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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13544_c0_seq2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0031297 P replication fork processing
GO:0031933 C obsolete telomeric heterochromatin
GO:0032206 P positive regulation of telomere maintenance
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070603 C SWI/SNF superfamily-type complex
GO:0072711 P cellular response to hydroxyurea
GO:1901581 P negative regulation of telomeric RNA transcription from RNA pol II promoter
Transcript
Level		FPKM:9.07 TPM:9.13
ORF EntryO_BomoSK14498_complete:A_BomoSK_comp13544_c0_seq2
Sequence
(Nucleotide)
GACCAATTTACCAAAATGGTGGAGTTTTGGTGTCGTCTAACTCTGTAAAATTACAGCATT
GATATCCTTGTTTAGCCTAGATGATTAAGTTTTATTACAAACGCTGTCAAAATATAAACA
CTTTTATATTTTGCTAATGAGGATACCTAATGACCTTGGTACAACAATGAGTGAAATTAT
TAAAAGTGAAGGGGCTTGTCCTGCACCAGAAAAGCCGGCTTCTTCGGATGAGAATGTACA
ATTCCCGCCTTTACCTGAACCAACTGATGAAGATTTTCAGGATGATCTTAACGAAGAAGA
AAAAGAATATATCAAAACTAAATTTGCGGACTTGAACACTATTACTTCTCAACGACTACA
TTGTACAGCTTGTGATCGTCATCTCGGTTCTTCGTCACGTAATTTATCTCGTGTGAAGAT
TCATCCTTTACTACGAACACTAGTGTGTCAGACATGTCACATCTTTTACAACAGTGGAGA
GTTTGAGAAAGGTGATGATGGATCTGAACTTTACTGTCGATGGTGTGGCCAAGGAGGACA
AGTATTCTGTTGTTCTGACTGTCCTCATGTTTTTTGTGCGAAATGTATTAAACGGAATTT
TGGACAATCAAAAATATTAGAAATTAAATGTGTTGATGATTGGAAATGTTTCAAGTGCAA
TCCTGAATGCTTAAAACACCTGCGTGCTGTATGTTGGGCTTTGTTTCAATATTGTAAAGC
AAGGATTGAAATTGCTACTTATACTGTGGACACTCAAATCAGAGAACTTTTGACGAAACA
ATGTGCTGCTGATGAATCTTTATGTTGTAAGAATAAAAGTAAAAGAAGTGAAAAATTGGA
TCCTGTTAAGAAAAAAGAAGAAAATGGCCCTAAAAAACAAACACCTGTACCCATAATATC
AAAAATTCCTCCTACTATACAGGTGAAAAAATTTGCATCAATAAACTTGGATGAAACACC
AAAGCAAGAAAAAAAACCTATAAAGAGACCAATAAGTCCTAAGAATAAACCAGTTATTGT
TAAAAATCCAATTCCAATAGCTACATCAGTTACAAGACTTTTGCATCCATTAAATATTGG
ACCTCCAATGAAGAAGTTGAGGATTGCAAGTCCAATGATGGGCACCATTAGATATGTGAA
TGATACCAGAATGCAGTCTTACCAACGATTAAGGCCTAAAGCTCCCATCAATATAAACAA
TTTCAATGGTTTTAAAAACACAAATCCAATATTCAATCCGATCAGTACAAATTCTTTTCA
CAATAGCATGGAAAACATGGTCGCCAATGACAACATCAACTTATCTTTGGATAATTTGAC
TCAGGGCTTGGACATGTCAGCAGCTGCCGCTCTACTGTCAGCAAATAATTCTCAAAATGA
TGATGTTGTTTGTACACCGGATCTTCCTATGGAATCTTTGAATGAGGTTAATGAAGATAA
CGACGATGACGTCGAATGTATAACTCCTGGACCTTCAGAGGCACCCAAAACATACAAATT
