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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13634_c0_seq1
Scaffold_idBomo_Scaf003
NCBI non-redundant
(nr)		Retrotransposable_element_Tf2_155_kDa_protein_type_1_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.01 TPM:3.03
ORF EntryO_BomoSK15057_complete:A_BomoSK_comp13634_c0_seq1
Sequence
(Nucleotide)
GAAAATTTTAACTATGACTTCTTAATTGGTTTGGATTGTATAAAAAAATTCAAATTAATA
CAAAATGAAGAACTTAACATCATACAATATCCCGAAAAGAAAAGCATAATCTCAAATGAA
CATTGTTTTAATGAGAATAATGTAACAAATGTCGGAATTCCTGATGTACTAGGTGACAAA
AATAAAGAACAAACATTTAAAGAGAGAATAGAAGAGAAAGAGAAGATAGAGATGGAACTA
TACTCTGAGATAGTAAAAAAGGGTACTACTATAAATACCAACAAATTGTGTGAAATTAAT
TTCAATGAACATGTAAACATTGATGAATTTCAAATGTCTGTAAATCATCTAGATTTATAT
CAGCAATCAAAAATTGAGAAGTTAGTAGATAAATACAAATCTGTTTTTGCTAAGGACAAA
TATGATGTTGGCTCTGTGCAGGATTATGAAGCCCATATAGACTTGATGGTAGATAAATAC
TGCTATAAGCGTCCGTACAGATGCACAATTGAAGACAGAACAGAAATTGAAAGTCAAATA
TCGAAGCTACTACAGAAAAATTTGATAGAGGAATCTTACAGCCCGTTTGCTGCTCCTGTA
ACTCTAGCATATAAGAAAGAAGATGATAAAAAAACAAGATTATGCATAGATTTCAGAGAT
TTAAACAAAATAGTAGTTCCACAATCACAACCTTTCCCACTTATAGAGGACTTAATGACC
AAAACAGTAAACTGTAAGTATTATTCTACATTAGACATAAACTCAGCATTTTGGTCGATC
CCATTGAAAATTCAAGATAGACATAAGACTGCTTTTGTGACACAAGAAGGACATTTTCAA
TGGACTTGTCTCCCATTTGGGTTAAAGACTGCACCAGCGATTTTCCAAAGAATATTGAGC
AATATTATAAGAAAACACAGACTATCTAACTTTGCAGTAAACTTTATTGACGACATCTTA
ATTTTTTCTAAAACTTTTGAGGAACATATACAACACATATCGAGACTACTGGAAGCAATA
CAAAAGGAAGGGTTTAGACTGAAGTTTTCAAAATGTACATTTGCAAGTCACCATGCTAAA
TACTTGGGTCATATAATAGAAGACAATTCAGTTAGACCTCTAAAAGATTATTTAACTGCT
GTCAAAAGCTTCCCAATTCCAGAAACAAGGAAAAATATACGGCAGTTTTTGGGAAAAGTA
AATTTTCATCATAAGTTTGTACCACATAGTTCAATTATCCTCGATCCATTACATAACTTA
TTAAGGAAAGATGTGAAATTTGTATGGACGGCAGAATGCCAGGAAGCATTTGATAAAATT
AGAGCATTGCTTTGCTCAGAACCAATCCTAAAAATATTTGACCCAGATTCACCGATAAGA
ATTTACACAGATGCTAGTATCAAAGGAGTTGGAGCAGTGTTGAAACAAGACGATGAAAAC
GGCGTGAGTAAACCGGTTGCTTATTTTTCGAAGAAATTAACAGAAGCACAGAAAAAGAAG
AAGGCAATATACTTAGAATGTCTGGCGATAAAAGAAGCAGTCAAATACTGGCAACATTGG
CTTATGGGAAAAGAATTTATGGTATACACAGATCATAAACCCCTGGAAAATATGAACATT
AAAGCTCGAACTGATAAGGAACTAGGTGATTTAACATATTATCTATCACAATATAATTTT
GAAATTAAATACAACCCAGGAAAATCAAATCAAGAAGCGGACTGCTTAAGCCGAAATCCA
GTCTTAGAAGCAAATGATAATAACGACGATTTTTTAAAGGTCGTAAATTTAATCGACCTA
CAAGAAATAAAGAATGACCAGCTAACAAATCCAGACCTACAAAAAGAAAAGAATAAGCAC
ATATTAGAGAATGAAGTTTATTACAAGAAAAATAAAAGAAGAAATAAGATTATACTGTCA
GAAAAACTTAGCAAAGCTCTAATAAAAAAAGTCCATGACACGTACTGCCACATTGGAAGA
ACCCAAATGACAAATAAAATAACACCATTCTTTTCAGCCAAAAATATTACAGCAAACATT
AATAAAATGTGTGATGCGTGTGAAACCTGCATTAAAAACAAGTCCAGGAGGAAGTCGAAA
TATGGTTTAATGTCACATTTGGGACCAGCCACACACCCGTTTGAAATTGTATCCATCGAT
ACTATTGGGGGCTTTGGAGGATCCCGATCAACCAAAAGGTATTTGCATCTTCTAGTGGAT
CATTTCACACGGTATGCCTATATTTGTACATCAAAAACTCAAGGCTCCAATGATTTCATT
AAGCTAATGCAAAAGGTAACAAAAAATTATGACGTTAATATGGTATTATCAGACCAATAC
CCTGGCATAAATTCAAAAGAATTTAAAGAATTTCTAAAGAATAATAATATCAAAATAGTT
TTCACAGCTGTTGATGCGCCTTTTTCGAATGGGCTTAACGAAAGATTAAATCAAACACTA
ACAAATAAGATAAGATGTAAAATAAACGAAAGCGATAAGAAGACATCTTGGACAACAATT
GCACAAGAATGCGTAGAAAAATATAATGAAACAGAACACACAGTTACAAAGTTTGCTCCC
AGGTACCTTCTAGAGGGTGAAAATGTGAGTATTCTACCACTACATTTGAAAACAAGTTGT
ACAACAGAAGATTTGAGAAGAGATAGAAAATTAGCCTTAGAAAACACAATAAAATCTCAC
AATTATAATAAAAATATATTTGACCAGTACAGAGAAGGGTATAAATTGGAAGAAGGAGAT
AGTGTTTATGTGGAGAATGGAAATAAACTAAACAGGAAAAAAATGGATGAATTGAGAACA
GGGCCATACAAAATACTAAAGAAGATTTCAGAATCGATCTATGAAGTTGACACCGGACAC
AAAAAAGCAGAATCAAACCTCTACCATATAACAAAGTTGTCTCCAGTGTCTATCTGATAT
GATAAACAATTGTAAAACCATTCACTGCCTCTTACAATTGTCTTTTCAGCGGGGGAGATG
TAATGAATGATTGAATGTCAA
(3021 bp)

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