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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13605_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		mRNA-decapping_enzyme_1A_[Papilio_xuthus]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0042802 F identical protein binding
GO:0043085 P positive regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:1903608 P protein localization to cytoplasmic stress granule
Transcript
Level		FPKM:5.94 TPM:5.98
ORF EntryO_BomoSK14765_complete:A_BomoSK_comp13605_c0_seq1
Sequence
(Nucleotide)
ATTTTGAACGATTTTGATAACATCTTTCTAGTTTGAATATGTCAAATTGAACACTACTAA
CATTTTCAAATGGGTTTTTAACAGAATCGGACAATTGATTTTTTTTAACTAATTAATAAA
GGGAAATTGTTACAAAATAACTACATCGGGTTCTTTAAAAAAATTGTAATTGGGAAGATT
TTATATTTTGAAATTCCCTCAACACACTAATTTGAAAAGTTAGGTACCTACAGGTTTTAT
CACTAAATTCTGCTATAACAAAAACCTTAATATCGAATATCTTTTTTTTTGTTTTTCAAA
AAACAATGCATTCTGTTCTGATGCATGATACAGATCACAAAATATAGTTTTGTAGGCCAT
CTTATGAGTCTTGTGAATATGGACGTATTCTTATATTAAATACATGCTTTTTAAATGTTG
AATCCAAATTATTTAAGTCGATCTTTTAAAATAACAAGATAGAACCTAAATAATAATTAA
ATGAATCTAAAAAATATTTGAAATTAAAAGATATGTTTGGAAATTGAAATTTGAAGTATA
TAAATGTATAGTAAGATACATGTTTGCTTCAAATTTGCCGAGGTCAGTATTACAATATAA
TTTGAAGTATTTTCAACTTCATATGGAGGTTTTGACTAAAATTAGATCAGCTAATCCAAA
CATAAACAAAGCTATGTTAACTAAATAAAAAAACGGAGTAATGTGTAATAGAATTAATTA
AAATAGCTTCTTGGTTTATAAAATAAAAGCAACACTTATCAATACGTCGGATTATTTTAG
TTCACCAAAGCATATAAGTCTGTTGAGAAGACAATTCTTGTCCAAAGGCAAGAGCAGTAC
GCCAAGGTCACAGGCAACATCAAGTTTCTGATTCATTGACTATCAGAAATGGCAGGTGTG
AAAATTATCCACTGCAAGCCCAAGAAAGGTGCACGGTTGTAGATTTGTGGATGGTGAAAA
ACAAAAAAAATACATCCACCTGTGTCTTAATTACTAACTTATTGGGATTTTAGTTATAAG
ATTACTATGCAAGAACAAAGACATGAAAGTCACTAAAAACATTCTTGTACGAAATCTGTT
TTGAAATCATAATAATCTTTAACTTCAAGAGTTATCAAAAATCAAGATACCACCCAGAAA
CAAATTCAAAGCAAACATGTCATTTGTTCAATAATATTGTTTTGTTGAAATTCATTAATG
TTCTTTCTTTAGAACAAACTCCTAAATAAATTTTAGCATTCTACTTAACTTGTTTCATTG
AGTTTATATAGTTTAACATTTTCTTAGCTTGCAAATGTAACTTGGTTTTCCAGTGCCATG
CCATATGTTTTGCACTGGCACTCTTACTCATATAGAAACTAGGCATTTTTTATCGATTAT
TGTTTTTGAATAAAGAAAGGATGTACTCAACTTGTAGTAAATACTTGGTCTTATGAAAAA
AGGTCTCAGGATCTTTATTACACTAAAACTAAATAAGTTTATAAAAATTAAGTATATTGC
