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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13563_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		clathrin_heavy_chain_[Bombyx_mori]
Ontology
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007291 P sperm individualization
GO:0007594 P puparial adhesion
GO:0008021 C synaptic vesicle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030129 C clathrin coat of synaptic vesicle
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0030135 C coated vesicle
GO:0030136 C clathrin-coated vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032051 F clathrin light chain binding
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040008 P regulation of growth
GO:0045451 P pole plasm oskar mRNA localization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0071439 C clathrin complex
Transcript
Level		FPKM:28.18 TPM:28.35
ORF EntryO_BomoSK14553_complete:A_BomoSK_comp13563_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTCTTCATTATTATATTCTTATTACAATAATAAAATTCAGGGAAACAGTAT
CATACATGAATAAATACAATTCTAACCATTAAACAATGAACTTTCCTTCTACATTTAGAT
AATTCTCTATAAATCTTCGAAAGAAGGTTTTAAACATTTCGCAACAATGTATAGATTATT
TCGTTACTTCATTTTCTTTACAGGAATGATTATTTGAATGATTCAACGTTCTACATTAGC
GACTCGCGGCTATACGGTTATTACTATATAACTGTATGCGGAACCGAGATAAACTTTAGA
TTACTAATACCATAACTCGAGGAATTAGACCTTGTGTTCAAAAAAAATTAACAAAATAGA
AAAAAAAACGCGTCCTCTATACGCGTTCTAACTATCTAAGTGAAGGCATCAAATTCAGGT
GATCACGTGCGTGCGGTCCGCTTACACACTCGCACACATACATTACACAAAAATTAACAT
CATACCACTATTTTCCGTCTAAAACTAAACCTAATCATATCTAAATAATATTCATAATCG
AATAATAAACATTTTTCCTTTTTAATTTCAACTGGCTCAAAACTGTAAACATTATATACA
TATTACAATATATTAAGCATCTCTTCTTTATGAGAGAACTGAAATTATTGCACGGTAGAG
AATATAATATTAATTAATTTTCGTTCGACCAAAATGATTTCTTGTTTCATTACAATGAAT
ATAAATTATCTTTAAGTAGATTATATTTTATGTAATAATTTAATGTAATTCTCAGATGTG
AGAAAGCAATGATAAAGTACCGCCAATTATGTACATAAGTAAATTCATTAATTTACTTAT
TTATTTACGTAGTGGCGAACCAAGCTTTCACTGAAATAATTCAATATATATCTTCGGCTG
TATTATCTTCAACAATATCTATCACATGGAATCTTTTAGTTTAAATATTATACATTTTTT
TAATCAACTACGTTCGTTTATAGAAACTGCAAAATTAGAATATTAGTATACATATCTCTA
