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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13591_c0_seq2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_41-like_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005689 C U12-type spliceosomal complex
GO:0030626 F U12 snRNA binding
GO:0032502 P developmental process
GO:0097157 F pre-mRNA intronic binding
Transcript
Level		FPKM:6.77 TPM:6.81
ORF EntryO_BomoSK14733_5prime_partial:A_BomoSK_comp13591_c0_seq2
Sequence
(Nucleotide)
TTAAAACAACAATAGAAATTTACATTATTAATACCTAGTTTTATTTTAAATTAGATCAAT
TTATAGATGTGTTCCAATACTCTACCAAAAGAGTTTGAGAAGAAATCTGAGGTATTACCT
TTTACTAAATATGGATTGTCTTCTATCGAAGAATTCAGTCGGGCAGAGGAAGAAGTGCGG
CATTTAGAGTTACTGAAAAAAGCGGGTTTGACTACTGACGAGATCAAACTATATCAAGAG
AATGAATGTGGTAAATTAAATCAGCAAAATAAAGTTGAGACGGGTGTGTTAAAGCAAAAA
TTGCATTATATTTACACAAGAATACAAAATCTTAAAGAGCAAGTAAAACAACAAAATAAT
CAACCTTCTACATCTAAAACTGATGTATCAATAAAGAATTTAGAGAGAAACATACCTAAA
AACACATATTGTGATGGACATCCTATGAATGATATAAAAACTTTAGAGAATTGTCTCTTT
GCGCATCTTAAGGACGACATTTTACCTTTGAGCAAAAGAAGAAAACTATTACGACGTTTA
GAACGTAAAAAAGAAAGAATTTTATCTCAGAATAACACAGTTATACTTGATAACTCAAAT
AGAAAACCAGTAAATCGTCCAGGCAGCCTTTGGGATGTTAAAGAACTGCAACATAAGATA
AGTGATCCAGAAAGAAATAAAGATAAACTCATTGGACCAGTAAAAAAGACATTATATACT
ATTAAAAATAATAAAATCGTAAGATTAGAGCCAATGGATTCTTCAGAAAATAGTGAAGAC
GAGTACAGAGCAGTCAATATTGTAGTGCCTATAAACAATGCAGAGGCACAATTGCTTGAG
GGCACAAAAATGAGTATAGATGATATCAAGAAAATTGATAGATTTAAAGATTATGAACCT
GGTACACCTTCAAAGGTTTTATATTTGAAGAATATAGCACCAACGGTGACACAACAACAA
TTGTCTGTGCTCTTCAATCAGTTTGTATTGGACAACGGTGGGCCTATTGATGTTCGACTT
ATGACTGGTCGAATGAGAGGGCAAGCTTTTGTGCGATTCCAAAATGAGAACTTAGCTATA
CAGGCGCTAACAGAAATAAATGGTACAATTGTATGTGGTCGTCCCATCATAGCACAATTC
GGACGAAATACCAACAGGGTACAGCGCCACGAGCGTTAAGAAACATAATCATTATAATTA
ATTTAAAGTGATATTATTTACTAGTTAAGTTTACTCTATTATATTATGTAACCGTAAATA
AATTGTCTATGACGTTCTAATTGTTTTCTATTCTATCTTTTAAATTTAAGAATTTCCTTT
ATACTAACTTAGGGCTACCAATCTAATGTTTCGCCAAAAAATAAATAACATTTCAGGGCA
AAAAAATAATACATACACAGCATGTTTTTGAGAGAAGCAAAATTCCACCTTTTTTTCTAA
ATTAAAGCACTAATATAATCTACATCCACTTACAACAACCAAGTTATGTAATTTTTATAA
TAATAAAAATATGGTGAACCTGGAAAGTTAAATTACTGTTAACCTCTTTTTTATATTTTT
TGCATATACAAGTACACAGGCTTACAGTCTACCAGGTATTAAGAGATACTCGCAACCCTT
GACCATCAAAATATGAATCTAAGCAATAAAAAAAAATATTCAAACTGGAATAGATGAACC
GAAACCAATGTTCATGATTGCAAACAGACAGGATAGTAGTACTCAGCTGTGCAGTGTTAG
AATACGCCTTACGATCTCTAATTCTATAAATTTTCATTTGTACCTACCTACATACCTACA
GGATTGGAACACTGGCACTGTCGCATCCTTTGATACGAGTACACAAGGCTTCTTAACCTT
TAAGCCACGACTTCTATATATTCGACTCATTAGATTCGTCTTAACGAGTACTATACACAA
ATGGTGCATTTAAACTACACTTTATTATAAACTTATATGGGTTCTTGCGATTTTAATCAA
AACGTTGACATATAAAAATACTGAGAACATTCCCATCATGTATGTTACACTTTAATCCTT
ATTCAATAATTCTATCCTAATTCGATTTGTAATACAATCATTTTAACTTTTGAATTTGAA
GAATAAAAATTTGATTTTGTGTAAAAAGTAATCTAAATGAAATTATGAACTGTGTCTCCG
TTATAAAAGATTGTTAGGTCCCTCTCCTCACTTTTTCAATATAAAGGTACATCAACTTCG
ATAGTCAAAATATTGATCACTCAGTATAATTTTTCACTATAGTCTGTTCACTGAGTGTTG
TCCTTCGGGGAAGGCTTGCGTCGTCTTTTGACGACGCGTTTAGGCGACGATCATTCATTC
TCTTTCTTAGGCTGTGGCTCCTCCTGTTTGACGTCGTGATGCTGTGGAGGCGCGTGGTGC
GGTAGATGCGCGTAGTGTTCGGGCGGGGCGGCGGCGGGGTAGTATGGGTGCGGCGGGGGT
GGGGGGGGGGGGGGGTGTGGGGGGCGGGAACCAGGGGGGAAGATGTGGGGGGGGGGGGTG
ATTGGGCGGGGGTGCAGCG
(2539 bp)

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