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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13626_c1_seq5
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X2_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:1.24 TPM:1.25
ORF EntryO_BomoSK14982_complete:A_BomoSK_comp13626_c1_seq5
Sequence
(Nucleotide)
CGGGCGGTCATCGAGGGATTTTTAGTTCTTGATAGCATTTCCTTGAGATCGTTGAAGACC
ATGAAAATTCAAATCAAAAGTGAATACTCGCTAATATAAGTGTCAACACTGTGAAGTTTT
CTCAGTTATTGTAATTAAAAACTTTCTTGAAGCTTGGACTTTTGTGTACACCTGTCGCGC
CATCGATTAGGACAAAGACCGCAGTCATGAGAAGTGAATAGGCTTGTCCTGCGATCACCC
AGCACAAGAGTACCAAGAGACGCGGACAAGAAAATGTGACCACCGACCAAACAACCAAAA
CGAAATGCAAGCTATATATTCATGAGTCTTGGCACAAGATTACATGATTGCAGCCTATTT
ATATGTACTTATAATATAAAACAAATCTAGTCGCATTAGCACTATTTAAAAAAAGCATTT
TAGAGTTTACGATAAAAGGAATAAGATCGAAGTACAAACAGATGAGATGTACAAAATCTG
GGGGCGCTAATGTTGATTTAATTAATAAATTGATTTGATTAGCAGTTCCCGGAAACCAAC
AAAATGTCTGCAAGTTTTGAACACACCGCTATGAAGAGCAGTTTCTCGCTGTCGTCACTG
AGGAGCGCGCCCGCGCCGCCCGGCGGACCCTGCGAACAACTCGAGCGGCCTTACCATAGC
CTCACTAAGAAGAGGAAGGAGCCGTGTAGAGAAGCCTGGCGCCGGAGTTGGGGCTCGACA
GCGAGTGGCGGCAGCGCCGGCGACGATCTATGGCCGCTACTGCAACGACACTACGACTAC
ATCATGGATAACCAGATCATCGACAGTTGCAAGGAAGCAAACGGCGAATTACTATCACAT
AATCCGTCAGCTTTGCTGTCTGGTCCGTGTCTACTGAACCCAACATCGGGGTTCAACAGA
CAGTGGTCGCTGAATCAGCTCGTATCCGAATTCGACGAGCTCTGCCAGTGGCTGACACAC
GTGCAGGAAGAAATATATTCTAGTCCCGAGAATTTGTCCAATTGGAAGCTTAGAGCGAAT
CGTATGGCAGAATTGGTGGCGGTCGAGCCGCGGCGTGCGAAGTTCGTTGAACAAGCGAAT
GCTATACTGGAGAGGATACCTGAAGCCAACGGAGAGGTGACCTGGCGTATTGAGCACTTG
AGGATCAAGTGGGAAGCCCTTCGTCTGCTGCTCAGTCCGGAACAACCGCATCTTGACGGC
GAGAATCCTGATACAGTTGACACCGCCCACGAGCTACGTTGCCTTCGTAGATGGTTGCAC
AGCATGGAAGGCCGCCTTCCACCACCCTCGCTTGCTGCAGCCCGCTCAGCCTCCCATCAC
GAGCTACTCAGGAAATTGAGAGAGCACCAGGTATTACAACGCGACGTGGAATGTCATGGA
CGTATAGTCAGCTCAGTGGTGCGGTTGTGCCGCGGCGGTGACGCAGCCCGCGCCCTAGAA
CGACGCTGGCATCTCCTGTACCTCCGAGCCATCGAGTGGCAGTGTCACCTAGAGGCCTGT
TTGACCAAGATTAACACTCAGGGTGGAACATCAATTGAAGCTGTAAGTGACAGTGATGAC
GAACCGGCTCTAAAACAACCGAGACTCAGCAGAAAAGGCTCTCCGCGGAGTCCAAGAATA
CCGAGAAGTCCACGTAGACAACGCACTCCGGTTAATGCTCGCTGCAGAGAAAACTCTACT
GACAGTCGACAGTCAGCATCAGAGGAGGAACAAGAATATGTACTGACGTATACGTGGAGG
GGATTCGGATCTGACTGCGAATCGGAACTGATGAGGGAACAAAGCAACATGGCAGACGAG