TATTCGCAGAATGCACGTTACATACGGTTGAATTATAGTATCTGTTTAAGAAGCTTTATA
TTTTGAAAACTCATTTTATTTAAAAATAAAGCACTTTTAACAATACATAGTCGATTAGCG
ACTATACTAATATAATTTGTACACGCTAAATTGTATGATTCTCAAAGGACCAGCAGAAGA
AGCAGCAGAGAAAGCACCCCTCAGCTTTACCGACAGATTAATTTTGAAATCATGTTAATA
TAAATGAAAGATTAGGCCACAGCATCGCAGAAAAATTAAATCATCAAGGGATTTTACGTA
ACAATTACGAAGGTTGTGAGGGCACAGCATATATTATTATATATATATAAGTTTATATCT
GGTCGCTATTGAAATATTCACGTAAATCTCGTTCTGAGGAGGGCTCGAGAGCTAAATCAG
CTAAATGAGTATTCCTCTCAATATAATAATTTTGTTTAGCAAAATGTACCTACTGCAAAC
ATAGAAAGTACTACCGCCATAAATGTTTAAAATTAATTAAGGTTCTCCATATATAGCGGT
ATATTGTTAGATGGAAATGTGTGAAAGTTACAAGTACTTAACAACATAATTTATATTTTT
TTGTCGAGACTGAAGTTTTTGTGTAGGCGATAAGGACATTCTGAGTGTCATGGCCTCGAA
TCGTGTGGTGTAGTGTCGGTGTGTGGGAGGGCGCCTGTCTCAGTAGGGAGCGAGGTTCCC
CCAGACGAGGCGGGTGGCGGCGTTCTACATGCCGTACCCGTGGTAGGGGGCGGGCGAGGG
CGCCTGCGCAGTGTACCCGTACTGCGACGGCTGGGGCGGCACCACGTACGGCATCGATGG
ACTGGCAGTCAGCATGAGTTGTGGTTCTATTATCATGGTGGGCTTCGCTTCGTGCTCCGC
ATTCTCGGTGCTTCGCTTGGCGTCTGCTTCTTCAAGCTTCTCTACTTTAGTTGTCAACTC
GCGAACTGTCTGAATAAGATAGGGCATGGCAAAGTCCATGATGTTATGTCTCCATGCGAG
CTCGATGACAACATCGGGTTTCAAGAGATCGTAACACTGATATAAGCAAGCCGAGAAACA
TTCGAAATTATCTCTTTCCAAGAACCAGTTGAGGAGCTCTTCGGCGACCTCGGGCTGGCG
CGACTCCGATGCATACTCCATTGCATCGGCGTACAAAGCGTCTTTCTTACAGAGCTCCAC
GCTTTGCTTCCATCTGTTATTACCTTTGTATAAGTAGGCGGCAATCCGTCTGAATTCTGT
AAGTTCGTGTTTCTCCAACTGTTGCGCTAACGCAATAGTGTCGAAGTTGTCGAAGGCGTC
GATCGATGTTCTTAAGCCTTGATAATCCTCCTCATCAATAAGCAGCGAGTTCAATGCTTC
ATTAACAGCCTTATTGTTCAAACTCTGCACTGATCTTAAATAGGCCTTCACTAGTTGCAG
ATGACCAGCTTTGGTGAAGAAGTTAACTGCTCGGGTGTGATCCATGCGTGGGGCCAGTAC
TAACAGTAGATCGTTAAGGAGAAGTGGCTTGTAGTCTAGGTAAAATTGGATAGCTTTGTA
GTACAGTTCCATGTTCGCGACTTTAGTAATTATGTCTTTGAAGTGTCCCTCGCGCCAAGC
CTCGGTGGGATGCTGCATCATCGTGAGAGCAGCGTTGTCATACTCCTCATACTTGTCATA
CAGGAATACCAGCTCTGACCAAAGATGGGCATGTTCAGCAGCACGGAGTACCTTGGGAAT
GTTAACGCGTGACCAGAACAGTTCGAGGTGCTCCCTCATCTTCACGGGCTTGTATTTTGA
ATACAAGATGGCGAGTTCAGTGAACATTCCCATGTGAGCTCTCTCCAGCCCTAAGGCAGC
TTCTAACAAGCTGATCAGCTCGTCAAAGTGACCTCGGTCCTGGTAGTAATTGATGAGGTC
TTCAAGTTCGTCAGCATGTACTACAATGTGCAATCCGCACATTTGCGCGAGTCTAAATTC
ACCGGCGTCCACGCACGCGAAGCAGACCTCCTTCCATGTACGCGTAGAGTTGGCCTTACG
