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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13684_c0_seq8
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_transcriptional_regulator_ATRX_homolog_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:0.41 TPM:0.41
ORF EntryO_BomoSK15327_complete:A_BomoSK_comp13684_c0_seq8
Sequence
(Nucleotide)
GTGAATTTGACACATCCGAAAAAATCGTGGTGTCTATGGTTTTTTTTTATTTGTAATTTC
GTTTTGCTGGGTTACGTTTAATTAACTTTGCCGTTTTCGCATTATTTGTACGAAGTGCAT
TTTAGCTGTTTTACTTTGATCAAGTCAAGTGATAATATAAAAAGCATATTGTTTTAAATG
AAAATACGACTGTGCCGGTAATAGTCGCAATAGCGTGAAATGGCGGCGGAGGTACCCGTA
AGCGATGTGTTATGTGAAGCGATGGAATATTTGTCTAAACTGGGACTGAATTTACGAACT
CGATCGGAAAAACTAAAAGAGAAAAAAATCAGAAAAGACAAATTAAGAAATTCTCATGCA
CTACAAAAAGCAGCCAACAAAGTGCTTCTTATATGTGAATTGTCAAAAAAATCACTTGAT
AACGTTGAGATAGGTGTTCGTAAAGTACTATCCATTGTCGACAAATCACAAGCATCCTAC
AACGATGGCGGGAAAAGTAACCACTCAATGAAAGAAAAAGACGAAAGTTTTTATAAATTT
TTTGAGTATAAATCCCAAAAGTTAAGAGTTCGCAAAAGTGTGCCATTAAAACATTATTTG
TCGGTAAAAGTACACGCAAGAAGAATGCCCTTATCTATGCTCGAAAAATATCCAATAAAT
TACGATTGTAAATTATACAGAATAAGGAAAAAGAAAATTCTGACCACATCAGAGAAAGGT
AGGAGAACAAGTGATAGTTCGGTTAATTCAGAAAAGGAAACAATACACAATGATACAGAC
CAACCACAAGTTACTGATGCTTCTGAGCAAGGTCAATTTCCAGACACATCTTTAGAAACA
TCTCATGTGTTAGATAAATCTGGACCAAATATAGAAAATGAAGAAGAAACAACATTAAAT
GTAGATTCATTACATTGCCAAATTGACACCTGCAATTTAGGCAATAATGTTGATGAAGAC
AGTCATAATGAAACTGCGAAGCAATATACCCCAGGATCAGAAAAATCTGAATGTGAACAA
GCAGAAAAAGATAGTTTAAAGAAACATAAAAATGCAGTTTCTGAAAGTATACAGGAGTGT
AGTAGAACTACTGAAGTAGCAGACAACTCAAGTAATATGATAGGTGTCAATAATTGTTCT
AGAGAAACAGAAGACAAAAGTATTGATGGACCTGATGTAAATAAAGATCTTGTTATTACA
ACAGAAATGCTACTGGAGACTCTATTTGAAACAGAAACAGAAAAACCAAATGACGTAATT
CTAAGCGAAAAAGAAGAACAAAAGAAACCTTTCATTAAATGTGTGAATTTAAATAAACTA
TTGAAACCTGATCTATACCAAGATGCCAATAAAGGATCCAAAAAGACAGGAGAAAATGAG
AATGAACATAGCGAGTTACTGAACACAAACAGGAAGCAAGATAGTGTTCAGAAATCCACA
AGAGTTGTTTCTGAAACAGGAAAAACTACAATATATGATACAGAAGATAACTACTGGAAG
AAAAAAAGAGAAGAAGCTAAAGCATTTAAATCAAAACAATTCGTAATTTCAATAAATAGA
CTACCTAAATTAACTATCGCATTTCTACATGCCAATAAATTAAAAAGAATTGTTCAAAAT
GGATTAACTGTTTGTAAAATTAATCCAGAAATAGATAAAACAACTAAAGACATCTCAAGA
GAAATAAAGTCAGCCCTCTTGAATGAGTCAGATTCTGATGGTTTTACTGCAGGAACACCT
AAAACTTTATCTGCAGTTACTGAAAAAATCAAAGATTCCTTACTGATTGAGTCTGAAAGT
GATGCAGGAGGTAAACATTCAGCAAGTGAGAATTATAGTTCAAAAAATTGTGAATCTCAA
