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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13633_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_DNA_repair_protein_complementing_XP-G_cells_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009408 P response to heat
GO:0010213 P non-photoreactive DNA repair
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.72 TPM:0.72
ORF EntryO_BomoSK15039_complete:A_BomoSK_comp13633_c0_seq2
Sequence
(Nucleotide)
TTTAAATTTGATTTTTTTATTGAACAAAACAAACAAGATCCTTCCTATACATGCATTCTA
CATTATTCACTATCAGTTTCTGAGAGTTCTGCATCGTTTTTTGGTAATATAACTTTCTTT
TTAAAAGCTTTTTTCTTGCGATCGATTTTGGTCTTCCTGAATATTTCAATAGCCTTCAAT
TTATTCTGCAATAAGCTCTGTTTCTCTTTCTCTCTCTGTGGAATGATTTCTTGAACTCGG
TCCGTTTTAGGAATTTGTATTTCAATTTTTTTCGTTCTACCTTCACTGGTTTCTGAAATG
ACTTTTACCCCCTGACTAATGAGGAGCTTTTCTTCTAGATTTTTCTTCAACTTAGGCTGT
GTAGGGCCTGATTTATTTGATTCATTTTTTATTTTCTTTCTTTTCTTAGCAATTGTTGCC
TGAACTTGTGTACTCGGAATAAGGTCTTCAAGTGTATTTAATATATTCGGTCCCATTTTC
TGTACCGCTGCTTTCACCCTTTTGCTCATTTGATCCTCCAAAGATTGCAAGTTGACATTT
TTCTTGAAATAATCTTCAACTGACCTCTGCAGTTTCTTCTCTTGCATTCTTTTTAAAACT
GGTTTAATTATTTCGTCGAGTTTATTTTGTGACCAACCAAATTTCTCTTTTGTATAATCT
CGAAGTATTGTGATGTCTAATTCACCCCATGTAAATTTTTCATTACTTTTTTCAACATTC
GGTTCTAAGTATGCTTGTACAACGCGAACACTGGGAAAATCTTCGGACAAATTCACATTC
TTCAGTTTTTTCTTTAAGCTAATATTATCTGTTCTTCTCCCGGCACGCACCCACACCTTA
AATTCTTGTAAGCCAGCCACCATTTCGGCATATCGCGATTTCTTAACGCTTTCATTCGAT
TGCTTTTTGTTGAAAGGAAAAGACGCTAAGATTTCTAGTGCGGTGACTGGACCTACTCCA
GACACCCCGGTAGTGTAGTCACTGCCCACTAACAGAGCTAGTAAAACAAGCTGCTCACGA
CTTAAGTTATATGATTTTTCTATTCTGTCAGCTAAAAACTGTAGAACATGTTTCTTTTGA
TTAAAGAAATTTTTGTACACAGTTCTACCCCCAAATAGCCAAATATCACTATCATCTGTG
ATTGTTCCGTCAGTTAGATTAATGGTCTCAAGGAAGGCACACTGTGCCTCTGCTTCCATT
GGTGCGACGATATAAGGAATTCCGAATATTTGCAGTAACTCCTGAGCTTCTTTAGTCATC
TGTTCTGTTATGTTTCTACCAACACGATCTAATCGACCTTTCTCTTGTATTAGAGAATTT
TCTTTTGACTGAATCTCACCTACGATTGTATTCAACTTTTCAGTTGATATCGGCTCTTTG
ACTACAGTTCTCTCTTGTAAAAGTTTCAGATTTTTGTCCGAATTAGTAGCTTTTTCGTCA
TTTTCGTGCTGAATAATACAATTTACTGTTTCATTTTGTAAATTAGTCTCTACTACTTCT
GTGCTCTCTTTTCTAAACTCGTTTTTGGTCGTGTCATCGGTTACAACTTTTAATTGATCG
CGTATATCACTTTTTAGTTCATTGCGCCCTTTTTGTTCCACTTTTTCAGTTTCCACATGA
ACATCTACAGCCTCTGTATTCTCAAAGATATCTGCAAACAGATCATTCTTATCTGGTATA
GTATTGGTATTTAATATTAGTTGCACAACAGTTTTGGGATTAGAATTTATTTCCGGCACG
TCCTCAAAATCGTCTTCATCCGATTCAGAATCCTTGGATATTTCAGGATTGCGTTTATCA
GTGTTTTCTACATCAAAAGATAAAATATCCTCATCAGAACTGTGAATACAAATTACTGAG
GATTGCGAAGAATCAATAGCTTTTATTGGCATTTCTTTTCTTTCAATAATATCGATATTT
TGTTCTTTATCACTTACATTCAGAACTGTAAGCTGACCAATTTCTTTGCTATCCTCAACA
ACACCATCAGCAGCCTCTACTTTATGATTTTGTTTTAATTCTACACTGAATGCTTCTACT
