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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13692_c0_seq12
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_M-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.98 TPM:4.00
ORF EntryO_BomoSK15411_complete:A_BomoSK_comp13692_c0_seq12
Sequence
(Nucleotide)
GCGGATGCACAGAAAGTGAACAATAAAAAAATTAAATAGATAAAAAAATATTTATTTTAT
TAAAGCTTCACGTATCACAGGTTTTTCAATACATAATTTATTTGCACACTTTTTCTTTTC
TCGTTCTCATGTTTTCTGGAACTCTAATTAGGCTCAAACTCTCTTCTCTCCTTCTCTTCT
CACACTTCCAGAAAAGAAAAGCAATCGACTAATTACAAAGGCACATATATAATTCCCAGT
TTCCATACGAAGACTATGCGTTTAAGTCTTTCACAATTATATTTCCTTTCAGATTAACGT
TACCTGAAATACGCGAGAGTGTTATAAGATAAAGTTACAACTCAATAATTAACGGCAGTA
ATGAATTGCATGATCAACGCCCATTTTCCTTTGAAAAAGACACGAGAAATCCGTCTGGTC
ATTACGAAATACATAATTTCATCAAACCAAAAAAAAGCAATTAGTACTTTAAAATGAAAG
AACTTTAATACAATCGAGTGCCAGTCTTTGAACGGGGCTGTCGGAATGTGAGGCGACTCA
ATTTTCAAAACATACCAACCGACCCGACAAATCCTCCCGCCGAAAGTACAGACGCGGCCA
GATTACACACACATCCACAGAATTTCATCGCTTCAAACGTTGGAATTCGTAGATTTCTCG
TCTGTTGAAAACACTGTTAACATAATCAACGATCTAAGGAAAATACAAATCACTCTATGC
ATGATAAACGAGATGTAACTCGAGATAACATCAAGCACAAAAGATCTATAGAAAAACCCC
ATGCAAGCCCAACAAAAAATGAAATACCTTATTCGATCACAACACTTACCAAATAAGACA
CAAACCACGCCGAAATTAACTTCCGCATTGCCAAGCCAAAACGATAAATCTTCATAATAA
CATTTTGTAACGAAATCTTGAAACATAATCGGCTAATAATAATATTTAAGTTCGCATTTC
GTTGTAATTATTACTCCACTAACAACTCATTCCATTTGCCGATGATTTCTTTTATAATTG
GTTTTTTATTGCCAACAAACGATACTCTAAGGAAACCATTCGTTCAGCCACCCTCGAGAC
ACGAACTAGCCGAGTCGCAGAATCACTTAGATCAGCCGTTAATGGCGCGTCCTTTTGTTT
ATTTCACTAGCAGTATCTTAAACACAGTTCACTACAGTTCATTCAATTGGGAAACGAATC
GCATTAATTCTTCCGATGACCAATAACCCAATTTAGGTAGGTATGCGATTTCACCAACAA
CATCACAGATATACGTTTCGCAATTGATCACTTTTCCGCTGTATTCCAATTGATTAATAA
TAACGCGACTCTAATAAGAACTCGACGGTTGTGACCATAAGTCCCAGTCTATTTTAACCA
AAACGACACCACGAATAAATTACAAGTCCGAGGATGTAAGTAAACACTTTTTTCACAAAC
TCCGCTAATAAAATAACTACATTAAAGACAACAATAAACTACAACCTATAATGTTATTTT
ATTTTATTGAATTCTCTCATCAAATGGTACAGCAAAAATTACGAAGCTTACACTAAGATT
AAACCTAAAAGTTAATAAAGATTGTCAAAGGATAAACATCATTTGAAAGATATTGGACAC
TTTATCACGAGACACTACGACGTGGATTAAAACAGCACATTATCCGGGCAGCCGATTGCA
TACAAACCCCCACAAGAGAACGACTTGAACCACTTTCTCCTTAGCGTTTAAAAGTAGCGC
ACATCGATTGTGCGGCCGTCGATACGAGTCCTGTCGAACATTTTTATAGCTCTCTCCGCA
TCCCATTCCTTGTGGAATCGAACGATGGCCGTATCTGGAGCAGTCATTTCAGCGAACTTA
ACATCGCCACATTCACTGAACTTCTCTCTAATCAATTGCCAAGTCACTGTCTGTGGTAAA
TTGGTAATTATGACCATGTCTGATGGTTTGTCCCTAGTGGATTGTTGGACTCCAGTGTCG
CGGCCATATCCCTGGTTCGGTACTGAAATGTTCGAAAGAGGTCCAGAATTCATCTGATTG
CCACCCATAACTCCAGAAGTAAGAACATTAGAATTCATTTCATTGTTTCCGATCCCCAAA
CTAGCTGCTTGGTTCACATTTGCCTGTGCTGTTAGAACTGTTGCTAAATCGTTAGCTGTC
AAACCTTGTTGGAGTAACTGGTTTTGGAGTGCGCCTAAGCCAGTCAATCCCAATGCCTGT
AGGCCTAAGCCTCCACCAAGAGCACTGTTGGCATTCAAAGCATTCGCAGACAATCCAGAT
CCTAAACCATTCAATGCAACACCAGCCGCTGTTGGAACTGCACCCAAAACTCCAGCACCT
ATAGTAGGTGCTGTATTGGCCAAGTTCATGTTAGTTGTGTTGTTAGCCTGTGGTAAATTT
CTAGCTACGTCACGTAAAGGCTCGCCATTCGGTCCTAGTCCCATGCCGATTCCTTTTAAG
CCTTCAGGTAACCTAAGTTCTCCCTTGTCTGTTACTCCTCTGTCCATACGTACTGTCATT
CTTCGTTCATACAACATTTGTTTATCAAACATTGAAATAGCCTGTACTGCTTCAACTGGG
TGGTCATACTCAATGACAGCAAATCCTCTACTATTACCGTCTTTATCAACAGCCAAATCA
ATGTTACGTACTTTACCAGCCATTTTAAATACCTCCTTAATTTTGGCTTGGTCAGCTTTG
TAATCCAGATTTGCCACAAACACTTTCTTCACTAAAGGAGGTTGAACATTGATAGATTCC
AAAAATTGTAAACTTAATCCATATGTGTTTAAATTCTCTGGTTCTCTTGGCTTATTAATT
CCCCAATTGTCTTTGTCATCTCTATTATTTCTCCCTTCTCTATGTTGTGGTCTAGAAGTG
TGCATTCTTCTTTCATTTCCAGTTTCTTCTTTTAGAACAAGTTTTCGTCCATTCAACTCA
TACCGATGCATCACAAATAGTGCCTTCTTCATTGCCTCTGTGTTTGTAAATTCAACAATA
CCACATCCTCTTGCTTTTCCACTGTCATCGGTCAACAATTCTACATAAGCCACATCTCCA
ACTTTCTCTTTGAACAAATCTTTCAGTTCCGTCCAACGAAATTCGTATGGTATGTTTGAT
ACAAATAAGCGCCTGCTCTCGGTGCGATCTCGGTCTGACGACCGGTCTCTGTTGGCGTCT
GAGAACCTCGATGGCCTATCACCGCGTCTCGAGCGGTCGCGTTCTTTTTCTTTCTGAAGA
TCCATGTCAGCGGAATTTATACTTGTTCAGAGTGCAAAGTACTATTTACAGTGGTAGTTG
TATTTAGCTGTTGTAAGATTTGTAGCTACAAAATTACAAACCAAAGAAATTTTGGAATTT
ATGTAGGTACCTAGTCAAAACACGAT
(3386 bp)

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