SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13631_c0_seq3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_serine/threonine-protein_kinase_PRP4_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005694 C chromosome
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0008380 P RNA splicing
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.21 TPM:1.21
ORF EntryO_BomoSK15029_complete:A_BomoSK_comp13631_c0_seq3
Sequence
(Nucleotide)
ATTTTGTTTTATTAGACATTAATTAATCTGAGAAATTGAATAGTGATCCATATTTAAATT
TGTCTACTTTGTTAAAACATCTTGAACAAATGGATGCTTCAAACAATCTGCTACTGAATA
TCGTTGACTAGAGTCCAGTGTTAGCATTTTGTCTAACAAATCCTTTAGCTGTGTCATTTT
CCTTTCTTCCTTGTCTGTCATATTTTTACAACAATTTCGCAATTCGTTATTCAAATCTCT
ATTTGCATTGATATTTGTCACCTCAACTAATTTATCTCTACCAGTAAATTCGTCCTTTTT
GTGGAGTAAAAAATTATAATTATAATTAAAATGTTGATCTTTAAATTTGCCTTTTCTAAT
TAATTTGTTTGGTATTTTGCCTTTTAAGTCCATAAAACATTTGAGCATTTTGTTGTTGGA
GCTTCCAGTGAAGAGGATTTTTCCTGTCGTCATTTCATAAATTGTACAAGCCGAAGACCA
TAAATCAACACCATGTTTGTAAGGAATCCCTAAAATTATTTCTGGAGCTCTATAATACCT
TGACACCAAGTATGGTGTTGGTTCATTTTCATCAATTTTTGCAGCAGAACCAAAATCGCA
CAACTTTAGGATATTCTTCCTTTCATTCACTAAAATATTATCAGGCTTTATATCTGCATG
CACAATCCCAACTTTCTTCAGTAATCTCAATGCCAAGAGTAATTGCCTGCTGTAACTAAT
AATGGCTTTCATGTTTAAACCATGATTTTTACCATATTTTTTAAGTACACATCGCAAATC
AATATGTAAGGATTCTAAAACTAAACAGAGATGTCCTTTGTGCATGAAGTGCCCTAAAAA
TTGCACACAATGATATTTATTTTCTGGATCCGCCTCATTGACTTCTTTTAATATAGAAAT
CTCTTTTAAGCCAGTTTTGTACATCAACTCATTGTTTCTAATTATTTTTATTGCTACATA
GTTGTTTCCTTGACCATTATCTTGAGCACGCACTACATTGGCAAACACACCTTGTCCTAA
TGTATCTTTTATTGTGAATCTGTTGTTGACAACATCACCAACTCTTATTTTATAGTATCC
TTCGTGGTCATCCCAATTATCAGTCAGAGTTGAATTATTTGTAAAATCATTTTTGTCCAC
TTTAAGAAGATCTTTAATTTTAAAATCATCTTTCTCAGAAAACATATCTGTGAAATCATC
AGTCTCTCCAGCAGAAGTTGGGTTTACATCAGTGAGCTTTTGATCATTACCCCCATTATT
CTTTTCTATAATACTCTCAGTATTTTTTGAATGGTTATCATCATGTGATTGATTAAATTT
TTTTAACAATTGTTTCCTTTGTATCCTTCTTTTTTCAATTATACTTTCTTCGTCTTCAGA
CTCTGATGCAATTTCTATATTTGATTTTGATGGAGCACTTTTTGATTGTTGACCATGACT
ATTTTTGCTTTTATCTTCACTATATCTTTTTTGTTTACCATCTTTTCCCTCTGTGTATTT
TCGTTTCCTATTTTCCTCAGTATGTTGATTACCACCATTTCTAGAAATGTGCTTAAACTT
TTGCAGCTGCTTCTTTAGAGAATCTCTTTTTAGCAAAAGTTCTTCAGTACTAGTCCCACT
TCTGTGAGGTAATGGTGGAGTTTGAGATCTTATTCGAGATTTTTGTTTTCTTCTTTTTGC
TTTCTGTTCATCATAATAAAAATATTTGGAAGAATTTCTTTTAGGCTTCTTATCAGCCAT
AGTAACAATATTGTAGGAAAATATTAACCAGGAATGCTTATATTTCCACCCAGTGCCAAC
AAATTTTATTGGAATCCAACATTCCAAGATAAGTTCTTCACACTCATCCATCATTCCCAT
TTGTACAGATCATTTAACATCACCATCCATGGTTTTTGTGTGCAATGGGTTTTGATTGCT
ACATGCTAGAAAAAATATTACAAATTAGAGAATACATGTAACAAAAGTTCACAATACCCA
TGTACCATTACATATGTTTTAAAAAGAAATATGAATTTATGTTTTAATTATTATAGAATT
TTCCCAGTCGTAGTGCTTTTTTGGTTAAAATAGTACACATAACATGATGGCACGAAATTA
AATTTTCTTTTAGAACAAGTAAGTCTGTTTTATGTAAAAACTAATTTTGTATAGCTTTAA
GGATACAAGTGATGTAGAATCCTAAGTCAATGAATCATCATGTTATGAGCACCAATTCAA
TATATTCCATAATAAAGTGTAATGGAAAAAACAATTAAATAATATAAATGTTTTTAGCAT
TACACGAAACCAATTTTATAGCAAATGCATAGTGTAGCTTGTTTGAAATTCATACTGCAC
TAGACACAATTTTCAAATCGTCAGGGACTTCACATCACTACAATAATAACATAATATTGA
ACGAAACTATGTAAGTTTATGTTTTATGCTGGAATGAATATTGAATAATTTGTAATTGCG
TCACCTATATTTTTTAAAAAATAACTTTTTTGACAAAAATTTAGCCCATGATACGTAGAT
AGGCA
(2525 bp)

- SilkBase 1999-2023 -