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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13553_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_irregular_chiasm_C-roughest_protein-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
Transcript
Level		FPKM:5.87 TPM:5.90
ORF EntryO_BomoSK14534_complete:A_BomoSK_comp13553_c0_seq1
Sequence
(Nucleotide)
CGCCTACACGTGGGTGGCCTGGGCGGGACCGCCATTACCTGTCGGTGCGGAATTCCTGAC
GGCGGAGTATGGCGGCGGTGCGGGCGTGGCCGCGGGCTTCGCCGTGTGCACCTGATTCCC
GTAACCTATTGAACTATTCCTTAAGTATGGATTACCGTAGGTAGCCGAGTACCGCGGGTC
GACTGCAGTCTGCGGTCTAGGGTTCGGTTGCGCATAGATTGGCGTTTGTGGACCCTCTCC
ACCAGAGGGTAGACCTAAATTGTTGATGGCGTCGCTTTCCTCGGGCTTGTTCGTTCGTTG
CAACGTATTATTTTGCGATCCATTGCTGTTTGACAATGGGAGAGTCGACGCCGTGTCTAT
ACTGCGCGTCAAAGATCCCTGTTGCGACCTGGCGTGCGGCGGGGGGGAATGCACGTGCAG
GTGCGCCGGGGGCGAGTAGCCGTGCGGGTAGTCGTACACGAACCCGGCTGGAGTCTTATA
ACCATAGTCGTGGTAAGCGGGGTCAGTATAGTCATTGTTGTAATTGAAGTCGTCTAGTCT
GATGTTAGGTAGAGGTACCGGACCAGCCAGGGGAAGCCCTACCGGCGCCTTGGTGTCCGA
GCGATCAGAGCTCGTGTAATCCAGGTCGTAGCTGGCGTCGCTCTGCGGCAACTGAAGCTT
CAGGTCGCTGATGTTAGAGCTCCTGTCGCTCTCTTTGTACGCGTCTCCGGTCGCGACGGT
CACGTCCGGCTTCTCGTTCATTTGACTCTTCTTCCTTCTTCTCCTGTGGCAGACCACGAG
GAGAATTATGAAGGAGGAGAAGACGACGATGCCGGTCGTAACCCCGATGAGGATTATGTA
CAGTGGAAGGGTCTTTAAAGGCTTCAACATTATCGGTGCGTTTGCGTTACCGTATTCGTT
CGTAACGCTGCAGTTGTAAAGTCCAAAATGCCTTGACTGGCTAGCCTTGATCACCAAACT
AGATTTAACTAGTCCATCGGGCAATGATTCTTGCAGTATCGCGTAATTCGGATCCTGTAT
CACACTGATCTCCCGACCTTCGAAGAACCATTTGATGAAGTCTGGCTTGGGAACAGACTC
TGTCAGGCATTCAACTGTAACCGTCTCCCCTTCCGCGCCTATCTGAGTCCTATTCGAAAT
TATCTTTGGAGCTCCTTTAATAAAAACAGTAGCTTCACTCTCGATTTCTGGGTATCCGGT
GACACTCGCTTTGCAGATATATTTTCCTGCCGTTTCTTTGTTCACAACTATCTCCAAGTT
CGGGGATTTTCCTTTAACCCCGATCCTGCCAGGCTCGTTCAGAAGCCACCTGATCGCCGG
CTTCGGCTGCCCATCAACGTCACAGCTAAGGGTCACAATCGAGCCGATATCCGCCTCGAC
GTCATGCAGATGATTGCGGAAAATTGGAGGATATGCAACGTTCAGTGTAACTTTTGCCGA
GCTCGTGCCCACAGTATTGCTGATTTCGCATCTCACTTCAGCCTTGTTATGTTTCCTTGT
GACGTTGAAAATAATCATCTCGTCAGTGTAGTCTCCTATGACCGGGTTGTTGTTGATGTA
CCACCTGTGGGCCCGGGGGGGAGGATTCGATTCGGAGCTACACCGTATCCTTGCTTCATT
ACCCTCCGGTATCTTACCGTCGATCACGCCAGACCTGAACGATATATTCACTTTCGGGAC
GTATTTCACCTCAAAATGTATCGTAGCCATCCTCGGCGCTCTGTCAGCTGTGTTCTGGGC
TTGGCAGGTGAATGTCTGGTTGTGGTACGCCTTGCTCGGGTTCAACCGCAAAACCGACCT
TGTTTTGTATCTTTGTCCATCTGCCATCAACTCCAATTTACTCTTCACGTTCTTCTTCAC
CACAGCTTGGTTACCGTCCAGCCAAGTTATCTCGGCAGCCGGTTTTCCACCTACGGATTC
GCATTCGATATCAAGAGATTGACCTTCCGTTGCTTCTACGAAGGCACCTTGAATTATCCT
CGGAGGCTCAGGAGCTACTAGGACTGTCAGTTTTGCGTACCGCGATCGGATCGCCGGCTC
TCCATTTAGCCCGCCACTAACTTGGCATTGGTACCTTCCGTCATCTTCTAAAGTAACGTC
TCGTATATCGAGGGAGAAATCTTCCTCGTCGCTTCCGATCATGGAGTATCTGTCATAACC
GCTCAGGTTCCGGTGTGTGCCGAGCCCGAAGTCGTCTTTCGTCCACTGAAGCGCCCCAGC
CTTGTTCTCCACTCGACAGGGCAGAGTGACTCGCGATCCCACTATCGCACTCTGATCTTG
CGGCTCCATGGCGAATCTCTGTTCCTGGTAACCATGACAACCGACAACGCAGACAATAAA
AAGCAGGATCCGTATCCCGGCATCCGACGTCCATATCCGTTTCCCTCCCGCCACCGTTCT
AAAATTAAATCTCGCACTCGGGATGCGCGCCCGCAACTTTAAATGCTGTTTATTTCGGGA
GTAGCTTTTGTCTGCCGCCATGTCAGTTTGTCTCGATGGGGCATGTTTCTGAAAGCTCGA
GTGAAGCTTTCCTCATTTCCTTGATTTTCGTATGAATACTTCGGTAATAAAACTCTTCTC
AATCTCGCGCCAAAACAAAACAACGGCAACAAAATCCAGAAATTTTGATCACAATCACCA
CTCAAGTCTAAAGTAATTCCATATTTGAATTAAACGAAACACCAAAAAAGAACAGTCAAC
TCGCGATTGTACATTCTCTTACGGAGTTTTTATTGTGCTACGCGTAAATGGCGGGTGACG
TATCTAACGTGCGACGGGCCG
(2781 bp)

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