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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13680_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
Ontology
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
Transcript
Level		FPKM:13.01 TPM:13.09
ORF EntryO_BomoSK15282_complete:A_BomoSK_comp13680_c0_seq1
Sequence
(Nucleotide)
TGAGAGTTCAAAAAATATTTGAGATTTTGGCAACACCGATTTGAACGTCCTTTAGTCCTT
TGCCTTCGTTACGAAAGTAACCTAAAATGTATTCATTTTATATTCAAAGAACATAATCGT
GTTGTTGTGCATTACACTAGACCTGATTCTTTTGGAATAAATAATAGTATTTAATAACTG
TCAAAATGTTGAGCTAGGCGGATAAATTTGATTATGTCATATTTAAAGGTGATACACTGT
ACCTTGTGCCTGAAACATGGATACGTGGGAGTTTACTCGAAACCAGTTTTATTTAAAATT
ACTAATAACACACTCTTCCAGCATCTTGCCAGAATATCAACAGCACAAAACTGGAGAAGT
AAAGTTCCACTTAAAACTCAGACAACTGCAACGGTAAAGAATAAAGTCACCCAAGACACC
AGAGTATGGAAGGAAACACCATCATATGACAGGAAGAGCAATACGGGACAGTATTGTTTG
ATGCTATCTAAATCACGGTTAACATCATTAGTTGTGTTGACGTCTATGGCAGGATACGCA
CTAGCACCTGCCCCGTTTCAACTTACTACCTTTGCATTCTGCGCTGTGGGTACTGGTCTA
GTATCAGCTGCAGCAAACTCTATAAATCAGTATCATGAAGTACCATTTGATGCCCAAATG
TCGAGGACAAAGAACAGGGTGCTTGTCAAAGGTTTATTAGAGCCCGTCCATGCAATAGGT
TTTGCAGCATTGACAAGCAGCGTAGGCCTTGGCGTTTTGTATTTTGGGGTCAACCCCTTG
ACAGCTGCACTAGGAGCAGGAAACCTCATCCTCTACACCTCAGTGTACACTCCAATGAAA
AGAATGTCCATACTTAACACCTGGCTTGGCTCTGTAGTTGGAGCCATACCCCCCTTGATG
GGATGGGCGGGCTGTACCGGGGGACTGGACGCTGGCGCGCTGGTGCTGGGCGCCTTGCTC
TACTCGTGGCAGTTTCCACACTTCAACGCGCTCTCTTGGAATTTGCGACCAGACTACTCG
CGGGCCGGGTATCGAATGATGGCCGTCACTAATCCCGCACTATGCCGAAGGGTTGCGCTT
AGACACACAGGAATAATCACAGCAACATGCCTGGTATCACCTTATATAGGCGTTACAAAC
ACGTGGTTCGCACTTGAATCATTACCATTGAATATTTATTTTATGTATTTAGCATGGCAA
TTCTACCAAAAATCAGACAGCGCAAGTTCGCGGAAGCTATTCAGATTTTCTCTACTTCAC
CTACCAGCATTAATGTTGCTAATGCTAGTAAATAAGAAGTACTGGAGTTCGAGTGACACT
CAAGAGCAGACCGACACCAAAATCCAGGACGTAGGCATATTAGACAAGAGAATTACAGTA
CTACCTCGAGGACCGGTCGTTGTGGCCCAAGGAAACGACAAACAGTGCTAATTATTTTAC
GTTATATGTAGGTAGATTTTATTTGCTGTACATAATGTACAAATGTGATCAATGTAGAAG
ATTGTAAGTTATCTATTACGAGATTTGAATTGTAACCTCAAAACAAGGTTTCGGAATTTC
ATTTAAATAACACAAAATTCCTGTATGTGTTACTGCTGTACATATATTTACTAGTAACTA