AACAAATCTTTATTTTTACATATATTTAGTTTTCTAATCTGTACTCAAGTCTTTCGTTTT
ATTTAAATTAAATTCTTTTCAAGCATACCGTAAGAGTTAGATGTGTGGAAATTCAATTTT
TTACATCATTAAATTTTTTAAATGAGTATAATATGATTTGAAAAACATTACTTAAACAGA
AATATAGTAAACTGATTCCTATATGTAACATAAGGCATATTTTATAAACGAATAGAAAAT
ATTTTTTACAGTCCATAAAAACACCTATCAAGTAATGTTGCAGCTTGGCAAGTCTCTTAT
ATTTTGAAAATTACAATTGCAACAACACGTAAAGCTGAATATCTCTACGAGATTTAATAT
ATTTTAGAAAAGTGTATACTTTGTTATGTATTGTCCGTTTTTTTGTGATAAGAAGAACAT
TAAAAGTATGATGGATGTGTAAGAACAGTAACTGGATGTTGGATGAGTTTGATTTTACAG
AACATCAAGCTGAAGCCAATTAGCTTGTAACTAAAAATATCACAAACATTTGTGTCATTA
AAGACCTGACTGAATATCACTCATCTGGAGTCACTAAAATTCATCCACTATATAAAATTA
AGTGACAACTGGTTTGCATATTTTTAAACTTATTTAAAATACTCTGTCCAAATGGTAAGT
CACTAAAAAACAACAAGTTCTACACAACATTTTTAAAGAGATTATGCTTCATATTACAAC
TGTACATCATAATAATGGCTGGCAACATCAGCCACAGTCATAAAAGATTATCTTATGACA
CAGAAAATGCTTTTTCTGAAAACGATTTGACATAGGCTTCGTGAAGTTTATTCACAAAAT
CTGCATCATGTTTGAGTAAGTAATTAAAGGCCTGAAGGAGTTGATTCCTGGTGAGTGGCT
GCGGTGATGGCTGGACATCACCACCTGAACTTGCAGTGAACATTGTGGGGGGCATCAGCG
CCGGTTTCGTGTGTCCTATGTCTTGAGATTGATTCAAGTATGCAGCTAATGGCGATGTTG
TCTTGGGAGAAGATAAGTGCATCAAATTGAGTTCATTCTCCATGGTGACTATTCCATTAG
CATCACTACTATCCAGAGCTTTTTTCAATCCTGGTATCCTTTGATTTTGCTTCTCCAAAG
GAGTTGACTTTAATGAGAACATACAATTTGGTTTGATACCAGAATCTAGTGTAGAATTAC
CATTTGAGCTTTGCCCTTCTTGAGGAGTAACAGATCGCTGTTGCTTCTCAATATGTTCTA
CTGAATGTGCAGGGTTACTCATGAGCCTCTGTAAAAGCTGTGGTACTTCTCTGGAATCAG
TGGCACGCGGACCGAATATCCCTGGTGAGGGCAATGAAGACACTGCAGGCATTTGAGCCG
ATGCTCCACTCCCAGCCTTTGCAAAGAAATCCATTACACTTTGCGACGTCATGTCAGGCG
CTTTGGCCGGCGTCGATTCGGATTTGTTTCCAGCAACACCTTTATTAGAATTGAAATCGT
CTTGCGCTTTACTCAACATGCTGAAGATATCTATAGATTGAGTTGAAGTTGTAGACGAAT
TGTAAACTGAATTCTGTGGCATGGTTTCGCCTTGCGACTGTTTTATGGACTCTTTCACTA
ATGTGTTCAACTTCGTGGCCACTCGCACGCACTCGTCCTTATCATAAAACCATATACCGT
AAATGCGGCACTTGGCGTTACGATATAGTAAAAACGGCTCCTTTAACTGTAGTTCAATTC
CTTTAGACACTGGTTCTATTAGGTTGTTAGTGTTCAGCCTGTTCATAATCACTAAACTGT
GGTATGGTTCACCATTTCTACTGTACACAAACAAAGCACCCTCAATGTTGGTTTTCTCCC
ATTCGTTCTCTTCAAATGTGTAAAGGGCAACGTGGGTAGCACTATCGACAATTTCACGAG
CATATGGATCTGCCCGCTTTAATGCAGCGAAATTCATACTACGTAACCCGGTGTCAGCCA
TTTTTTATATTACTAATAATAAAATAGTTTTGATCAGCGAACAAGCA
(3527 bp)

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