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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13666_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.51 TPM:3.53
ORF EntryO_BomoSK15232_3prime_partial:A_BomoSK_comp13666_c0_seq1
Sequence
(Nucleotide)
TACAGTTATAACATCGGGGGCCTTTTCCTTTTGGCTTTGAATTATTGTTAGAGGTATTTC
TGTGCTTCGTAAAGAATGCAGTAAACTCTGAAACTTTCACTTCCTGCAAAAGTTTTGTTT
TTATAAAATCTGATGAAATGATAATGCTGGAACTTTCCAGACCCATGATCATAGGTTTGT
AATTATCCGGTAAACCCGCCAGCATGAGTGTTCCAAGCCATTCGTCACCAACGTCGAAAC
CAATATTTCTTAATTTATGTGCGGTACTCATAATTTTATTCACGTAATCTTCGATACTGG
AGCAATTGTCGAGTGAAGTATTTATTAAATCTTTTAATAGACCAACTTTTCTTGACAGCC
CGGAGTCCTCAAAAGCATTTTGAAGGTTTATCCATACTTCCTTTGATGTTTTTGCATTTT
CGATATGGATGTAATTAATCGGTTCCACCAACAAAATGATCTTTGACTTAGCTTTAATAT
CTTTCTTAACATCGACATCAGTGCCTGGATCAACACATTGCCACAATTCTTCGTGTTCTA
AATATGATTTGATAGCAAATCTCCATGTCGAATAGTTTTCCCGGCCGGCTAATTTCTCAA
TTTGAAGGTTAGACGTAGCCATTATGTCTGGATCGGATGAGTTTTATCGCCGCAATTACA
ACTAATTGGTTTAATTTGCTATTTATTTGCACTAAAATTAATTTCAGTTCTATTTTGAGT
TAATGGGGCGGCCCATAACCTGTTGAAATAATACTCCGGAATAGAAAATGTAACGGTTTA
ATGCACAGTAACAAGATGAAACACGCTAGGAAAAGGAAGGACGGTGGCGTCACACGTGAG
CAAAAATGTGAACCATTTTTGACATTACAGATAATATAAATTATGTTTACAATTCTCCAA
CATCCTCCCTTAAACATAATCCCATCCTAGATGAGCAGAAGGCCAGTTTCGTGTGGGATG
TTGCTTTAGTGAGAGCATCTGCAATCATCTTGTCGGTCTGCATGTAACGTACCTCAATGG
CCCCCTCCAGAACCTTTTTGCGGACATAGTGATGCCTCACATCAATATGTTTGGTCCTAG
GATGGTATCCATCAGAACCTGAGAGATTTATAGAGCTTTGATTATCGCTATAGATCACCA
AGGCCTCATTCTTCAACTGAGGCCAAAAACTTTCTTGAAACTGCTTCAGCCACATAGCTT
CTTGTACACATGCCGACAATGACATGTACTCCGCCTCAGTCGTGGAAAGTGCTACAGTAG
GTTGTCGCCTGGAGTTCCAGCTAATTGTTCCTCCCTGGAACAAGAATGTGTAACCTGTGC
AGGAGCGCCGGTCATCTTCAGCGCTTGCCCAGTCTGCATCACAGTAACCATGAGTCATTG
TCTCCTCTAGATTTTTCTTATAACTCAATTTATAATCTAGAGTACCTTTTAAGTAGCGCA
TGACGCGCTTGAGGGCAGTCCAATGTCGCATGTCAGGGTTGTTGTTATATTTACTCAACA
TATTTATGACATAGCATATGTCTGGTCTGGTGATATGTGAAACATATAATAAGCAACCAA
TAATCTCTTGATAAGGTATATCATTTAAGATTTTATTCTCCTCAGATTTACTTTGTAGGT
TTGTGTTCATATCTATAGGAGTATTAACAGTTTTACAATCTGACATTCCATATTTATTTA
ACACTTCTTCAATGTACTTTCTTTGATCCAAATAAATAATGCCTCTTGGCCTGTCTCTCT
CTACATGTATTCCAATACAACAATTTATATCACCCAGATCCTTTATTTTAAACTTTTTAT
ATAATTCTTCTTGGATTTCTTGCTTTGAGTCTTGATTATTTGAAAACAAGATCAGGTCAT
CGACATAGACCGCTAGGAAAACCATATTTTCATTGTTGACAATTTTGTAATAAATACAAG
GATCCAATATAGACTGTAACAAACCTATTTGCTTCAATGTAAAATCTAGTTTCTTGTTCC