AGGAGAGTACCCGGCTCGTTTGAGGACATGGACGTAAGAACCACTGACCAGACTGTACCT
GTCACTGTTGACCAACTTGACGGCCTCGATATAAACAGCTCAGTTATTATAGAGGAGAAA
CTCAAAACGCCACCGACAGTGATTAAACGTAAGAAACCAATAGACACGTCGAAATTCAAT
CAGACCGATCGAAAATCCAAACATCTAGCAATCTTCTACTTCAAACACCACGATACGGAT
TCAGACAGACAAGTTATTGAAACGGACGAAAAAAGCCAAGAGGAATCTTCCGAAGAAGAG
TGGACGTACGTTGGCGGTGCTAAAATAGCCAACGAAGACTCAACTGATCTGATGACGTCA
TCTGTGGAAATACAATGTGAGCTACCAGTTGACAATCAGAAAGACACACCGGCATCCCCG
AAACTGAAACTAGAATCATCGACGCCTGATTTACTGCGAGTCGAAAATACTAGATGTAAA
GACATAGAGAGATTAGTGAACCAGGCTGAAGAAATGGTGCATAAAAAGGCTATGGCAAAG
AAGAAGGGAATTAGGAACTTCAAGCCATTGAGCTTGGAAACTGACGGAAAAAATGTTAGC
AGGAACAAAATGTCCAGGATCAAGGAATGGCTGAATCAAAGTCCGGATGGAAAGAACGAA
AACAATCAGAACACGGAAAGCTATGATGCGTCTGGCGAATACACGACGGAAAGCGAAGTG
GACACATCACTTACATCTGAAGAACGGAACCTACACTCCTCCATGGATATGAGCACCTCC
ACTTGTACAGTAACGCCGACACATCATGCCAAGGTTACATTAAGAAAGAAACGCGCCGGT
AACAGCACTAGGCCTTGGTCCGTATCGTGTTTGTCTCAACTGAGCGGTGCGGGCGCATCC
CTAGCCGCCACGCCGACAGCGGCGGACGCGCCGAACATGACACACAACATGTCCATATCG
GAATCTGCGCTAAACACGCTAGCCTCCCCGCATACAGTCACGCCTTCGAACTCTAACTCG
AAATTAAGGGGCAGCTCTACAACTGTACAGGGTCACGTATCAAGCACGAACACAATGACG
GAAGCCTGCACGTCGTGCGTCGAAGCCAACGACAAACAGTGCTGGTTACGGCGCAAGCGT
TTCAAGCTCCGCCGCCACAACGCACCGCAAAATTCCAGGAGGGAGAGGCTGGTCAAGTCT
CTGTCGTTCTGCGGAAGGCTCAGCCCTGAAATAGAAGATAAAAATGAGAGGAGCGCCGCG
AGTGACCCGGCTACAAGAAAGAGCAGGTTCGACACGACCTCAACCTCGGGCAACGACAGC
GACGAGGAACTGATAAAGCAACAGTTGGCAGCGATGGCGAACCTACGCAAGAGCATCGAG
AAGACCCACATATCGACACGCGAAGACGGTGCCATCCCGGAGCAGAACGAACAAAACGAT
CCAGAAAACACGTCCAAACCCGAATTCAAACTCGGGCCGGCCGGCGGAACGGTTCGACCG
AGGTTAGCGAGGAGCTTGGAAAGGGAACGGAACTTCTTGGCGCTAAGCCTCGGCGATCCG
AACCAGCTCTGGGATCTGAGTTTGGACAAAGATTCGGACGTGGACAAAAGCGTGACGGCT
GGCACAGAAGAGCACAGCTCGTTCTCGGAACAAGCCTGGGACTTTTATCAAGAAAAATAC
AACTCTGAACCTTACTCCGAAGCCCCAGATTCTGACGCCGCACGTCGGTTGCTCGAGTTC
GGTGACGACTACCGAGCTTTCTTGGATTCACAGTCGGACTGCTGCTCTAGCTTGTCCGCA
CAACCAGAACACGATCAGAGCCCCAGTGGTACTCGAAGAAGGCGACCTCCCTCCGAAATG
TCCAGGGAGAGAAGCTTACCGCGTCACAAGCGTCCCACGAGAACCTCCCCGGTCGAAACG
CCTTCTAGAAAGCCCAAAAAGTCGATGTCCAGCGCTGAACGCAAAAAAACATTACTCGAC
AGCCTAGAGAGATCGAGGAACAACACTAGTCTAGAGAGCAACGACGGAGTCCGGCGCCGG
AAGCCATCGGACATGGAACGGAAGAAACACTCACCAGAATTCGACTTGCTCAACGTGCAG
