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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13626_c1_seq2
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:0.39 TPM:0.39
ORF EntryO_BomoSK14966_complete:A_BomoSK_comp13626_c1_seq2
Sequence
(Nucleotide)
CGGGCGGTCATCGAGGGATTTTTAGTTCTTGATAGCATTTCCTTGAGATCGTTGAAGACC
ATGAAAATTCAAATCAAAAGTGAATACTCGCTAATATAAGTGTCAACACTGTGAAGTTTT
CTCAGTTATTGTAATTAAAAACTTTCTTGAAGCTTGGACTTTTGTGTACACCTGTCGCGC
CATCGATTAGGACAAAGACCGCAGTCATGAGAAGTGAATAGGCTTGTCCTGCGATCACCC
AGCACAAGAGTACCAAGAGACGCGGACAAGAAAATGTGACCACCGACCAAACAACCAAAA
CGAAATGCAAGCTATATATTCATGAGTCTTGGCACAAGATTACATGATTGCAGCCTATTT
ATATGTACTTATAATATAAAACAAATCTAGTCGCATTAGCACTATTTAAAAAAAGCATTT
TAGAGTTTACGATAAAAGGAATAAGATCGAAGTACAAACAGATGAGATGTACAAAATCTG
GGGGCGCTAATGTTGATTTAATTAATAAATTGATTTGATTAGCAGTTCCCGGAAACCAAC
AAAATGTCTGCAAGTTTTGAACACACCGCTATGAAGAGCAGTTTCTCGCTGTCGTCACTG
AGGAGCGCGCCCGCGCCGCCCGGCGGACCCTGCGAACAACTCGAGCGGCCTTACCATAGC
CTCACTAAGAAGAGGAAGGAGCCGTGTAGAGAAGCCTGGCGCCGGAGTTGGGGCTCGACA
GCGAGTGGCGGCAGCGCCGGCGACGATCTATGGCCGCTACTGCAACGACACTACGACTAC
ATCATGGATAACCAGATCATCGACAGTTGCAAGGAAGCAAACGGCGAATTACTATCACAT
AATCCGTCAGCTTTGCTGTCTGGTCCGTGTCTACTGAACCCAACATCGGGGTTCAACAGA
CAGTGGTCGCTGAATCAGCTCGTATCCGAATTCGACGAGCTCTGCCAGTGGCTGACACAC
GTGCAGGAAGAAATATATTCTAGTCCCGAGAATTTGTCCAATTGGAAGCTTAGAGCGAAT
CGTATGGCAGAATTGGTGGCGGTCGAGCCGCGGCGTGCGAAGTTCGTTGAACAAGCGAAT
GCTATACTGGAGAGGATACCTGAAGCCAACGGAGAGGTGACCTGGCGTATTGAGCACTTG
AGGATCAAGTGGGAAGCCCTTCGTCTGCTGCTCAGTCCGGAACAACCGCATCTTGACGGC
GAGAATCCTGATACAGTTGACACCGCCCACGAGCTACGTTGCCTTCGTAGATGGTTGCAC
AGCATGGAAGGCCGCCTTCCACCACCCTCGCTTGCTGCAGCCCGCTCAGCCTCCCATCAC
GAGCTACTCAGGAAATTGAGAGAGCACCAGGTATTACAACGCGACGTGGAATGTCATGGA
CGTATAGTCAGCTCAGTGGTGCGGTTGTGCCGCGGCGGTGACGCAGCCCGCGCCCTAGAA
CGACGCTGGCATCTCCTGTACCTCCGAGCCATCGAGTGGCAGTGTCACCTAGAGGCCTGT
TTGACCAAGATTAACACTCAGGGTGGAACATCAATTGAAGCTGTAAGTGACAGTGATGAC
GAACCGGCTCTAAAACAACCGAGACTCAGCAGAAAAGGCTCTCCGCGGAGTCCAAGAATA
CCGAGAAGTCCACGTAGACAACGCACTCCGGTTAATGCTCGCTGCAGAGAAAACTCTACT
GACAGTCGACAGTCAGCATCAGAGGAGGAACAAGAATATGTACTGACGTATACGTGGAGG
