SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13710_c1_seq18
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
Transcript
Level		FPKM:5.63 TPM:5.67
ORF EntryO_BomoSK15555_complete:A_BomoSK_comp13710_c1_seq18
Sequence
(Nucleotide)
TTGAAATTTCAGACAATTTATTCAAATTTATTATCCTCTGAAAATGCATTTATTTACAAT
CAACAACGGAAACAATACAAAAACATTTTCACTTATCATCGTATATATAGAATAGATCAT
TTTATAAAAATTACGAATACTTTTACTGATTGAATTTTCATTTTTATTTTATTTATAATT
ATTATAATAATAAAAAAGCGTGAAAAAAATACGTAAACGGCATAATACGGATGCCTTTTT
AAATCCACAAGGACACAAGTGCAAATTATCTAATAATAAACACTTTCAAAATACGAAAGT
GTATAAAATACTTAGGCAATAATGATAAAAATAAAACAACTAGCTTAAATTTTTCATATA
AAACTTACATTGACTAAGAGAAAGTTGTGATGATTATCAGAGATTTGAAGTCAAAGGAAG
GTCATTATTTTTAATACTGGACTGATGGCACAACTTCATAGAATGCACTTTCCTTTGACT
AATACTGGGCGAGAAACAGGAAAGAAGGACTCCACAACCCGATTTTAGCACCTTAATGGA
TTCTTATTTGGCAATATTGAACACAATTACATTCTAATATCGAAAAATACGACCACGGCT
ACAGGAAATTAGACTTTAATCCTTCTTCCCTAGAGCATACTTCGAATATACCCGAAAAAT
GATTGTTCGAAGATCACATGTTGTGACATGAACTCTGGCAACAACATCATCGATAACAAC
AAATGAATTTGGTAACGCTGACGAAATGTTTTTAAACTTATACAAAGCGTATCGCGGTTT
AAATAATGCCTCGCATCACAACATGTAAATACGTCTATAAAATATCTATATTAAATAAAA
AGAGAAAAAAAATATAAAAAAAAATCACAGTTTTCAAATTATGCAGTGTCACTCCAGATC
CGGTACGAAGCGTGAACGAACTTATTCTCATACTTATAAAAGAACGTAACTAATAAGTAC
ACAATATAATAAATACATAAAAAATAGTGACACAGAGAGACAATAAAGCAAAGACACCCA
CGCATACTGAGACGAATATGAATGCTGAAAAGAAAAAAAAAACACATGAAACTTGGAACG
CTACAAAAGAATCATCACTGAAAATCTTATATTTCCAAAACGTAAGTATTACGTCAACGT
TAATCTAAAAACTATTACATTCCAAGTTCCACAAATCGTTTCTCAATTTGCGAACTGGTC
AAGTCGATTTGAGATCCATAATTAAAATTTTCAAACTAGATATGCACACAAGGAATGTAT
TCTCATTCCACTTCTTTCTCCTTCCTATCTTCGGCAAGAGTTACGTCACCAAACGACTAA
TATTCAGACTGAATTATTCACTATCATCAAAAAAAAAGGACTGTCTGTTTGGGGAGTTAT
TATTTATTTTTTAATACTAAAAACCTTTAAAAGATGTTGTATTAGTGATTCAAGTGGACC
ATAGTTATCAATCGAAAAGGAACTTCCTCGCGCTTAAAACCATAATGACGAATTTTATAT
TCAAGTAATGATTAAAATAATGAAACATGATTAAAAAGACAATGAAATAATAAGACCAGT
TTATAAATCAAGAAATCGAAATGTGCGCCACAATTCTACGATGCAAGCAAACTTATTCCA
TCAGCATGCGTGCGCGCGCGCTTCTCACCTTGTTAACAAAATGGCGGCGTGAGCGCGTAA
TGGCGGATGTTTAAGGCGCCGGTAAGGCCGTGCGTTGGTAGGGGTGCTCCCTCATCGCGA
CTCGCCCCGCCCTCCGCACCACACCGGCATGATCAGCAGCGGCGTACTCCGTGGCGAGCA
GAGGGTTCGCGGCCGCGGTGAGAGCTGCGTAGTTCGCGTAGTCGTAGGGCGACGCGTAGA
TCAGCTGATGCGCGGGCTCGCCCGGAGACAGCAGGCCGGCCGCCGCTCCCGCCCCTGCCC
CGTTGAGAAGGCCGGGTTGAGCTGGCGCGGACATGCGAGGGGACAGGATGAGGGGCGCGC
CGAGGGGCGCGGGAGTGCGCAGGGCCACCCCGCCCACGCCCCCTGGTGCCAGCAAACGCT
GAGTCTCGGCTGCCGCCGCTGCAACGCGCCGCCATTCCTCGTCAGTTATTAGGCACTGAC
CGTTCACAGGAACGGACACCTTCGAGCTGGAATCACGGTAAGTTCCATTTATGATCGCCA
ACTCCATCAACTGGCGCTTCTTCAGTTCATCTTCACCGTCAGCTTGTGGCACAAGGAGAC
GCTTCACTTCATCAACGGCCCTCGCTAGCTTTATCTTGGCTCTGTTTTCAGTATCTTCAA
CTGTCAGCAGAACGTGGAGGTCATCTGCTAGGTGTTCCCAATTGGGTTTGCCCCTGTTTG
CATCTTCCTTTTTCTTGTCCCTCATCGACCCTTTTCCTCTGACCATAATTTTGCACCCTG
TTTCTTGTTCCAGCTGTTTTGCGGTCATACCTCTGGGTCCTAGAATCCTTCCCACGAAAT
TGAAATCGGGATGTTCTTTGACTGGCACATACACTTTTTCTGTGAGCGTAGTCACCATGC
CTTCTGGTTCTGGTAATATGAGTGGTTCCTTCTTCACTCCATTGATTTGAAATAGACTCG
CTCGGACCTTTGCTATTTCTTCATCCAGAAGTCGCTCCATGTGCATGAAAACATTCGGGA
ACGCAGCCAGTTGCTTCCTGTCTTTGAGCAACTGAGCTAAGTAGTCCGCTATACTTTGCG
TTGAAGGATTGGTATTATCACACATTTTGAACCCTATGTAAAGAACTAGTGTCACGTAAT
ATTTCTATTCTAACACGATGAGATACAGTATATTGTACTTTAGTTACTAGTAAATGTTAT
TTTTGTGAGAATGTGTTAGAAAAGTTAATATTCACTACCACACACAACGAAGTTTCGAAC
ACCACTGAATGACGAAGTTGACCGAAGTGAAGTTGTGGGCGATAGCGGTGCGCTTGCGCT
CTTGATTTTTCGTGCGCGTGCGACTACTGGCCACAG
(2976 bp)

- SilkBase 1999-2023 -