AAAGAGGTCCATAAACATAAATCCAAAAGAAAAAACAAAGATCTCAAGTCTATAGAGATA
GACAAAATTAATGATTCAGAAGGTATTAAAAGTTCTGAAAATGATGAAGAGAAAAAATCT
TATGACACTTCAAACATTCAAAACAGTAGAACGGAATCAGTGAAAACTTCTTTATTAGAA
GATTCTGATTCCAACTCCAGTAAGAAAACCTTAGTGATTAGTAGAACAAAAGAGAACTGT
TTTAATTCTAATGATGATTCTAAAGAAGATGATACTTCAAAATATAGTGAATGTAATGAA
AACAGAAATGCTTCAGATAGTGCTAGTAAAGACAAAAATACTTCAACATTAAATCTAGAA
ACTATAAAAAATCATACAGGTGATGAAAATAGTGATAATAGTTCAAAAACTCCAATTAAG
TCTAATGATAACTCATGTGAAACTCTTCATAATAATGAGAAAAAATTAACTCCTCAATCC
AAAAGGAAACGAATAATGGAGAGCATGAAAGCAAAGAAAATGCTCTTGTCGTATTCTAGT
TCTGATGAGGAAATACAGCAGAAAACAAGGTTTAAAAAAATCAAACGAGCATTGCTCGAT
GAAAGTTCAGATGATGAGAGTAACTCAAATCATCAAAAGCACAAGGAAAAGCAGAATAGT
TCAGAAATTTCATCATCCTCATCTGAACGAAAGAAAAAGCAAGATTCAAAATTGGATATA
TCAAATAAAAAGGGCAATTCCAAAAACCCTAAAGCAGAGAAAGAGAAAATAAACAATGAG
GACTCCCATAGAAGCAAGATGGTCCGATCTAAGACGAAGCCTGGGAGCAGCATCAGCCAA
AATTCAGACACTCAGGATGACAAAGATGTTGATAGGCTTACAAACTTGGATGCGTTAGAG
AAACCTCGTCGACGTGAAACTGAAGATAAGAGGAGTAGAACAAATAACAGAGCAAGATCT
AAAGCAAACGAAATAATCGGTGAACAGATGCTCGAGCCGGACACTAGTTCTGATGTTGCT
TCAGAAGCCGGGAGCGATGTTTGTGAAGAAATACCACCGGTAACATTTAACAATGGTATT
GAGCATCTCAGTAAAAGTGAACTGCTGGGAGAAAGTGACTCGTCGATTTCAAATGAAAAA
GAAAAAAGTTCAGAGAACACACCGACAGTGGACGAGTCTGAAGATGACAATTTAAAATCA
AAACGACGTAAGGCGAACGCCATCTCGTCGGACTCTGAAGCCGGTTCGTCTCGCAAGAAG
GAGGACCGAGAAGTCAAGCTGAGCGACTTCGAGGACTCTGAGGAGAGCTCTGAATCCAAC
AAGAAGAGCAAACGGAAGAAGAAGGGAAGTGAAAGTGACGCGTCCGGGTCTTGTTCCGAT
GGAAATAAGAAGAAACGGCGTAGAATCAAACAGATAAATGAGAGCGATTGTTCAGATTCG
GAAGAAGAGACTGAGGGTAGGAATAAACATGGAAGGAAAAATATACGTAAGGTTATGGGT
AAAGACCAGCTGGAAGAGGCTACCAAAAAAGCGGCGCGCCAGGAGAAGGAGAGGATTGCT
AGAATCGCTGAGAGACAGAAATTGTACAACAATCTGGAATTTGATGAATCTGGAAAACCT
GATGAAGTGGTCTTGGAGAAGGTTGTTCTTGATTTCGACCCAGAGACCAAGGAGCCGCTC
ATACAAGTTGACAGAGGCCTTGTCAAAAAACTAAAGCCACATCAGGCAAACGGAATAAAG
TTCATGTGGGATGCGTGCTTTGAAAGTGTGAAACGTATAAAAAAGGACAAGGGCTCTGGG
TGTATTTTGGCACATTGTATGGGCCTGGGAAAAACGTTACAAGTGATATCGCTGACGCAC
ACGCTGCTGACGCACGGGTCGCTGACCGGCGTGAGCAGGGTGCTGGTGGTGTGCCCGCTG
TCCACGGTCCTCAACTGGGTCAACGAGTTCCGCATGTGGTTGAAACACGCCGAGAACAAC
TTTGAAGTCGACGTGTACGAACTCTCCAGGTTCAAACAAAATTCAGAACGCGCATTCCAA
TTGAGTCAGTGGTACAAAAGCGGAGGTGTTTGCGTTCTCGGCTATGAAATGTTCCGGAAT
CTCTCAGCCGACAACACTAAGAAATTTAAGAAGAAAATGCTCAAGAACTTCCAGGAGAGC
TTGGTTGACCCCGGTCCAGATCTAGTAGTATGTGACGAGGGTCATCTTCTGAAAAACGAA