GGATTCGGATCTGACTGCGAATCGGAACTGATGAGGGAACAAAGCAACATGGCAGACGAG
AGGAGAGTACCCGGCTCGTTTGAGGACATGGACGTAAGAACCACTGACCAGACTGTACCT
GTCACTGTTGACCAACTTGACGGCCTCGATATAAACAGCTCAGTTATTATAGAGGAGAAA
CTCAAAACGCCACCGACAGTGATTAAACGTAAGAAACCAATAGACACGTCGAAATTCAAT
CAGACCGATCGAAAATCCAAACATCTAGCAATCTTCTACTTCAAACACCACGATACGGAT
TCAGACAGACAAGTTATTGAAACGGACGAAAAAAGCCAAGAGGAATCTTCCGAAGAAGAG
TGGACGTACGTTGGCGGTGCTAAAATAGCCAACGAAGACTCAACTGATCTGATGACGTCA
TCTGTGGAAATACAATGTGAGCTACCAGTTGACAATCAGAAAGACACACCGGCATCCCCG
AAACTGAAACTAGAATCATCGACGCCTGATTTACTGCGAGTCGAAAATACTAGATGTAAA
GACATAGAGAGATTAGTGAACCAGGCTGAAGAAATGGTGCATAAAAAGGCTATGGCAAAG
AAGAAGGGAATTAGGAACTTCAAGCCATTGAGCTTGGAAACTGACGGAAAAAATGTTAGC
AGGAACAAAATGTCCAGGATCAAGGAATGGCTGAATCAAAGTCCGGATGGAAAGAACGAA
AACAATCAGAACACGGAAAGCTATGATGCGTCTGGCGAATACACGACGGAAAGCGAAGTG
GACACATCACTTACATCTGAAGAACGGAACCTACACTCCTCCATGGATATGAGCACCTCC
ACTTGTACAGTAACGCCGACACATCATGCCAAGGGTCACGTATCAAGCACGAACACAATG
ACGGAAGCCTGCACGTCGTGCGTCGAAGCCAACGACAAACAGTGCTGGTTACGGCGCAAG
CGTTTCAAGCTCCGCCGCCACAACGCACCGCAAAATTCCAGGAGGGAGAGGCTGGTCAAG
TCTCTGTCGTTCTGCGGAAGGCTCAGCCCTGAAATAGAAGATAAAAATGAGAGGAGCGCC
GCGAGTGACCCGGCTACAAGAAAGAGCAGGTTCGACACGACCTCAACCTCGGGCAACGAC
AGCGACGAGGAACTGATAAAGCAACAGTTGGCAGCGATGGCGAACCTACGCAAGAGCATC
GAGAAGACCCACATATCGACACGCGAAGACGGTGCCATCCCGGAGCAGAACGAACAAAAC
GATCCAGAAAACACGTCCAAACCCGAATTCAAACTCGGGCCGGCCGGCGGAACGGTTCGA
CCGAGGTTAGCGAGGAGCTTGGAAAGGGAACGGAACTTCTTGGCGCTAAGCCTCGGCGAT
CCGAACCAGCTCTGGGATCTGAGTTTGGACAAAGATTCGGACGTGGACAAAAGCGTGACG
GCTGGCACAGAAGAGCACAGCTCGTTCTCGGAACAAGCCTGGGACTTTTATCAAGAAAAA
TACAACTCTGAACCTTACTCCGAAGCCCCAGATTCTGACGCCGCACGTCGGTTGCTCGAG
TTCGGTGACGACTACCGAGCTTTCTTGGATTCACAGTCGGACTGCTGCTCTAGCTTGTCC
GCACAACCAGAACACGATCAGAGCCCCAGTGGTACTCGAAGAAGGCGACCTCCCTCCGAA
ATGTCCAGGGAGAGAAGCTTACCGCGTCACAAGCGTCCCACGAGAACCTCCCCGGTCGAA
ACGCCTTCTAGAAAGCCCAAAAAGTCGATGTCCAGCGCTGAACGCAAAAAAACATTACTC
GACAGCCTAGAGAGATCGAGGAACAACACTAGTCTAGAGAGCAACGACGGAGTCCGGCGC
CGGAAGCCATCGGACATGGAACGGAAGAAACACTCACCAGAATTCGACTTGCTCAACGTG
CAGGCTCTCGGCCGCCGACGTCACAGCTCCAACATGACCAGCGACGAGGTGAACAGCTCG
CTCGAGTACACCGAAGTGAATAACAGACCGGACATTCTGGACTCGCTGAACCGACGTCGC