ATTGCCTGCTGGCTTGCTTTAATCCATACAGTGATTTTCTCAGTCGACATACTTTATCAC
CATTTTCATACATAGGTGGCTGCATCATGTAAATTTCCTCTTCAATATCACCTTGAAGAA
AAGCTGACACAGCATCCATCTGACATATATTTAAATCATATTTCACTGCCAGGGCAAACA
AATACCTCAATGAAGCATGTCTTACTACCGGTGAAAATACTTCAGTGTAGTCTATTCCAG
GTTTTTGTGAACATCCTTTAATTACAAGACGTGCCTTGTATTTTATTATTTCTCTATTTT
CATTGGTCTTTCTCTTGAACACCCACTTACATGGTATAGGGCGCTTGTTAGCTGGTAGAG
AAGTCATTTCCCACGTATTATTTTCCAATAAGGACTGATACTCCTCATCCATTGCTCGTT
TCCAATGTTGGGCATCAGGACCCGACAAGGCTTCCTTGACAGTCAGTGGATCTATAATCT
GAACACACATTAAATTATTATTTTTCTCATTACGTTTTTGATGTGATCTCAGAGTTATAT
TCCTCCCGAAACTGTTATCACTGTCACTTGAGCTGGGATAATAAGTTTCATCATAATTTC
TGTTCACCACACAGCTGTCAAAAGAAGTATCAGTACTTGAAGGTGTTGATGTGACATTTT
CAGTGTCTGTTTGAGAGCTATCATCAACCGGCATCAAAGATATTTCATTGCTTTTTTGTG
CGCGACTTAAACTTGAACTGAGAGGTAAAGTAATAAGCTGAGGCTTTAGGCTAGGTTTCT
GAGTGACATTATCTATGGGACTTTCGATAAATATCACATCCCTGCTAATCACTGCCTTCT
TACTATTAGGATCAATTAATCTGTACCCCTTTGTGTTCTCACAGTAACCTACGAAAACCA
ATTCTTGTGATTTACGATCCCATTTCAAACGATTTTGCTTCGGAACATGTACCATGGCCT
TAGAGCCAAAAATCCTTAAGTGTGAAATGTTTGGTTTCTTACTAGTCCATTTTTCATAAG
GTGTTACCTCAGCCAGAACTCGTGATGGAGATCTATTAATGATATAAGCAGCAGTAGCTA
CTGCTTCGGCCCAATATATTTTCTGCAGTTTTGCCTCAAACAGCATGCATTTTGCTCGCT
CCACCAGACTACGGTTCATTTTTTCAGAAAGTCCATTTTGTTCAGGCGTGTAGGGAGCGC
TGGTCTGGTGCTTGATGCCGGAAGCTGCTAGAAAATCAGAGAAATCTTTATTACAATATT
CTTTTCCATTGTCACTTCTTAACATTTTGATTTTCATTTCCAACTCATTTTCCACCTCAC
TTTTAAATCGTGCAAACACAGATTTAATATCCATTTTGTTCTTTAGAAAGTACACATATA
CTTTGCGAGAATAATCATCTATAAAGGTTACAAAGTACCTTGCACCACCAACTGATGGTG
TCTCCATCGGACCACATAGATCAGTATGTATTATTTCTAGTAAAGTACTTGCTCTCGAAC
CAGATTGAGGAAACAGTAGTCGTGTTTGTTTTCCTTCACAACATGATTTACAAACTGCAT
CAATTTCTTTATTTGTTATAGTAATACCATCTGCACATACCTCCAACCTCTTCACATCAG
CTATATTCAAGTGTGCCATTCTCTTATGCCATGTAACAATATCTGTCCTACTTTTACATG
AAACAGCATAAGCACTGCCTTTAATAGTATTGAGTTTGTACATGTTATTAGTTAGTTGGG
CAGTTGCTATGAGGACCTTGTTGGTATTGTATATGTTACACCCCATATCAGTGAATTCTA
CTTTACAGCCATTTTTTGTCAACTGACTGACCGATAACAGGTTTGTACTTAGCTCAGGAA
TAAATAAAACATTTCTAATCTGGATAGGGCAGTTTTCCTTACATAGATTGGTTTGAATGT
TTACATTACCCATACTTTGCACGGAGACGAAATCACTGTTTGCCACCATTATTTTTGTAA
TCGGAGGTGGTTGTAAATCATACATCCATTCAGAACATCTTGTCATGTGCATGGTAGCAC
CTGAATCTATAAACCACTCGTCCTGATGTAGGGTGGTGTACGCTGAAAAAACTGCTGAAA
AACCGTTATGATTATTAGATTTCTTCACTGTACACTGATTTTTAAAATGTCCATATTTGT
CACAGTTATAACATCAGAGGCCTTTTCCTTTTGGT
(4175 bp)

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