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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13562_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_ubiquilin-1-like_[Amyelois_transitella]
Ontology
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0019900 F kinase binding
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031396 P regulation of protein ubiquitination
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0034140 P negative regulation of toll-like receptor 3 signaling pathway
GO:0034976 P response to endoplasmic reticulum stress
GO:0035973 P aggrephagy
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0048471 C perinuclear region of cytoplasm
GO:0071456 P cellular response to hypoxia
GO:1901097 P negative regulation of autophagosome maturation
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:26.84 TPM:27.00
ORF EntryO_BomoSK14551_complete:A_BomoSK_comp13562_c0_seq1
Sequence
(Nucleotide)
TTTCAAGCGTCGATATGTATTTAAGACTAATTTGTAATGTATATAAGTAATATGTGAAAT
GAAACACGGATTCCTTTTTGTATTTATTTATAATAGTTGCATTATGTCACAATTACGTTA
CACCCAGATTCATTCAAATCAAGACATTTCTAGCAGTCTAGGATACATCACACAGTACAT
TTCTATTACATTGGCGATACTGGTGGACAGATTTAGAAATATCGTTAATTTACTTTTCTA
TTGATTTTTTTATTATAAAATAAGGACTTTTACGTGTAGGGAAAGTATGAGAAACTTTTT
ATTTCTGAATAATTATTATTGGTGTTTTATTTTAACAAAGAAACGAAGTTAATTCTTCAG
ACTTTTACAATTGAAAATCAATTCGCTACAAAGTACACTACAAGCGAAATTTTATCATAT
TATGAATGTTTCTGATCATAAATATTAAAATATTTTTAAAGAAATTTTAAAATAAAACTA
AGCCTCACCTTTCCAGTCACTTATGAATTTATAATTTAATTAGTTAATTAATTGGTACAC
AGTTTTTGACAGTTTATATAATTTATTGCAATTTGTTAATATTATATTGCTGAGAAGATA
CAATTGCTAAGATATTCTAGCTGATTGTTGTGTAACAACTATCTATTACTTCATCATACA
TACAGTTTACTAAGTTTATTCTATAAAATGCTATGTAGTTTTTATAATACCATATGCATG
GTAGTGCAAAAGATTTTTCAGTGGAAAAGCAAACTATTTACATAAACTTATTCTTAATTT
GACGTTTCATAACGCAAATCTACTAAAACGTCCGTGTTATTAAAATAATGTAACAAAGAA
AATAATTAAACTAATTAATAGAAATAGAAATAAATTTCTATACAAATACAGTTGTAGTGT
ACAAAATATTGATTTTATATCATCGCTACGTAAAATCAGTGAGTAATGAGTGACTTGTAA
ACAAAAACTTCTGAATTGTTTACTACCAAAGGAATGAATAAAAATTAAATAAAGACACCT
TTTACCTTTATTAAGTCTAATTACTACAGTAACATACCACAATTTTTAACTACTATCAAT
CAATTTGGGTACTAGTTTGGAATAAATGAAATTAAATTAAAATTTGTATTATGAAGCAAA
AAAAGGGCAAATATTTCATAAAAACGTTTCCCCCAAAACCATTATATTTTAATATAAACT