GCTCTCGGCCGCCGACGTCACAGCTCCAACATGACCAGCGACGAGGTGAACAGCTCGCTC
GAGTACACCGAAGTGAATAACAGACCGGACATTCTGGACTCGCTGAACCGACGTCGCAGG
ACCGAGAAAGACGGGGAGGCGGAGTTGCAAAAGGTCGCGCTTTCTGAACTGAGGCGGCGA
TCCACAGAGAGCATTGATTCTGAGGACGAGACGTCGAGTCCCAAGAAGCACAGCCGAAGG
ACGTGGACGGACGAATCGGAGTCGGAGGCGGAGGAAGTGAGGTCCCTGGTGCGGCGCTCG
AGCTCGGCGCTGGACGCCGCCGAGGCGCTGCTGGAGCGGCACGAGGCCTCGCCCGACCTG
CTGCGCGCCTTCGACTACACGGAGGTCGTGACTCGTTGTCGCGAAAATATCAACTTACTG
GAAGCGAGTTTGGCTGGTGGTTCCCTTTCTGCGACATTGCAGCGCGATGTTAGAGCGGTG
TCGGCTCGTTGGTCGGCTCTGCGTGCAGCCGCCACTCGTCGTGGTGGAGCCCGGCGACTC
CGCAGGGAAATGGCAGCGCTTCGGGAAACGCTCGACGATATCTGTGACCCTGCAGACTGC
GCTCCCCAACCGCACACAAGAGCTCAACTACACAGGAGAATCGAAGAGTTAAAGGATCGC
CTATCGCGTCTTTTAGAATGCAAAGTTTCAATGTTGAAATTGACGGTCTCTGTACGTCGG
ACTCTCGGCGAGATGGAGTCAGATGATAGCGGTCTCGCTACTGAATTGGCAGCGTTATTA
TCCGCATGGGATGATGCGCATCAACGGACTTCTAATGAACTTCTCTCCTTGGAAAAAGCA
ATATGTGCTTGGGCCGAATGGGAGGGTGCGCTCCGCGAACTTCAAGGGGAATTGAGGGGA
GATCTAGCTACTTTGGAGGCATTGCGTGATCGTGGCACAATCGTTGGTGACCAAACCGAA
GTCGCCACTCAGATCAAACAATTGGCCGCATCTCTTATAGAGAAAAAGAAGGGTAGTTCA
ACATGCGACTCCCTCTCGGACTCTGGTATATCTGACGGAGATAGTGAAGGTGTTGGCAGA
CGGGCGAGACGTCTGGGTGCTCTGAGAGAGCTGGCGCGTCGTTTGCAAGCGACTTTAGCT
CCGAATTCCCCAGCACACAGGGCTATTGCCAAGCGTATGGAACAAACCGAAAACGAAGTA
CGCACCTTACAAGCGTCTTGTAAAGCGCTGGTTGAACAAAACATACCGGAACTTAAAATT
GACGATGACATAGAAAATAATGTCGGCCCAGTAGCTGGCAGTAAAACTGGCTCGGGCGAT
CCCGACTACAGCCCTCGAGGTGGATGGGTGTGGCGTGTATTACGTTCATCTCTCCCCATC
CAACTGTGCCTTGTCGCTTTATTGTTAGCCGCTTGGTTGGTTGAACGTCCACGATGCTGC
GATGCTCTTAACTCCCTTGCCCAATCGTTAACTCCTCAACTAAGATACGTTCGAGGACCT
CCTCCAGTTTGAGAAGCACGATAAATAAAGTTGTGGTTAATTAAGCTAGAATTCTAGCAG
GATTTTATGGATATATAGACACGGCAAAGGGTTATAGGCACATCCCAGTAGCACAATTTG
TGTGATGCACTTTTGTATTTGCCATCGAGTGTGTTCCGAGTTTTAGCTACGTAAATGACG
AATGGTATTTAGACAATATCTAATTCAATTTAAGAGAAAAGTAGATTTTCTTATGGATGT
ATGAGACTATATCTAGATGGTTTTTGATGACTTAATGAAATGCCTGTTTTATATCTTTAT
TTAATAATTGAAAGTTTAAATAGAGAAAGGACAGTAAATAGGTTTGATTGACATTTACTA
ACATATAGTTATGGATGTACCTTAAGGTATAAACGTAGTAGAAGAATAATGAGTGATAGT
AGAACGAAAGACTAAGCGGGTCGCTATCACGACGAACTCGCCGACATTAGCTTAAGAGAA
CCGTAAAATTCAAATTGTTGCTCACAGCAAAAAAAGTTCAAATAAATAAAAAT
(5933 bp)

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