CGCGCTGTCCACGGCACCTTGGAATTCTTTCAGATGCACCAAAGTAATGGCAAGACGAGC
GAAGTTGCTGACGTTGTTATACAAGAGTTTCGCAGCGTTGTACATCTTATCGTCGAAACA
ACGGTCACCGATTTTCTGGATGTCAGCATGATTCGGGCCAGAGATAAACTCTTCCAGATC
GGCGAGGCGACCGGTGCGGGCGTAAGCGTAGATCAGTTCGGACTCTATGTACGATTCGCG
CGCCTTCTTCCGGGCCATCTGCAAATACCTAACAAGATCATCCCAAGACTCTTGCTTGGT
AGCAGTAGCGACAACGTCCATGTAAGCGGAGGGATCGTCCGCTTTTATGTAAGAGTCGAT
GGCTTCCTTGACCAGACCTTGCTGTAGTTGAGCCTTTGCGAGCTGAGACCAAACACCAGG
CTCGTTGCATCGCTCGGCAAATTCATAGGCACGTTCGAGATCTTTCACTTGTTCAATCAG
TACTTGTATAGCAGAAGTATTAACATCGAATTTTTTGAAGATAGCGAATGCCTCCTCGTA
TAATTCATTGTTGATAGCAATGTTGGCGATATCAGGTGCGTCGTAGTTATCCAAACGATT
GATGTATTCCATTACACGAGAACGGTCCGCCTTGATAGCAGTAAGAATCAAAAGGTTCTG
AAGGTTCCTGTGATCAGAGAACACAGAATTGTCAAGAACAATCTTTTCAAGCAGCTCAAT
GAGTTCGTTGGGTAGGTCGGCTGTCATGAAAGCTTTTACAGTAACAGAGATATCTTCAGG
ATCTTGGGTTTCAGAAAGAGCTGTTTGCACCACCTGGTCAATAAGTTGCCTCTTGTAAGG
ATTCTCCTCAGAGAGCACCTCGAGCCAGAGGTCTTGATCCTTCCTGCGCACCAGGTAGCG
AGCCTGGGTCTTAAAGAGAGAGTTGTCGTTGCAGACGGCGATGAGCTCGCGGTCGCACTG
TCCGCGCTCGTACGCCACGCACGCCAAGTGCGGGTCGCGCTTCTCGCAGTAGCGGCCAAC
CACGCGGGAGTCATACCACTGATTTTCTCTGAGGAATCTCTCAGGATTGTTGTTGGAATC
AATGTAGATTTTGGCTAGAGCATTATGTGTGGCTGGTTCGTTGCTGCCCTCATGTACTCT
TGTTTCCAGCCAAGGAAGGAGGAGTTTCAGTCTATTCCTCTTTTCCACTTCAGCAACCAA
TTCATCAGTCGAAAACTGTCCCCGAACAACCAAGATCAGGTTCTTAATGATGTCTTCAGC
ACAATCAACATCTAACAAGCCACCAACTACGACTGGCAGACGAGAAGGATTAACCTTTTG
TACATAAATCTCAATATATTTCTGAAGACTGTTTCTATATAAGTACAAAACCAAGTCGTG
AACAAAGTCGAATCTATCACAAACTATGATAAGAGGCAACTGGTCGGGAAGCTTTGCTTC
TTTGAGGAAATTCTTCACGCGCTCTGGGTTGTAACAGCTGGATTCGCGACAGATACGCTC
CACTTCCTTGATTTGACCAGTCTTACATGCAGCCTGAATATATTTAAAGTGGACTTCTGG
ATCCTGGCTGAAGTTTACAATTGATCCCAGGAAATAGAACAACCCTTCATATGTTTTGAA
ACTCTCAAACAATTCAATTAAAGCCTTTGTTGTTAGTTGCTCATGGTATTTAGTGGCGAT
CTGGACACAAATCTGCAGATTCTGACGGATGTTAGCCTGAAGCATTGCTTTCAAACATTC
AAGGGAGTCCTCTACAGACAAACTTCCGAAGTATGTGACAAGCCAGTCAGCTGGTAAAAG
GTGAGTATGTACAACAGCTCTCTTGATGTCATATAAGTCAGTGTAATGCTCAAGCGCCCG
TTGTAACAATCCAGCCTTCTCGCAGAGTTGAGCAACGTGCGCGCGATCGTACTGCGTGAA
CATCGCGTTGCCGAGGATCGCATCTGCTACCTGCGGCGCTGACATCAAGTTCATTTCTAG
AAGCCTAGTTTGTAAAGGTCCTTCCTCAGGTCTGTTATTCTTCAGAGCGTCCAAAAGGAA
