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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13692_c0_seq4
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_M-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0044822 F RNA binding
Transcript
Level		FPKM:11.40 TPM:11.46
ORF EntryO_BomoSK15395_complete:A_BomoSK_comp13692_c0_seq4
Sequence
(Nucleotide)
AATATTGTAATTTATCTAAAATTTCAATAAATTTGTTTGCGATCGATTTGTGTATTTTTC
TTAAAACAACGTATTCAATTTTTCTTTCCATTAAAACCTCGTAAACAGCAAACAGTATAC
AATTGAGTAACTTTAAAAAAATACGATGAACCAACCTCATGTTTTCTGGAACTCTAATTA
GGCTCAAACTCTCTTCTCTCCTTCTCTTCTCACACTTCCAGAAAAGAAAAGCAATCGACT
AATTACAAAGGCACATATATAATTCCCAGTTTCCATACGAAGACTATGCGTTTAAGTCTT
TCACAATTATATTTCCTTTCAGATTAACGTTACCTTAGCGTTTAAAAGTAGCGCACATCG
ATTGTGCGGCCGTCGATACGAGTCCTGTCGAACATTTTTATAGCTCTCTCCGCATCCCAT
TCCTTGTGGAATCGAACGATGGCCGTATCTGGAGCAGTCATTTCAGCGAACTTAACATCG
CCACATTCACTGAACTTCTCTCTAATCAATTGCCAAGTCACTGTCTGTGGTAAATTGGTA
ATTATGACCATGTCTGATGGTTTGTCCCTAGTGGATTGTTGGACTCCAGTGTCGCGGCCA
TATCCCTGGTTCGGTACTGAAACACCCAACGGTCTGCTTGTACCTGAAATGTTCGAAAGA
GGTCCAGAATTCATCTGATTGCCACCCATAACTCCAGAAGTAAGAACATTAGAATTCATT
TCATTGTTTCCGATCCCCAAACTAGCTGCTTGGTTCACATTTGCCTGTGCTGTTAGAACT
GTTGCTAAATCGTTAGCTGTCAAACCTTGTTGGAGTAACTGGTTTTGGAGTGCGCCTAAG
CCAGTCAATCCCAATGCCTGTAGGCCTAAGCCTCCACCAAGAGCACTGTTGGCATTCAAA
GCATTCGCAGACAATCCAGATCCTAAACCATTCAATGCAACACCAGCCGCTGTTGGAACT
GCACCCAAAACTCCAGCACCTATAGTAGGTGCTGTATTGGCCAAGTTCATGTTAGTTGTG
TTGTTAGCCTGTGGTAAATTTCTAGCTACGTCACGTAAAGGCTCGCCATTCGGTCCTAGT
CCCATGCCGATTCCTTTTAAGCCTTCAGGTAACCTAAGTTCTCCCTTGTCTGTTACTCCT
CTGTCCATACGTACTGTCATTCTTCGTTCATACAACATTTGTTTATCAAACATTGAAATA
GCCTGTACTGCTTCAACTGGGTGGTCATACTCAATGACAGCAAATCCTCTACTATTACCG
TCTTTATCAACAGCCAAATCAATGTTACGTACTTTACCAGCCATTTTAAATACCTCCTTA
ATTTTGGCTTGGTCAGCTTTGTAATCCAGATTTGCCACAAACACTTTCTTCACTAAAGGA
GGTTGAACATTGATAGATTCCAAAAATTGTAAACTTAATCCATATGTGTTTAAATTCTCT
GGTTCTCTTGGCTTATTAATTCCCCAATTGTCTTTGTCATCTCTATTATTTCTCCCTTCT
CTATGTTGTGGTCTAGAAGTGTGCATTCTTCTTTCATTTCCAGTTTCTTCTTTTAGAACA
AGTTTTCGTCCATTCAACTCATACCGATGCATCACAAATAGTGCCTTCTTCATTGCCTCT
GTGTTTGTAAATTCAACAATACCACATCCTCTTGCTTTTCCACTGTCATCGGTCAACAAT
TCTACATAAGCCACATCTCCAACTTTCTCTTTGAACAAATCTTTCAGTTCCGTCCAACGA
AATTCGTATGGTATGTTTGATACAAATAAGCGCCTGCTCTCGGTGCGATCTCGGTCTGAC
GACCGGTCTCTGTTGGCGTCTGAGAACCTCGATGGCCTATCACCGCGTCTCGAGCGGTCG
CGTTCTTTTTCTTTCTGAAGATCCATGTC
(1889 bp)

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