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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13710_c1_seq3
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_protein_held_out_wings_isoform_X3_[Amyelois_transitella]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
Transcript
Level		FPKM:4.81 TPM:4.84
ORF EntryO_BomoSK15512_complete:A_BomoSK_comp13710_c1_seq3
Sequence
(Nucleotide)
TTGAAATTTCAGACAATTTATTCAAATTTATTATCCTCTGAAAATGCATTTATTTACAAT
CAACAACGGAAACAATACAAAAACATTTTCACTTATCATCGTATATATAGAATAGATCAT
TTTATAAAAATTACGAATACTTTTACTGATTGAATTTTCATTTTTATTTTATTTATAATT
ATTATAATAATAAAAAAGCGTGAAAAAAATACGTAAACGGCATAATACGGATGCCTTTTT
AAATCCACAAGGACACAAGTGCAAATTATCTAATAATAAACACTTTCAAAATACGAAAGT
GTATAAAATACTTAGGCAATAATGATAAAAATAAAACAACTAGCTTAAATTTTTCATATA
AAACTTACATTGACTAAGAGAAAGTTGTGATGATTATCAGAGATTTGAAGTCAAAGGAAG
GTCATTATTTTTAATACTGGACTGATGGCACAACTTCATAGAATGCACTTTCCTTTGACT
AATACTGGGCGAGAAACAGGAAAGAAGGACTCCACAACCCGATTTTAGCACCTTAATGGA
TTCTTATTTGGCAATATTGAACACAATTACATTCTAATATCGAAAAATACGACCACGGCT
ACAGGAAATTAGACTTTAATCCTTCTTCCCTAGAGCATACTTCGAATATACCCGAAAAAT
GATTGTTCGAAGATCACATGTTGTGACATGAACTCTGGCAACAACATCATCGATAACAAC
AAATGAATTTGGTAACGCTGACGAAATGTTTTTAAACTTATACAAAGCGTATCGCGGTTT
AAATAATGCCTCGCATCACAACATGTAAATACGTCTATAAAATATCTATATTAAATAAAA
AGAGAAAAAAAATATAAAAAAAAATCACAGTTTTCAAATTATGCAGTGTCACTCCAGATC
CGGTACGAAGCGTGAACGAACTTATTCTCATACTTATAAAAGAACGTAACTAATAAGTAC
ACAATATAATAAATACATAAAAAATAGTGACACAGAGAGACAATAAAGCAAAGACACCCA
CGCATACTGAGACGAATATGAATGCTGAAAAGAAAAAAAAAACACATGAAACTTGGAACG
CTACAAAAGAATCATCACTGAAAATCTTATATTTCCAAAACGTAAGTATTACGTCAACGT
TAATCTAAAAACTATTACATTCCAAGTTCCACAAATCGTTTCTCAATTTGCGAACTGGTC
AAGTCGATTTGAGATCCATAATTAAAATTTTCAAACTAGATATGCACACAAGGAATGTAT
TCTCATTCCACTTCTTTCTCCTTCCTATCTTCGGCAAGAGTTACGTCACCAAACGACTAA
TATTCAGACTGAATTATTCACTATCATCAAAAAAAAAGGACTGTCTGTTTGGGGAGTTAT
TATTTATTTTTTAATACTAAAAACCTTTAAAAGATGTTGTATTAGTGATTCAAGTGGACC
ATAGTTATCAATCGAAAAGGAACTTCCTCGCGCTTAAAACCATAATGACGAATTTTATAT
TCAAGTAATGATTAAAATAATGAAACATGATTAAAAAGACAATGAAATAATAAGACCAGT
TTATAAATCAAGAAATCGAAATGTGCGCCACAATTCTACGATGCAAGCAAACTTATTCCA
TCAGCATGCGTGCGCGCGCGCTTCTCACCTTGTTAACAAAATGGCGGCGTGAGCGCGTAA
TGGCGGATGTTTAAGGCGCCGGTAAGGCCGTGCGTTGGTAGGGGTGCTCCCTCATCGCGA
CTCGCCCCGCCCTCCGCACCACACCTAGCGGCACATTCACGTTTATACTGTGTCTCAATC
AGAACATAATACAACAACCTCCAAAACTCGTTCCAACCTAAAGGTAAACCTAAATTAATT
TATTTTTGTTCACAATTTTAGGCAATTCTGTGATACGAAAAATTGTATATCAATTTGAGA
ATATGAGGGTAGTGATGTTTAATAAGTCGAGGTGCCTATAAATAAATTGCTTTTAAAAAA
ATATCTAAACGAAACCGGCTTTAATCGTATAAATGCTGAAGTTTAAATATAATCTCATAT
AATATTTATGAAGAAATAGAAAAAGTTCACTTCCACTAACCTAAACGCAAGTCCAGTTAT
CACTGCCACAGATTCATCGATTTGTATAATATATTATTTTTATTATGGCAGTAACACTTA
ATCTCTGCTATTATGTCTAGGCCTATAAGATTACTATCTACCTATATTGCTTTGGAAAGA