TTTTCGTGACCGCTGTCTTTTCAAACACGTTATACTAAAGCAATCATACATTAAAAATGA
TGCATCAGAGTAGGAATGTAAATTTGGACATCTGCCTGGACTATTTTAACGCTAAGAAAT
TGATGACGAATTAGAAACTATTAAATTTGAACGTTAAATAATGTGACCATAGGTGTAAAA
GTCTGAGAACTTTAACAAAAAAATTTATTGTTTTATTCTACAATTTTTAGGTGTCAAAAA
TATATGTATTAAAATGATAATGCAAAAAACTGAATGATCAACATCTAAATGCAATATTTG
TAAAAGACAGTGGCGTTATAGGATGAAACAAACGTTATCGCTTTATCGCTGACAGGGCGC
GGTAGTGTTAGCTCATGGAGAGCTGACCAAGCGCCAGTAGCCTCTCCACCGCCGCGTTTA
CATCCCCAAATGTCGCGATTAGAGCTTGTAAATTGGCCTCCCTATTCAGGAAGCCCATGG
CAGCCAGTTGCTCCAATTGTTGGGAATAACGTTGCTCAGGGGGCTGCTGTGTGTTCGTCT
GGTTGTTCGACATGGCCGACATCATCCGTTGCATAAACTGCGTGAAGAGTTCAGAATTGT
TTTGTTGTCGTGCCTGGGCGGGGTTCTGGGCAGCGCTGGGCGGTTGGGCCGGCGGCGTGG
CGGCGGCGGCGCCCACGCCCATGCCCAAGTTGTTGACAAGGCTGGGCGCCGCTGTACGCA
ACTGTTCCATGCCTTGTTGTATTTGTAGCAGAGCATTCAACGCCTGCGGATTAGACATCA
TCTGTTGCATTTCAGGGTTCTGTAGCTGAGCGAGAAGTTGCGGCATCATTGTGCGGATTT
GGTCTTGAAGTTGCGGATTGTTGGCGAACATTGGATTCTGATTAATTAGTTGAGATGCCA
TTTCGGGGTCAGCACTAAGGGCCTGTAACATGGAGTTGGTGTATGGCGCAGAGAGCATAG
ACTGGACAAGGCGAGGATTTTCTGACATCTGTTGCAGAAGAGATTGCATGCCGGGTGTAT
TGATGAGGCCGGGACCGGAGCCCGAGCCGGCCGCAGAGGCACTGCCCTGGGAAGCTCCGC
CGCCGCCTCCTCCTCCACCACGCTGCCACGGGTTGGGTAGCGGCTGCCTGTTCTCAGATC
CTTGCTGCGGGTTTGTGCCGTCAGAATTGTCTACGAGTCCAGAGAAAGGGTTCCCTGCCA
TGCTACTGGCCACATTGAGCATCGGTTCCTGTATGTCCCTATACATTCTTTGGAGCGCAT
TGTAACCACCTGGTATACTTTCGAGATTGGAGAGGGCGCGGTCGTGTGAGCGCATCAACT
CTTGCAACATAGCGGGGTTGCGAGCCAACTCCATAGTTTGACGTAATAATTCAGGATTGT
TTAACATATGACTGATTTCTGGATTTCTAGACATGAGATCTTGCATTTGTGGGTTGGAGG
TGATGAGGCTACGCATATTCTCAGGATCATTCATCATCTGCTGCACCAATGGATTGTCTA
AGACTTGTCTGAGCATATCAGGGTTGGACAGAAGTTCCTGTTGCATTCTAGCCTGGAGAT
CCATAAAAGTACTCTGACCAAGGCCCAAGCTTTCAAGACCCGCCAGCCCACCCAGCGAGT
TTAAACCAAATGGTGTAGCACTGACGTCAGCTGGGGGTCTACGAGCCGCACCCTCCGGTT
CTGGTCTTGGAGGAGCTTTAATCACTAGATGCACTGTCAACCCATCTTTGATGTTGTGTT
GCTTCAGGGTATCGGCATCATTCATGATTTTCCCGGCGAAAATAAGACATAATTGTTCTG
GTTCTGTACTGAATTTTGAAGACAACACTTCTTTGAGTCTTTTGATATCGGCATCTTCCT
CAATTTCAACTTGCTGCTTCTCTTTCGGGGTTTTAACTGTGATCGTAATTTTTTTAGGGT
CGTCTTGTCCCTCTGCCATTTTGGCAATTCTAGAATGACTATGTACTTTGGCGGAAAAGT
AAAATTTATACGAGAAAGACAAATTGACGAATAGCGTTGACTTGTATATTGTCTATGGGT
CAGTATGACGGCTAACTAGTA
(3261 bp)

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