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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13605_c0_seq4
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		mRNA-decapping_enzyme_1A_[Papilio_xuthus]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0042802 F identical protein binding
GO:0043085 P positive regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:1903608 P protein localization to cytoplasmic stress granule
Transcript
Level		FPKM:2.58 TPM:2.60
ORF EntryO_BomoSK14771_complete:A_BomoSK_comp13605_c0_seq4
Sequence
(Nucleotide)
TGCTTGTTCGCTGATCAAAACTATTTTATTATTAGTAATATAAAAAATGGCTGACACCGG
GTTACGTAGTATGAATTTCGCTGCATTAAAGCGGGCAGATCCATATGCTCGTGAAATTGT
CGATAGTGCTACCCACGTTGCCCTTTACACATTTGAAGAGAACGAATGGGAGAAAACCAA
CATTGAGGGTGCTTTGTTTGTGTACAGTAGAAATGGTGAACCATACCACAGTTTAGTGAT
TATGAACAGGCTGAACACTAACAACCTAATAGAACCAGTGTCTAAAGGAATTGAACTACA
GTTAAAGGAGCCGTTTTTACTATATCGTAACGCCAAGTGCCGCATTTACGGTATATGGTT
TTATGATAAGGACGAGTGCGTGCGAGTGGCCACGAAGTTGAACACATTAGTGAAAGAGTC
CATAAAACAGTCGCAAGGCGAAACCATGCCACAGAATTCAGTTTACAATTCGTCTACAAC
TTCAACTCAATCTATAGATATCTTCAGCATGTTGAGTAAAGCGCAAGACGATTTCAATTC
TAATAAAGGTGTTGCTGGAAACAAATCCGAATCGACGCCGGCCAAAGCGCCTGACATGAC
GTCGCAAAGTGTAATGGATTTCTTTGCAAAGGCTGGGAGTGGAGCATCGGCTCAAATGCC
TGCAGTGTCTTCATTGCCCTCACCAGGGATATTCGGTCCGCGTGCCACTGATTCCAGAGA
AGTACCACAGCTTTTACAGAGGCTCATGAGTAACCCTGCACATTCAGTAGAACATATTGA
GAAGCAACAGCGATCTGTTACTCCTCAAGAAGGGCAAAGCTCAAATGGTAATTCTACACT
AGATTCTGGTATCAAACCAAATTGTATGTTCTCATTAAAGTCAACTCCTTTGGAGAAGCA
AAATCAAAGGATACCAGGATTGAAAAAAGCTCTGGATAGTAGTGATGCTAATGGAATAGT
CACCATGGAGAATGAACTCAATTTGATGCACTTATCTTCTCCCAAGACAACATCGCCATT
AGCTGCATACTTGAATCAATCTCAAGACATAGGACACACGGTAAGTTCTTATTATGGTAG
CAAAGTGGAGGATGTTGGACATTCTTATCCTAAGATTGACTCTGTAACTACTCAGCAGAA
ACCGGCGCTGATGCCCCCCACAATGTTCACTGCAAGTTCAGGTGGTGATGTCCAGCCATC
ACCGCAGCCACTCACCAGGAATCAACTCCTTCAGGCCTTTAATTACTTACTCAAACATGA
TGCAGATTTTGTGAATAAACTTCACGAAGCCTATGTCAAATCGTTTTCAGAAAAAGCATT
TTCTGTGTCATAAGATAATCTTTTATGACTGTGGCTGATGTTGCCAGCCATTATTACAAC
TGTACATCATAATAATGGCTGGCAACATCAGCCACAGTCATAAAAGATTATCTTATGACA
CAGAAAATGCTTTTTCTGAAAACGATTTGACATAGGCTTCGTGAAGTTTATTCACAAAAT
CTGCATCATGTTTGAGTAAGTAATTAAAGGCCTGAAGGAGTTGATTCCTGGTGAGTGGCT
GCGGTGATGGCTGGACATCACCACCTGAACTTGCAGTGAACATTGTGGGGGGCATCAGCG
CCGGTTTCGTGTGTCCTATGTCTTGAGATTGATTCAAGTATGCAGCTAATGGCGATGTTG
TCTTGGGAGAAGATAAGTGCATCAAATTGAGTTCATTCTCCATGGTGACTATTCCATTAG
CATCACTACTATCCAGAGCTTTTTTCAATCCTGGTATCCTTTGATTTTGCTTCTCCAAAG
GAGTTGACTTTAATGAGAACATACAATTTGGTTTGATACCAGAATCTAGTGTAGAATTAC
CATTTGAGCTTTGCCCTTCTTGAGGAGTAACAGATCGCTGTTGCTTCTCAATATGTTCTA
CTGAATGTGCAGGGTTACTCATGAGCCTCTGTAAAAGCTGTGGTACTTCTCTGGAATCAG
TGGCACGCGGACCGAATATCCCTGGTGAGGGCAATGAAGACACTGCAGGCATTTGAGCCG
ATGCTCCACTCCCAGCCTTTGCAAAGAAATCCATTACACTTTGCGACGTCATGTCAGGCG
CTTTGGCCGGCGTCGATTCGGATTTGTTTCCAGCAACACCTTTATTAGAATTGAAATCGT
CTTGCGCTTTACTCAACATGCTGAAGATATCTATAGATTGAGTTGAAGTTGTAGACGAAT
TGTAAACTGAATTCTGTGGCATGGTTTCGCCTTGCGACTGTTTTATGGACTCTTTCACTA
ATGTGTTCAACTTCGTGGCCACTCGCACGCACTCGTCCTTATCATAAAACCATATACCGT
AAATGCGGCACTTGGCGTTACGATATAGTAAAAACGGCTCCTTTAACTGTAGTTCAATTC
CTTTAGACACTGGTTCTATTAGGTTGTTAGTGTTCAGCCTGTTCATAATCACTAAACTGT
GGTATGGTTCACCATTTCTACTGTACACAAACAAAGCACCCTCAATGTTGGTTTTCTCCC
ATTCGTTCTCTTCAAATGTGTAAAGGGCAACGTGGGTAGCACTATCGACAATTTCACGAG
CATATGGATCTGCCCGCTTTAATGCAGCGAAATTCATACTACGTAACCCGGTGTCAGCCA
TTTTTTATATTACTAATAATAAAATAGTTTTGATCAGCGAACAAGCA
(2687 bp)

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