CTAACTGAATATTTCCTAATCTTAATTTTGGGGTTATAATACTTTTTTGTTATTTTATTT
TTAATCGTGTTATTTATGATTTAAAAATAAATAAAATACACACAGATTATGAATTCTTAT
TTTTCTTATTCACTTTGCTTTTTTCGGGAAAAACAATATCGTGTGCTGTGTAAGTGGGGC
ACAGGTTCTTTATTTATTTAAATTTACTTAACTATTATCGTGTCACATTCTCAACTGAAA
ATTTATTAACAACATACATACAAAACACTCAGACCTGTTTTTTAACATTAGACGGACAAA
TTATGAGACGACACAATCACATACGTAATTATTATTAACAAGCCGCTGTGGCGAATGAAA
CCCGTTTGAATCCTTTGTATCAAAACGTTTGCTTTTTTATTTTTTCGCTTTCTTTGCGCT
GTTGCCGTGTTCTCTGCTGTCATCGCGTGACCGTTTGTGTGATTTATGGTCACTAGAATG
TTTCTTGTCTTTGTCTTTACTAGAGGACTTATGGTCACTCTTGTGGTGTCGATCATGGTG
GGATGATTTGTGGTGCTTATCCCGGTTCTTGGAAGGGCTGCTACTGTTCTTTGAAGGGCT
TTTATGACTGGAGCTCTTATGGTTTGAGCTCGAACTTTTATGATTGGAACTAGAGCTTTT
GTGGTTTGAACTAGAACTTTTATGATTAGACTTGTCATGTTTGCTTTTCTTGGCGGCTCC
CTCATCAGAGTCGTACGAGCGTTGTTGGTTTCGTCCTTTACGTTTCCGGTCGAAGTCATC
TCGATCGAAGTTGCGGTCTTTTTTATCCTCTTCGGCAGCTTCCCGCTCTAAATCTGACCA
GTCTTTACCGGATTCTTCGTCTTCCTCTTCACTATCACCCGAAGCGTCAGATTCATCAGA
CGCCTCAGAATCATAGTCAGACCCTTCAGATTCATCAGACTCAGCGTCCGTAGGCTCGTA
CGCTTCATCTTCATCTTCACTATCTTCCTCCTCTTGTTCATTTTCACCATCAGATTCTGG
ATCCAAAAATGACCAGCCACCATTTTCGAAGAAGCCCTCAATGTCATCTGTTATAGTTTT
CATAACTTTGGTCCAGTTCAACGATTGTATACCCTCCGAGTACCGGATATCACAAGAATT
CAACCATTCTTTGACATGATCCAGCATGTCCATAGGCACGGCATTAACCATGGCCACTTT
CTTGGCGTAGTCCTTAAATACGAAGACCATATCGAAATTTTTGAGGTGAAATTGTACTCT
CTCAAAGTGGACGAGCTCTACATCTTCTAATGCAATCACGAATGGTGGCCATTCAGTAAG
ATTGACAAGGGCTCCGGAGGTAGGCTGCAGTAAAACTGTACTCCGATATGGAGCTCCAGG
GAAACCAAGCTCTCTGAAAGGTGTATCGAACTCGACTTCTTGCTTGGTCATGTTCTCGAC
TCGTTCACAGAAGCTCTTGAAGGCCACCTTCAGTTTGTGTCTCAGCTCCCGTTCGCTCTG
CTCGGCGGCGAGGTCGTCGCGGTCGTGCATGTGTTGATGCTTTCCTAAGTCTGTGGTTAT
CTCACCGACTTCGGTGTAAAATTGCACGTCCACATGCTTTTTTTTACCAAACATAATGGC
ATGTTTCAAATGGAAATGTAAAAGTATAATCATTTCTCCATCACAAGGTTGAAAGAATGC
ATTCTTTATATTATTGTACAAAATGTCCACTTTATCGCCTCGTACCGATGTGAATCTAAA
GCCGTTTGTGTGAGCTTCTAATGAACCACTCATTCTCTTCGTAACAATATTGGGACGTAT
GTACAAATCTTTTAACTTAGGATTTCCTTTGTTCTGTGATAATATTAACGTGTCCTGTTT
GACCAAATCTTCCTTTTCACGTTCTTCTGCTTCTCTGGTTTTGAATTTTTTCTGTACTTC
TTTAATAAGTCTAAATCCAGTGTTCAAGTTTGACGAAGGCGGCGATATCTCACCCGGTTC