GCAGGCTCTTTGTCTTTTTGCACAGGAACAGTTTCAGCACAATCTGAAGTAAGGTCAATA
TCTTGAACTTTATTGTCTTCTTCAGATGATATTTCTAATTTACTTTCAATTAATGCTTTC
TCTCTATTTATTTCTTCTAATATTTCATCTAATTTGGAAGCATGAGCTTTATTTTTATTA
TTACTTTTTTCTGAAACAAGTTTTTCAATAGCAATATTAGTGAAATCACTATACTGCATG
ATATAAGCTTTTGCTGTTGACATATCTGGTACTTCATATTCATCTTCAGAGTCTGAATAA
TCTGTATCAGTTAAACAGGATGTCCAAGAATCATCAGTCTTCGAATTATAAGTAGCTGTG
TCAGTTTCACTTACACATTCCATAGACATTTTAATGGCCATCTCTAAATCACATTCAAGT
TCATCTTTAACTGGTGACTTTTCTTTTTCAATATTTATTTCTTCTACCCTATTACTCGTG
CTTGCTTGATCTTTGGCGTCGTTTCTTTGCTTAGCTTCAGCTAAAGCTTGCTTTATGTTA
TTTATAAGTAAGAATCTTGTATTATCATTGGACGCTATTCTTTTTGTCGGTAATGTATCA
ACATTAGTATCAATACCTTCCTCGTTAAGTAGTGATTCTAAATCTTTTAATGACATTCCT
GTAACACCCATTTCTTTCTCAGTTTCTTCAAAACATTCCTGTAGTTTCCTTCGTTTTAAC
AATCTTTGCATCTGGAAATCAGAAAAACTGTCACTTTTCTTTGGTAATTCATGTAATCTT
CCCCAAGAATTCATTTTTCTTGTTTCTTTTAACTCTACAAGTAGATCATACTTCTCTTTA
AGAGGCATGTTTTTGAAATGTTCAGAGTTTAGATCCATTGAATGTAGATCAACAGAGGAG
CCACTTGAACTTTCTTCCTCAGAACTACAATGTAAATTTTAATCATATAAGTATTATTAG
TACTTAAAATTGAAACCTGAAAACATCTGATTCACTCTCCTGGTTCTTCTTCGGGAGTTC
TGGCAATTTGAATATATTATCTTCATTTTCAGTTTGAGCTACATTCTTTTTTGGTGAAAT
CTGCTTTCCAAGCAAACTGTTGATAGCAGTTTTTTTGCTTAAAAGAAGAGCTAATTCTCT
CTTTATTCTTTCAGATTCTGAATTATATTTCGCCTTGTGATCTTGTCTTTTAGAAATTGT
TTCTTTCTTCAAGTCTGGAAAGCCACCATCAAAGACGAAAATTGGTTTTATCCTGAAGTA
GAGAAGTTTGCAAAGCCGTTGGAACAAGCCCATCAAGTGAGCATTTGCTAAAGGGGCTCC
TTTGGCATCTTGGTAACCTTTCACCATCTGGTGCAACCATATTGAGATGTCAACAGCTAA
AACCTTATTTTCCAACGTTTCTACTGGAACTGGCTTTCCTGTCGGTTCAATCAACCGCCA
CAATCCAGTGACTCCCATCGTTACCGATAAGAGTAGCTCCGACCGAACTTTTTTTGTTTA
CACTAATGTATATAAATATAAATCAGAGTACATAACAAAGGTCGTTTCCCACGGGTTCTT
CGGTCAATCGTCGCTCTCTTCCTCACACATTGTAACTTTTCAACATATGAATCACTGTTT
ACTACACACACTATCAAATGAAACTATAATTTGAGTTAGTGGAGACTGGGTGTTTTACTA
GTTACTACACACGCTGCGACCGCCGACCGCCTACTCTTTCCCACACATTATTTTCTCACG
CCCCACGCGGCGTAACCCCACATCCTACTACGACCGTCGGCGGCTTTCAGTCAGCTTCGT
CAGTCGGTCTGCTTCGCATTCGAGGATTTCATTGTTGTTTCGCACGCGTAGATGTAAATT
ATTGGAAAGCAAATTGCTTGCACTTCAGATTGCTTAAACGGTGTCTATGTCAATCTATCT
ATGGTCAGATTTGACAGATTGGTATTTGGCGTTGTCGGACGTAAACTTGAGAAATAAACA
GAAGTTTGATAAAATCGTACATTTATCAAGAAAGCGGAACAAACGAAAATTTAAGCAAAT
ACAAAAGTTCGCTAACAGTTTATCAAATTCTTTTCCTAAACTTGGAACCGGTAAATTTAG
TGACTCGTCTGAAAATTCCAATGTTGAACAGGTGTTTTTGAATGAAACGTGTGCTAGTTC
CCACCGTAATTAATTTTTAGTGGCGTGAATAATATAACAGAAAAAGGGATCGAGCGACTT
CCCAATCGATTTACAAAAGTGCCTCTAATCAAGCATCCAGTGCGACTGCTGTAGTGTGCT
ACAGATCCTCTGTTATGGAGATGTAATCATGGTGCCTTGGAGAAGAGATCACTCCACATA
GTTTTTCGAACAATGCCGTTGAAGATATGAGGGTAGGCTGATGGTGATTTAGCCGTG
(4437 bp)

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