ATAACAAAATAAAACATTTATAAAGTCCGACCGTATTAGGTCTATTTAAGGTACTGATAA
TGGCTGGCTATATTCTTTTGTTTTTAAATAAAATTGACTCGGCAGTACAAAAACTGCTGC
ATAATAAATCTAAATAATAAACTTCAATATACCGGCGTATATTTCACTCGTAAAGCTCAC
TCTTCGCTATCCTAACTAATAAATCTTTAAAAGATAATAATAATACTTATCCTATGGTAT
GTTTATAAATATATATTAAAAAAAATGGCTAATAAATTATTAAGTTTACGTAAAGATTTT
GTTTCGTAAAAGTAAAACTTTGTCCCGATATTGTTCAAAAACAAAACATTACTTTTACAA
CGCGTAATTTTTAACCACCTAGAATGTTCCAGAGTTTTCAGTAATAAATTGAAATTTATT
CTCGATTAATTTTGTCAGTTTTGTTAAAAAAAATATATGTAAGTAGTATAAAAGATGAGT
AACTAGTTTTTTTTTTTTTCGTTTGCAATTCAAATAATATTTGGTCCCTTTTGCTTGTAG
TCGACGTTTTATTATAAGTTACTAAAGATACTGTTAACACAAAACAAATTTATTCACTAT
TCATAAGTATTCTGGAAATTTTCAAAACCGACGAACGGTAAAACCGAATGCAAGGCACGG
AATTCCGTGTCAATATCATTCTTTCAAATCTACACATCAACTAAGAATTTTAAATGAATT
TTGGACAAATTAACGTATTGTTAATAATATTAGTTGTGTTACAAGCAAGGGTTATCACAA
TTACTTTAAATGGTTGAAACTATACAGTTCTTTATCTCCCATTTATTCGGAAAATGTCGT
GTTTGATAAAATATATAAATACGAACAAGGACTGTTATAGGACTTGTCTTCGTAAATGAA
ACATCGGTAACTTAAGATTCCATTGGCAGTTTAAATACGACAAACCGCCGTTAGAATTAA
CACGAAAATTAAGATTCGATAAACAAACAATAATTATATTACTACTACGAATAAATAAAA
TCTGAAATAAAATAAATAATCTTTGAACGAAAGAAAACAAAAACAAAATTTCTTCAGAAA
AAAAAAACGTACAACAAAAAAAAAGTTTGAAAACAACAATATTTCGAGACGCTATAATAC
GCTATGTCGTATCTTAATTAAAACGAATCTTACACTAAAGATTGATCATGGCTTTTATAT
ATGACTTTAAGAAACGTCCCGTGAATTTCGAAGGCTAATTTTAATACGTGAACGGAGTAT
GGTAATAATGTTGCGATGTGTGTAACGGCGTTTGGTGGACGCCGTATCTTATTGTCGGCT
GTGACTGTAGCGGCCAATGTCAAAAGCCAGCTAGCAGATACCTCGACGCGGCATGATCAG
CAGCGGCGTACTCCGTGGCGAGCAGAGGGTTCGCGGCCGCGGTGAGAGCTGCGTAGTTCG
CGTAGTCGTAGGGCGACGCGTAGATCAGCTGATGCGCGGGCTCGCCCGGAGACAGCAGGC
CGGCCGCCGCTCCCGCCCCTGCCCCGTTGAGAAGGCCGGGTTGAGCTGGCGCGGACATGC
GAGGGGACAGGATGAGGGGCGCGCCGAGGGGCGCGGGAGTGCGCAGGGCCACCCCGCCCA
CGCCCCCTGGTGCCAGCAAACGCTGAGTCTCGGCTGCCGCCGCTGCAACGCGCCGCCATT
CCTCGTCAGCGTTCACAGGAACGGACACCTTCGAGCTGGAATCACGGTAAGTTCCATTTA
TGATCGCCAACTCCATCAACTGGCGCTTCTTCAGTTCATCTTCACCGTCAGCTTGTGGCA
CAAGGAGACGCTTCACTTCATCAACGGCCCTCGCTAGCTTTATCTTGGCTCTGTTTTCAG
TATCTTCAACTGTCAGCAGAACGTGGAGGTCATCTGCTAGGTGTTCCCAATTGGGTTTGC
CCCTGTTTGCATCTTCCTTTTTCTTGTCCCTCATCGACCCTTTTCCTCTGACCATAATTT
TGCACCCTGTTTCTTGTTCCAGCTGTTTTGCGGTCATACCTCTGGGTCCTAGAATCCTTC
CCACGAAATTGAAATCGGGATGTTCTTTGACTGGCACATACACTTTTTCTGTGAGCGTAG
TCACCATGCCTTCTGGTTCTGGTAATATGAGTGGTTCCTTCTTCACTCCATTGATTTGAA
ATAGACTCGCTCGGACCTTTGCTATTTCTTCATCCAGAAGTCGCTCCATGTGCATGAAAA
CATTCGGGAACGCAGCCAGTTGCTTCCTGTCTTTGAGCAACTGAGCTAAGTAGTCCGCTA
TACTTTGCGTTGAAGGATTGGTATTATCACACATTTTGAACCCTATGTAAAGAACTAGTG
TCACGTAATATTTCTATTCTAACACGATGAGATACAGTATATTGTACTTTAGTTACTAGT
AAATGTTATTTTTGTGAGAATGTGTTAGAAAAGTTAATATTCACTACCACACACAACGAA
GTTTCGAACACCACTGAATGACGAAGTTGACCGAAGTGAAGTTGTGGGCGATAGCGGTGC
GCTTGCGCTCTTGATTTTTCGTGCGCGTGCGACTACTGGCCACAG
(4785 bp)

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