AAGACAAGCCTCTCGCAGTCTATGAACAAAGTGAAGACGCTACGTCGCATCGTACTTACT
GGGACGCCCCTACAGAATAATCTGAAAGAATACTACTGCATGGTGCAGTTCGTGAAGCCG
AACCTGCTGGGCAAGTACAACGAGTACCTGAACCGTTTCGTGAACCCGATCACCAACGGG
CAGTACACGGACTCCACCGAGCACGACATCCGCGTCATGAAGAGGCGCTCGCACGTCCTA
CACAAGATGTTGGACGGAGCAGTGCAGAGGAGGGATTACGGAGTGCTAGCGCCTTTCCTG
CCTCCGAAGCACGAATACGTACTCTTCATTACTCTCAGCGAAGTACAAGTCAAACTGTAC
CAACATTATTTGGAAAACTATTCACGAAGGCCGATGCCAGGGAAATCATCAGGATTCCTG
TTCCCCGACTTCCAGTCGCTGCAGAGGATATGGACGCATCCGCTCGTTCTCAAGTACAAC
TCTGAACGCTACGAGATTATGCAGCAAAAGAAAAGAGAAAGAGAAGAAGAAGACTCCGAA
GGATCACTTGTGGACTTCATTGACGACGACTCCACGCCTGAGGAAACTTCAACAGAGGAG
TCTTCCGACGACTCATCAGATGTGAGTGACGACAGTCAAAAAAAGAGTAAGAAGAAGAAA
GCAGCTAAGAAGAGCAAGGCGAAAGACTCTAAAGCTTCGACGCGTCGGGGGACCAGGGCC
AACCCAGTGGAACAAGAAGATCATCATTCTGACATCGAGGAAGTGGTTGAGGTAAAAAAT
GAAAATCCGACTGAGTGGTGGATCAAACTTGTCACCGAGGACGAGCTGGAAGACATGCGG
CACTCGCATAAACTTGTTCTGCTCTTCGACATATTGAGGCAGTGCGAAGCCATCGGAGAT
AAACTATTGGTGTTCTCACAATCTCTGTATTCATTGGACCTCATAGAACATTTCCTAGGT
AAAGTAGACGACGCGACTCAGGCAGGCCGGATCGATGAGAAACTGGGCGGACACATGGGT
TCATGGTCTCCCGGTATAGATTATTTTCGTTTAGATGGCTCTACGTCGTGCGAGAACCGC
TCCATTTGGTGTAAGAATTTCAACAGAGAAGATAATCCAAGAGCAAGATTATTCTTGATC
TCTACTCGGGCGGGTGGCCTCGGAATTAACTTGGTGGCGGCCAATCGCGTGGTCATATTT
GATGTGTCTTGGAACCCTTCGCACGACGTGCAGAGTATCTTCAGAGTCTACCGATTTGGA
CAGAAGAAACCTTGTTATGTGTACAGGTTTTTGGCCATGGGCACAATGGAAGAAAAAATC
TACGAGCGGCAAGTAACCAAACAAGCCATCTCGAAGCGCGTGATCGACGAGCAGCAGATA
GACCGGCACTACGCCGAGAACGACCTCGCCGAGCTCTACAAGTTCGAGCCCGCCCCGCTC
GCGCCCCGCGAGCTCCCCGCGCTGCCCAAGGACCGGCTGTTCGCCGAGATGCTGCGGGAG
CACGAGCTGCAGATTTACAAATATCATGAGCATGACTCACTATTGGAGAACAAAGAAGAG
GAGACTTTAACCGAGGAGGAACGTAAAGCCGCCTGGGAGGACTTCGAGAACGAAAAGAAC
AGACCGCCTCCCGCGCCCTTCCCCTCCGCCTGGCCCATGCACAATGGAATGATGCCGGGA
CTACTGGCGCAACAGCAGCAGCTGGCGTACGCGGTGGCGGCCATGCTGCGCAAGGACATG
CCCAACATCACCGACAGCCAGATCCGGGACATGTTGCCGATGATATACAACTCTAATCCT
GCGGTCGGTATGATACAGAAAATGAGCGAAATGTATAAGTATGCGCAGCCCAGTATGATG
AATCCTGCAATGATGGGCTCTGCTATGAACGCCGCGACCGGCAGCGGCTCGAGCGGCTCC
AGCTCGCTGCAGTACGAGCCGCCCTGGCAGAGACAGCAGCAACAACAACAACAAATGCGA
CTCCAACAACTCATGCAACATCAGAACCAAATGGGTGCGAAGTACTACGCAGGCGGACTG
GGCAGCCGCGATCCGGTGGCCATGGCGCTGCAGCAGCAACGAGCCCGCGACCTCATGCTG
GGCGGCACCCGGCCCCGCATGAGGTCG
(6207 bp)

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