SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13554_c0_seq4
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_homeobox_protein_extradenticle_isoform_X5_[Plutella_xylostella]
Ontology
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0043565 F sequence-specific DNA binding
Transcript
Level		FPKM:1.82 TPM:1.83
ORF EntryO_BomoSK14538_complete:A_BomoSK_comp13554_c0_seq4
Sequence
(Nucleotide)
ATTTGACAGCACAAGTACAAACTGGCACAAAGGGAGGCGGCCATTTTATAGTTGGTATTC
AACGAGTGGAGTTTCGTTCTTCACGTTTACTTTGAATTTTGGTTTACCAATTGAAATTGA
AAATCACGTACAAAATAAGTATACGTAATTAGAATAAGACATTAAAGTTATTTATGTATT
GACTGTCAAGACCAGTTAGCAATGGACGATCCGAACCGGATGATGGCGCATAGCGGCGGA
ATGATGGGACCGCAGGGTTATGGGCTGCCTGGAGGAGAAGGCGCACCAGCCTCTGAAGGA
GGCGAAGCTCGCAAGCAGGACATTGGCGAAATTTTACAACAAATAATGAACATTACAGAT
CAAAGCTTAGATGAAGCGCAGGCGAGAAAACACACGCTGAACTGCCATAGAATGAAGCCT
GCTCTGTTTTCAGTACTCTGTGAAATTAAAGAAAAGACAGTGCTATCTCTGAGAAACACT
CAAGAGGAGGAGCCACCTGATCCCCAGCTGATGAGGCTTGACAATATGTTGATTGCGGAG
GGTGTAGCTGGACCAGAGAAAGGTGGAGGTGCTGGTGCTGCCGCCTCGGCATCTGCTGCG
GCCGGTGAATGGGATAATGCCATCGAGCACTCGGACTACCGTGCAAAACTGGCGCAGATA
CGGCAGATCTATCATCAGGAGCTCGACAAGTACGAGAATGCCTGCAATGAGTTCACTACA
CACGTCATGAATTTGCTAAGAGAGCAAAGTCGCACCAGACCTATCACCCCTAAGGAAATT
GAACGCATGGTGCAAATAATTCACAAGAAGTTTAGCTCCATCCAGATGCAGCTCAAGCAG
TCCACTTGCGAGGCAGTGATGATTCTGCGCTCACGTTTCCTGGACGCGCGCAGAAAGCGC
CGTAACTTCAGCAAGCAAGCGTCGGAGATCCTCAATGAATACTTCTACTCGCATCTGTCG
AACCCGTACCCCAGCGAGGAGGCGAAAGAGGAGCTGGCGCGCAAGTGCGGCATTACCGTA
TCGCAGGTCTCTAATTGGTTTGGCAACAAGCGCATTCGCTACAAGAAGAACATTGGCAAG
GCGCAAGAGGAGGCCAACCTTTATGCTGCCAAGAAAGCAGCCGGTAGTAGGGATGAATTC
CGTTCCGGTGGAGGGTGGGGACCTAATGTGAAGCAGCTGTATGAGTAGTCGTGTGCGTGT
GCGTGTGCGTGCGGAGAGTGGTGAGTGTGTGCGCGTGTGCGTGCAGCAGCGGGCGCGTCG
CCGTACTCGCTGGGCGGAGCCTCGGGCGCGGCCACTCCGCTGATGTCGCCGGCGCCGCCC
CAGGACTCGCTGGGCTACTCGCTGCCGGCGCCGCCCTACGACCAGCAGCCGCCCTACGAC
GCCTCCATGCCCTACGACCCCATGCACCAGGATCTATCGCCCTAATCGCCACACATATGT
TGACGACATGACGCATAATCGTGCAGCTTCCACTGAATTGCCATTTACATTACATAATAT
TATGTATATCGTTAGGTAAAGGAGTACTGCGAGTGCTCGCCTCTACGCGCCCTCTCGGAA
CACAACGACCTCTGCAACCTGCAATATTCCAAATCAATGGAATGTAAATTATTTAAAACT
GTTCACTGCTTGTTTTCTCATGTATTTGAATATTTAAAGTTCCATTACTGAAGTATTGTT
ACGATGAGAAATGTGTTCTGAGAGTGTAGCCCTTGCCTTAGGACATAGAACATTGTATAC
TATGCATTATTAGCACGTTACATAATATTTTTATCGTATTTTTGGAGGTAAATGTAATTG
AAATGTATTTAATTTTTATTAATCTATATGACTGGCCCCCAGTATTTATTTTATACAATA
TTTTTCTAAAACGACTTGAAAAGGCAACTTTATTAGTATTATTTTGTTTTTATTATTATT
TTAATACCAGTTATAATTTTTTGAAGTAATTATTTGGACAGTATTAGTATTAATTATGTC
GAGAATCAGAAGGCCGGGATCTCTGTACGTTCACTATTCAACTCTACGGTGGTTATATTT
ATACGATAGCTGTAAGTCTTAGTTTATAGTGTAACATTATAGATTTAAGGGATCAGATAT
TTTGTGCTGTAATATTTCCACTAATGCGTCCCTACCGTGTATACTAAAATGGCTTAGATA
TTGTTATTTTCCGACTTGGTACTTAACTAAACATATGTTATCGATTTTAATTTAGTTCTC
ATTTTAAATTTAACAGCGAAATTTCGGTCCGCCCTCAATCATGTACGTGTTAGATCTGCC
CATTATTATTGCCATTATGAAAAATTAAGACTTGAATTATGTTTTTGATTCATCTACAGA
TTAATGTTTGGAACGAAATTTGACTGTGTTGCCATTCATTTATATGTAGAAAAAAAAAAA
ATGTCTGAGAAAAGTACGCACGCCCATGTTTATATACCGTTGATAGTGCGGACATTCGTG
TGCAATTTTATATTTTAATGAATGGTTGTGTTACTGTGTCGAGCATGTTAATGGAATTGA
TTATTTTATACTATTACTTGATTTTTTAATCGATATTTTGAATGTAATCATGTGATTATT
ATTTTTATTATTTGACATGATTTTTGTTGTGAATATATAAAACTTCAGTGATTTTTTTTT
GTAAATTTAACAACATGGTGCTGTCGGTGCGGCATCACTTTATCTCGTTCAGTTGTAAGT
TTTATTATGTTTCGTCGTTGACTATCGCAGAAGGATCAAGACTATTTAGTTCCACGTAGA
CGACTATTACGGAAACGTTGCGAGCGTCACATTATACGTGTTCTAAAAACAAAATATCTG
AAACAGTATACGAGAAATTAAACGGAGAAATTAAAAAAATATTTGTTTAAAACTGTGGAA
CGTTAATATTATAAAGAGACGCGTCGTCGCCATTAATAATTATGGTTTAGAACTTACTAT
ATTTATATGTGACGACGCGGACACCATGTATACGACGACGAGTTCAATGTTATTGCGACC
ATCAGATTGACTAAATACATTTTTTGTGTAGTTATAAAAAAA
(3042 bp)

- SilkBase 1999-2023 -