AGGACCGAGAAAGACGGGGAGGCGGAGTTGCAAAAGGTCGCGCTTTCTGAACTGAGGCGG
CGATCCACAGAGAGCATTGATTCTGAGGACGAGACGTCGAGTCCCAAGAAGCACAGCCGA
AGGACGTGGACGGACGAATCGGAGTCGGAGGCGGAGGAAGTGAGGTCCCTGGTGCGGCGC
TCGAGCTCGGCGCTGGACGCCGCCGAGGCGCTGCTGGAGCGGCACGAGGCCTCGCCCGAC
CTGCTGCGCGCCTTCGACTACACGGAGGTCGTGACTCGTTGTCGCGAAAATATCAACTTA
CTGGAAGCGAGTTTGGCTGGTGGTTCCCTTTCTGCGACATTGCAGCGCGATGTTAGAGCG
GTGTCGGCTCGTTGGTCGGCTCTGCGTGCAGCCGCCACTCGTCGTGGTGGAGCCCGGCGA
CTCCGCAGGGAAATGGCAGCGCTTCGGGAAACGCTCGACGATATCTGTGACCCTGCAGAC
TGCGCTCCCCAACCGCACACAAGAGCTCAACTACACAGGAGAATCGAAGAGTTAAAGGAT
CGCCTATCGCGTCTTTTAGAATGCAAAGTTTCAATGTTGAAATTGACGGTCTCTGTACGT
CGGACTCTCGGCGAGATGGAGTCAGATGATAGCGGTCTCGCTACTGAATTGGCAGCGTTA
TTATCCGCATGGGATGATGCGCATCAACGGACTTCTAATGAACTTCTCTCCTTGGAAAAA
GCAATATGTGCTTGGGCCGAATGGGAGGGTGCGCTCCGCGAACTTCAAGGGGAATTGAGG
GGAGATCTAGCTACTTTGGAGGCATTGCGTGATCGTGGCACAATCGTTGGTGACCAAACC
GAAGTCGCCACTCAGATCAAACAATTGGCCGCATCTCTTATAGAGAAAAAGAAGGGTAGT
TCAACATGCGACTCCCTCTCGGACTCTGGTATATCTGACGGAGATAGTGAAGGTGTTGGC
AGACGGGCGAGACGTCTGGGTGCTCTGAGAGAGCTGGCGCGTCGTTTGCAAGCGACTTTA
GCTCCGAATTCCCCAGCACACAGGGCTATTGCCAAGCGTATGGAACAAACCGAAAACGAA
GTACGCACCTTACAAGCGTCTTGTAAAGCGCTGGTTGAACAAAACATACCGGAACTTAAA
ATTGACGATGACATAGAAAATAATGTCGGCCCAGTAGCTGGCAGTAAAACTGGCTCGGGC
GATCCCGACTACAGCCCTCGAGGTGGATGGGTGTGGCGTGTATTACGTTCATCTCTCCCC
ATCCAACTGTGCCTTGTCGCTTTATTGTTAGCCGCTTGGTTGGTTGAACGTCCACGATGC
TGCGATGCTCTTAACTCCCTTGCCCAATCGTTAACTCCTCAACTAAGATACGTTCGAGGA
CCTCCTCCAGTTTGAGAAGCACGATAAATAAAGTTGTGGTTAATTAAGCTAGAATTCTAG
CAGGATTTTATGGATATATAGACACGGCAAAGGGTTATAGGCACATCCCAGTAGCACAAT
TTGTGTGATGCACTTTTGTATTTGCCATCGAGTGTGTTCCGAGTTTTAGCTACGTAAATG
ACGAATGGTATTTAGACAATATCTAATTCAATTTAAGAGAAAAGTAGATTTTCTTATGGA
TGTATGAGACTATATCTAGATGGTTTTTGATGACTTAATGAAATGCCTGTTTTATATCTT
TATTTAATAATTGAAAGTTTAAATAGAGAAAGGACAGTAAATAGGTTTGATTGACATTTA
CTAACATATAGTTATGGATGTACCTTAAGGTATAAACGTAGTAGAAGAATAATGAGTGAT
AGTAGAACGAAAGACTAAGCGGGTCGCTATCACGACGAACTCGCCGACATTAGCTTAAGA
GAACCGTAAAATTCAAATTGTTGCTCACAGCAAAAAAAGTTCAAATAAATAAAAAT
(5696 bp)

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