SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13655_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_topoisomerase_I,_mitochondrial_[Bombyx_mori]
Ontology
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006265 P DNA topological change
GO:0006338 P chromatin remodeling
GO:0007059 P chromosome segregation
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0016853 F isomerase activity
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0045995 P regulation of embryonic development
GO:0048477 P oogenesis
Transcript
Level		FPKM:13.55 TPM:13.63
ORF EntryO_BomoSK15193_complete:A_BomoSK_comp13655_c0_seq1
Sequence
(Nucleotide)
CCTAATGTCACTTTTTATTTAGGATAATCTCATTTCACAATTTTATGACATGGTAAAAAT
TTTATATTTACAAGATGAACATATAACACACTACAGAATTGTACCTTTCATAATCTTATA
TAGCTATTGCTTTTTGTTTTATAAAAATAAAGTAACCATTACATTTTATTTTATTTTACA
TGATTCACCACTGCAGTGTTTTCTAACATCATTTGCTTTTCGATACAATATTCTTTTAAA
TTAGCCTTAGTTAAGTTTTCTTCACTATTCACAATACCGAATAGTATTTTCACAAGCACA
TTCAACATTATTATTTATGCATTTGAACTTTAGTGAACTATGAGCCTCACTAATATTTAC
AATGTGTATTTACACATCACAATGACTTATTCACAACATTTTGTCATTCTTTATAAAAGT
GACTAGCAACTTGTAATTTAATTATAAGAATTATTTTCAGATAATACTATCATTATGGCT
AGCTAAATGTTATTTTGTAAATGAGAACAAATTTTTGACCAAGTTGCAAGTCTTACACAA
AATCTTAAAACTAGAATTCCTTGAACTATCATATTAGTCTAAATAACCTAAAAAGGGATC
GAGAACTAAGTCCAAACTAAATAAAATAATTAGAATCAGACTTCTAATTTAAAAAAGAAG
GAACAATGTTCGGATTTTTTAATACATAAACTTTACTTGAACCTTAAATACATCATCACA
TAGTAAACTTTGTAAAATGTAAGTTCATAAAACTGATTTTATACATCATTTTGTATAATT
GGGACGTTATATTCAACATATAAAAATAGAGCTGCTAATTATTCTAAAATTGAAACTAGA
AGACATAGTCTGGCCCGGCCATGTCTATTGCCCATCGGAACTTATCCCTTTGCGTTTTGT
TATATATTTTCTCAATTGGAACACCATGTTTCTTGCACCATGCTACTGAAATCCGTGGAT
CCAAATAATTCAGTTTCGATGTTCCAAGGGCAATGGTTTTATTTTCATCTCTGTCTGTTT
CCTGCAGTTCCAGTTTTTTAAGTTGGTCTTTGAGACGTTCAAGTGCCTTTTTCTTCTTAT
CACATGCTAATTTTTCTTTAACAGAACCTCGCTTTGCTGCTTTAGATGCTTGTTGAAGGT
CTTCTTCAGCCTCATCAATTTGATCCCGTTTAGCTTGAATTTTTTCTTTTAAAGCCTCCA
TGGACTTAGAATGTCCCTTAGGTACAGCACGTTGATGGTTGCACAAGATGGCAACTGCAC
GGTTTGCTCTATTGTAAGCTAAAATCTTCTCAGGCACAGAGGCATCACCATCAGTGAGCT
CATCTAATTGTTTCTGTAGGGTAATAGAAGCATTGTATGTACGGAATACCTTGGCAGTCA
AACCTGGCATCAAGTCTTTTAAATGTTCATTTAAAGTTTGTGTGTTAAGTCTGTCGAAGA
GATCATCACTGTCCTTTTTATTCTCAATAAATATTTCGAGATTCTTAAATACACGTTTCT
CTACTGGCACTTCATTGTAATATCTTATTGAATCTTTACCAAGGAAATCAAACACTACTA
CATATTCTTTACCGTCCTTTTCTTTGTGTAACTGGATATGTTCTACTCTTAATGAACAGC
AACCAACAGTGTCAGCTTGTTCATCATCTTTTTCATTACCTGCTCTAAGTGCTAATCGAT
CAATGAAGTATAGTGCCACTGCTCTTTGGCGCACCTGCATCTCCTTTGCCTTCCAATCAG
