACGAAGTTTCGAACACCA
CTGAATGACGAAGTTGACCGAAGTGAAGTTGTGGGCGATAGCGGTGCGCTTGCGCTCTTG
ATTTTTCGTGCGCGTGCGACTACTGGCCACAG
(2372 bp)

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