TTTTGTGTTTGTACTTCGGTATGTAACTTCCTTAACGAAGGTGGCGTCCGGTTGAGAGTA
ATTCCCGCCTTCATTCCTGCCCATAGTGGCGCCGGGATGGAAAAAGTTAATTCTAAGGTA
CGTGTAATCGCCTTCCACTGACTGCGAGATGTTCTTAATTGTAGATATATGGAATGGTAC
TGGGACACCGAATATTGGCAGGATTACTGTTTCGTATTTACGATCGACATATAATTTTAA
TTCTTTAACTTCATTCTCACGTGGCATCTGACTAATACTCTTGTATGAAACTGTGCTTTT
CCTTAGTTTTTCTGTATCTTTACCGGTCGACTGTTTGGCTAATCTTTCTTTGGCCTTTTC
ATTCAAAGATATAGCAAGTTCACGCTGATGCTCCTTACGTTTTTCCTCAGATGAATGCTC
TGTTCTCAATTTCGATTCAATCACTGCAGTCCTTTTGCCTCTACCGAGTATTTCAGTCTT
GTTTTCTTTCTCCTCTTCTTCTTCTTCATCGTCATCTTTCAAGAATATTCCTATATTTTT
TACTTTTTTCTTAGACTGTGTTAGTAGAGACGCTGGCTGCTCTTCGTTAACTAATACTGT
GTCACCAATGAAGAGCGCGTATGTCTTCCCCTCCTTATCTGAGGCATTACTGTTTGTTAA
GTTCGCCAAGCCAATGTTTATGTTGAAGACCATTCCTTTTTTCGCGGTAACATTTGTTTT
AGGTCCAATAATAATGGAACTTTCACGAAATTCTATACCCATAGCGAATCCAAAACTCTT
AGTGAGATTTTCAACTAAGTTAGGTTTCTCTTTCTTGGCTAACGCTAGACCAGCTTCATA
AACTGTAGATAATTTCGCTCCAGCTACAAGACTCTTCATCACCTCTTCTTCAATATTTAA
CAAGAAATTGTAATTACTTTGTACTTCATCAGTTGGGTTGACCAGTAATGTACGGACTAT
GTTCGAACAATATGATTTGTATCTAGCACCTAGTGAACATACTATGGCGCCAAAGTGTAA
GTGGTTTTTATCAGATACTGCACTGAATTTCAAACTATAGTGTCCGCCTGACTGTATAAT
AGGAGGATAACACATGTCAACTTGACTTGTATCGACTCCTGTTACATATTTCTTATCTGA
AACTGCTGTTTCCACACCTTCAGCAAGTTTTGAATGTTTGACTTTCTTATCTGAATCAAT
AATTTCCATTATCTGATCTTTTAAGTATTTTGTGAAGACATCCACTGTGACCAGACATGC
TTTTTTTATTGTAATAATTTCAGAGTCTTCTTTTGGCGCCATTAATAATGCAATCGCTGA
ACTGACATCGACATTTTCAAACTTCTCTCCCTTCAGAACTGCTTTCCAACTTTCACAAAA
TTCACCTGGATAATTGTCTTTCACGAAAATACCCAGTGTCTTGCCTGATTTTGATTTCTT
TATTTCTTGGAGAAGTTTGTTGAAGTTTTCCTTGTCTTTGTCATTTCTGTCTCTAATAAG
AAGTTTTGCTGGGGGCAATTCAGTTTCATCTTTACCATTTTCTATTTGTCTCAGGAATTC
AATCTTCTTCTTACTGGCTAAAAAACACATGCTATGCTCTGTTAAGACAGTGATTGTGTC
AGGTAACTCATATCCAAACAGCCATGTCTGAAGTGATGTTGATTTGCTGTAGAGTGTCTC
TTCATCTACTCCTACACACGACACTAAGCAATCCACCTTTGACAGGGCATCATCACTCTT
AGGATCTGAAGCTACAGCCTTCCAGGTCGCATACAGCTTTTTCATGCGACGATAAAACGT
CTCTTTGTCCAATGATATATTAGACATTGTGAAAAATATTTAAACATAAACTGCAACTAA
TAAGCAACGTTTTTAAGCCGCAAAGTACAAATAATCACGACTCCACGACATAACACTCTT
TTGACAGAAAAC
(5532 bp)

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