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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13629_c0_seq3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101742598_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.88 TPM:1.89
ORF EntryO_BomoSK15027_5prime_partial:A_BomoSK_comp13629_c0_seq3
Sequence
(Nucleotide)
AACGGAAACGTGCAACGAGTGCAATGCAAAATTTTTCAACAAATACGATTTGTCCGTACA
TCAGCTTCGGCATTCGAATGAAATGTCGTTTGAATGCATTGCGTGCGATAAAAAGTTCAA
ACGACAAATTCTATTAAAAAGACATGAAAAGTTGGTACACCCAGATTTACCTCAGCAGTC
ATGTCCTAGTTGTCCAGCCAGTTTCTTATCGATAGAGGAATTGGAGACGCATCAGCGAAA
ACATGCCCACGCTCAAGCCCGACCATTTTTATGCACAATATGTGATAAAAGGTTCCCAGA
GAAATCTACTCTACAACGCCACATAGACGCGGTTCATAATGCAAAGCAAACATTCAGCTG
CGAATATTGTCCACAGCGTTATTCGTCAATAACTAAATTGACGAGGCACGTACGGACCCA
TGCCGGTCAGAGGTCGTATCCTTGCAAATTCTGCAACAAGAGCTTTGTAAAATCGCACCA
TTATACTAGACACCTGCGCGCGAAGCACGCGTCGCAGAGCGCGAGCCGCGCCGAGCCCGA
GGAGCAGTTCCGCTGCGAGCAGTGCGACGACGCGTTCTCGACGCAGGACGACCTCATCTA
CCACTCCGCCATACACGCCACGCAGAACCTCATCTGTCCGCTCTGCCAGGAGAAGTTCGA
CGACGTCGACGCCGTCACTGCGCACATCAAGTCGCACGTCAACGGATTAGAATTCATGTG
TGACTATTGTGAATTAATATTCACCGAAAGAGAAAAACTTGATAACCACGTGGCAACGGT
GCACGATGAAGAAATCATTAGTGAGGTTGGGCAGGACGATTCTTCAATTGAAATGGATGC
AGAAGATGCAGAAGAAGAAGAAGACGATGACAACCCTATAAATTTGACCGAGGAGAACGG
TGAAATGGTCGTGGAAATTAAGAAAGCTGAGAATTTTATGCTTGATACCTACAAAGGTGA
GGCCGATCCGGGAGTCACAGTGGACAACACAGAACACAATTCTGAAGATTCAGAAATAGA
GATGACTTTCACAGACATGTCCAGAGTGGATCCTGTAACTGGTCCTATTAAAGATGAATT
GTCTGAGAAGCAACCCAGCCCGCCTTCCGCGGAGCCAGTCACACTGAAGCTAAACGAGCA
ATCTACTGAAAAATGTGAAAGCCAAACGGCGAGCATACTTCGCAAGGCGGAAGAAGTGAA
GAGAAAAACACAGTCAAAGATAGACGCTCCTCAAGAAAAAAAGGATAAACCAAATAACAA
TAACAAAGTGGAAAGCAGTACGCCCGTAGGCGCCAGTGACAAATCACTACGATTGCTGGA
AAAGGAATTACAAGATCTTAAACGGACAAACACGAGATCAGAACCATTTAAAACATCAAC
GAAATCCTTAGAATCTTTAAGGAGTAGACGACCGCAAATTCACACTTCAACTCCAAAAAC
GAGACCGGTCGATGAAAAGAAGCCTCAATTGGTGCAATCTAAATTGACTCTGATCAATAA
GAAAATCCAAGAGAAACGAGCTTTGACAAAAGAAAACAAAGAACCAAAGGAAGCCAAGGA
TACAAAAAATAACTCGAATGCTAAAGACGAGAAGGAAGTAAAAGAAGTGATTAAAGATAA
GACTGGATCTAAAAATGGCACAAGTGAAAAACGTGAGGACGGACCCGTCCGACGATCAGC
TCGACCCTCTAAAATCAGAGACTACGCTAAAATGATCCGAGACAATTCTCAAAATTCAGA
CTTTTCTAATGAAGAATCTGACAACGATGATTCCGATGATAACGAGTTCAAGGAAACTGA
GATACCTCCCGAGACCCGTATGAAGCAACGAAGAGCCAGTGTCAAACCAGTGGTAGTCGC
AAAACAAGCTCAAACCTCTTCTGAACCGACACCCACGCCGCCCAGGAAAAGGGGAAGACC
ACGTAAAGACTCAAAATTGCCCCCTAAAATCAAGAAGGAAGATAAAGCAGAAACCAAAAT
TGAACAAGTAAATTTGGAAAAATCTCAAAAAGATAGTGATAGCAGCAAACTTGATAAAGT
AACATCAGAAAAAGAGGATGGAAGCAAATCTGACCTAACGGACAGTGAATCAGGCAAGCC
GAACTCTGATCAAAACGCACCGGGTGGAGTTTTGGTCTCTCCTACGACAGGACAAACACT
AAAGAAGGTACCAATCAAGGCACTTCCGCCAGGAGTAAAACCATTACCTCTACTGGCAAA
CACGAGATTGGGTAGCGGCGAAGTCTGTGAAATGCAAATAGGAAAGAAGTTAGTCAAAGT
ACAAAAGATAGTTATGACCAAAGCAGAAGTGGAAGCCATGGCCAAGAAGGGGCTCGTCGA
AATGAAGGACGGCACGATGGTTTTGAAGCAAGGAATAAAAATACCAACTGCAGATAACAA
TACGTTAAAATCTACATCAATCGGAGAAGGTTACGAGGCGAGCAAAGAATCTCCTAAAAA
AGAAAGGGGTGCACCCACGAGATGTGACATAGGCGACGATTCCTTGAAATAATTTAAAAA
CATCGCCTGATTTAAATGAAATTTAGAATATTTTTACTAAATATCTATTCAAACATTGTG
TAAAGAGACCGTTCTCGAAGCGAGTTAATCGCATAAAGATATTCATTTACTAAACCAAGC
TTAGATACTTTTTCATGAACTAGATTATGCTTTTCAATTTTAATTGTGAATAATGCAAAG
ACTTAGTACATACATATATAAATTTCGAATGTTTTTTACTATCATGTTTGGTATTCTATC
AAGATTGTCGCCTGTAATTTTTGTCGAGAGCCCGGTTCTGAATCACCCCGCGGTGCATCT
TAATTTTGGCACTTATAAAGTCATATTATCATGAATTGTTATTTACATGAAATCTTGATT
TACCAATACTTTTATTATTTGTTTCTATATAAAAAAAAATAGGATTTAATTAAAACATAG
GAACACACAAGATATCTTTTGCACGTAA
(2968 bp)

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