GGCTGTACATTGTTGCACCATATTTTGTTCCATGAAAACATCTACTATCTGATTGATGTC
TGCTAGAGGGGGATCTTCGGCGACTAACATTCCTGCAAATCCCGCCCCTTGTTCAGGATT
AGTACGCATCACTGAACGAAGAAGATAAATGTAGTCTGGAGTGTAGCCAACCTTCTTGGC
ATATAATACAATTTTCTGGAATTGCCCAGTCTCAGCAAAGCACTGAATAACTTTACTGGC
GACGTTGGCACGAAGGTAAACTGAGAGAGCAAGTGTAGGGTCTACTTGCTTTACAAGATC
TCCGAGTTCTTCTGAGCACTCCAATTTTTCTTCCTTCAACCATTTCTCGAGCAGTTGTTT
TCGCCCTTGCAATAAAACAGGACGACACAATTCAAGGGATTCAAACTTGTTGAGTTGCGC
CTGATCAAGGAGGATACCAAAGTATTGCAACAACGGCGAATTTTGACCTGGCTGCGTGGG
CACTTGTTGGAAACGCTGGATAGTTTGCGGTGTACGGAGGATTCCTCGAGGTGCCATAGC
TGCTACCTTAGCAGCCTCAATGTATTGTCCATTCGTGAACAACATGTTGAATTTCCTCAC
AAACAGTTCTTCAGCACCTGCCAAGTTGTTACGCACGGCCATGCGTAACGCTAACTCGGG
GTTCTGGAGCACGGTGTTTATGTACGGAACTATTGAGTCTTCCTCTACCGTCACTGATAG
CACTTGACCTTTGCGGTTTACACCGATAATACCACCAGTCGCTTCATGGGGCGCTGTCAC
GAAGATCGTGTCCGACGAGATACGGTTCATGTAAATGCACGTTCCCGTCTCGATGTCGTA
CATGTGAATGTATCCATATTTGGTAATCAAGTAAATGACGTCATACTTCGGCGATACTTG
CATCGCCACTGGGAAATCATTCTGCGCCTCCGCTGGGAAGAACACGTCGACGGCTTTCTT
CGGAAATGGTTGGTTGCCGGCCGGCGTTTGGCCAACCTCAATAATGTGTAGTTTGCCGCC
TTGGGCAGTCCTCACAGCGAAGCAGAAGAGAGTGGACGGCTCGGCGTTGCCTTCCGCTTT
GAATGTGGCGAATGACGCGGCGTGTCCCTCGATAGGCTGAGAGCACTTGCGCTCGACAGA
GTACAGCTGCATAGCTCCGACTACCCGGTTTTGTTGAGCAGAAATACCGACCAGCAGTAA
CCACTGTTGCTTCGGATCCGTCCTGTAGTTAATGATCTGGCAATCGGCAAGCGACGAATG
CCTGTCGAACATCTTTACGGGTGTCGAGTCGCCTTCCATCGACCAGTGGTACACCGACAT
CTTGGTGACCAGAGCGAGTGTGTTCAGTGAAATCCACTTCCAGAAAACAATGTCTTCGGT
CATGGTGTGCGCCTTCATTTTGGATTTCATCTCGATGTTGAAGATTTGAAGTGTTTTTTG
AGCTTCAACACCAGCTTTGCCTTTCAAAGCAATGACTTTACTAGCTGGATTCATGATAGC
AGAGTCTGCACTGATTGGTCGTCGAATTGGATTTGTTGGATCTGCCATATCAATAATGAC
AACTTCTGCAGTCTCACCAACCTTCTCGCGAACACAGATAAACTTGTCCGATTCCATGGT
GAGAGTGTTGAAAGAAATAGAAGCAGGATTGATTCCCACATTGGTAAGCTGTAAATGTTC
TTGAAACCGTATCGGTAATACTTGCGCCATGTTTATTGATCACTCCGTCCTACACAAACC
GAAAACGAAAAAACGGGCGACCCTTTTAAAATCGCGAACTAACTTCTAGAATTCTACATG
AAGAAGAATAGGGGCGGATAAATTTGGCTGTTTCGGAGTAATATGACGAATAATGTACAC
CCTCGGATGCCACATATACAAATGAATGAAATGGTAGACAAAAGAGAAAGAGAAAGCATG
ATATAAACTTCCATCACAATTTCTG
(7045 bp)

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