CACGGTAATTTTCTCTAATTTTGTCTATACACTTATGAAGTTTTCTAGCAGTCTCATATT
TCTGCCAATCTTTTTCACCCTTCAATTTTGAACTGGGATTTAACATGACATACTTAGCTT
GCTGCTGAACATTCTCTGTCCAAGAGGCTAACCATGTAACTGTATTATCATGTCTTACTT
CTCTCCATTTATGTCCTGAAGGTGGTTTTGGTATTTTACTATCTTTTGAGCAATTGATTA
AGACATCTTCAGGCATAACACGTCTCTTTAATTTCCCCATTTTTGGGTGCTCACCTCGAC
CTCTAAACAACCCTGGGGGTTCTATTCGGAAGTTCCCTATCTTCTCTTTATGACCATCTA
TTGTGCAAAATCCATATTCTTTTTGTATTTCTTCATTTTTGGCTTTTAAAGCAGCCTTTT
CTTCTTTAGATCGATTTCTATTTTTTTCAGATACACTCTGAAAGTATGCATGCATCTCTT
TGAAGTTACATTTGGACAAATCTTTAATAAGTTTAGCTTCTTCCGGAGTCATCACTTTCC
GCCAGTCAGTTAAAAAATTGGTGTTGAAAACAGACTTGGTGGTATAATCATGTTCCAACA
TGCGTGCATAAAATCCTGCTACTTCTTCAGCATCTTCAGATAGTTTCAACTCTTTACCAT
CATAATAAAATTTGACATTGGAAGGCAAAGGTTCATAAGGTGGAGCAAACACAGGGCCTT
TATGTTCCAAAAATGTCCATTTTGTTCCATCATCGGTCTTCTCTTCTTCCCACCATTTCC
AGACTTGTTCTGTTTCTGTGTCTTGTTTTTTCTTCCGTTTATTGGGACTGATACCATCAT
CTATGGGCTCAGATTTCACCTTAACTGATTTAGTTTTTTCAGAACTCTTCTTTTTCTTTT
TAGGTTTTTCATCTTCTTCATAATCATCATAATCTTCATAAGTCTCTTCTTTTTTTACTT
TTTTCTTAGATTTCTTTCTTTGTAGTAATGGAATGTCTTCTTCACCATCACTAACATGGC
GTTTTTTAGCTTTTCGTGCAGTTAGTGGTATATCCTCTTCACTTTCATCATCTGGAGGCA
GTTCAGAAAGTGGCTCATCTTTAAATTGGGACATAGAGTAGTCACAAGATGAGACAGTTG
TGTTAGCTCCAGCATATCCTTCATCACTATCATCTTGTTCACGTTTTAAGACTGGTTGAT
CCACCTCCATAGGTTCATCTTTTATGACATTCTGAGACTCAGATTTTATCTTTTCATTTC
TTTCACTTGAACTTTTCTCCTTGTTCTTGCTGGAGCTGTTTTTATCTTTTGAACTGGAGT
GCTTATCTTTGTCCCTATGGTGTTTATCCTTGTCACTCCTGTGTCGATCTTTATCTTTTT
CATCTTTACTTTTAGATTTATGATCTTTATCCTTTGATGAGCTTTTGTGTTCTTTATCTC
TGGATGATGATGATGATGATGTCTTTTTGCTATCTGAACTGCTTTTATTCTTGTCTTTTT
CATCACGCCTATCTTTGTCACTTTTTGATTTTTCTCTATGTTTGTCCTTGTCACTGCGGT
GTTTATCTTTGTCACTACGTTCTTTATCTCTGCTACTGTGATCTTTATCACTTCTGTCTC
TCTTTTCACTGTTGTGTTCTTTATCTTTGCTGGAAGATTTATGGGAGCTGCTGTGCTCTT
TACTGCTTGAGTGTTTGTCTTTGTCCTTGTCTCTGCTAGAGCTGCTGTGCTTGGACGAGC
CCTTGTGATCGCGATCTTTGTCGCGATGCTTGTCTTTGCTAGAAGATTTGTGGCTTGATT
TGTGTTTGTCAGAGCTACTGTAGCCGTTATGCATGCCGTTCACGTGTTCATTTTTATTTC
CATTTACCTTTCCAGATTCACAATCATTATCGCTGGCCGGGTTTTCGACACTCATTTTGC
CTACGTATCACAACGTTTGTTCGAATAAGATTACATGAGGCCGGCCGAAAACGAGCGCAA
AATCTAAGTGTCCAGAAGTGACGAATGCGCATGCGTCGTTGCTCATACGATAAAAGGGAA
CTTCACTCCGCTTGGTTCAATGTTCTGGTTTGTACGAACTTCAAGTTGACAGTTCAGCTT
TTTAAAAAACTGAAATGGCAATGGAATGTATGCCATCTAAGCCTTCATCTAAGATTCAAT
CTAAAGTATTTATACTTGGATACTTAGTCATTATACGAAATTCGTGTAACTTCCAGACGC
AGAATATGTGTAATAATAGTATAGTAGGTTCTGCGTATGTAGAGAAACTATAATTACGGT
ACCGTGGGTAATGCTCATTTTAAAATTACTACGTCTATTTGTACATGCTTAAATGTCAAT
AATTGCAGATCTGCATGCATGCTATCG
(4107 bp)

- SilkBase 1999-2023 -