TCAGCATCCCCCACCTCTAGTGCCTTGCGGGAATAATAGTGCAGTGTCTTTATCGTCAGA
TAATATAATTCAAATGACCGAAAACGACGTCACAGTGAATGCGTTAACAGGCGGCTTGAA
GTTTCGGGTTGACCCTCAAACTTTGTCTTCAAATAAAATGTACAGGTTACCGGATGGCCG
CGTGTTTGCGATAAACATAAATCCAAAAATGCCCGGTGGCTATTCCGCAACTATTGTAGC
TGTAACTGATAATACTAATAAAGCCACACAAAGTAAAGGTACCACATTTGCCGCTAAATT
GAGTTCCGTTTCGACTCCGCAATGCTCTTCCCCTGTTACGCCAAAAGCACGAAGAAGCCA
ACGTCGATCTTCGTCATCAAAACGTAGTTCTACCAAATCTAAAACAACTCGCCAGTCGTC
GAGGAAAAGTAGCAGAATGTGTGATTTGAATGTTCCGGTAGAATGGTACAGATATAATCT
TATAGACGCAGTTGATGCCTTAGAATACTCATTAAACAGACTACAAAAATTAAAAAAGGA
AGCCACAACTATGTATCTTCGAACTAGGACTATTAGCGAAATGAAGAATCTCCATAAAAC
GTTAGATAGATTATTGACAACGTCATCAAAAAGATTTGGTGAAATCAAAGATAATCTAAG
CAATGAGTTGAAACAGTTTATTTTGAGAAAAACAGATAACCAGCCCGCAAATAGTGAAGA
CGACGACGTTGAAATTTTATCTAATGCTGAAAATGATGATCCCATATTCATAGATGAAAA
TTCTGTGGAGTCAAATACAAATTATAATGAAAATCAAGAGGTCGATTTGACTGGGCCCGG
CAGTAGTGAACATAATGAAACTGGCGAGAAGGAGGACGATTATTCTAGAATGAATGACGA
AACTCTAATCATACCAGACCAAGAAAATGAAAGCATTACGAGTATTAATGAAAATGGCCA
GAATATAGAAAATAACTCATCTGTTATTGGAGAAGGAGAAACGAGTTTGAAATGTGTTGA
AGCCCTGATAGAAACAAACACTACAAACAGTGAAAATAATTCAGTTGATGATTTCAACTT
AGAAAATAAGTGCATGGAAAATGAAAAACCTCTAAAAACATTAGAAAGTATAACTGAAAA
TAATGCGACTACGGGAAATGATAATCGTAATGAATCTAATGAAAGTAACACTGATCTGAC
TGAGGGTTCAGAAGACAATATCGCTTCTAAAAACCTTAACAGCGAAGCGACGGTCGAAAC
CAGTTTATCGAATGACACACTCAACTTGGAAAGCGATAAAGTACAGGATTCAGAAATAAG
CGAGGAATTGATTGAGTCTTTGTTAAAGGACGATAGCTCTACAAACTGTAAAGATTAGAA
CATAAATAATCCTATCTGGTTATTGTATTCAGAGCTTCTTTTACAATTTTGATGGCCATC
TAAGAGCAAATGAAAAATCGATTCAGCTAATGGATAAATTTATTAATAGACTGCTCCTTT
AGTATATTGTAATTAGTGGGACACTATAATATGTGCTAGTTATAATTACGTCAAGTAAGC
AACTATTTTTAGGTTAAGAGCAGATGTTTTTTTTGTACCGGTTTTCTAATCTGAAAACTA
TTTACATGAGTTCGTAATTTGATCATCGAATATCAAGATATGTATTTTCAAACTTAATAA
ATAATAACATTGTTAAATATTACACCAGTAATATCAAAAATTCAAAAAAACAAATGTGAA
CTATTTTAGATTATTTGCTATGACTTGTAATAAAAGTACATATTTATGTTAATATTTCTG
TCAATGATTCATACACATAATTCAAGGCACAGAAATCAAGGATTTTTTTGTCGTTGTATC
GATAAACCATAAACAAGTGTGATAAGCCCTTAAATAATAAGAAAAACACATTTACATGTT
ACAGTCAATTTCATTTACTAAATAATTTCACTCAATACTGATAATTCAAGGTATCCAACT
GCACTAAAATATATAGAAAATTATAATTTCATATAAAATTTAAATTCACTACTCTGGGAT
CCGATTTTTTCCTAATAATTTCTTTATGGGCATTTAGGACGAAAAGATCTATTCGAGTGT
GAATCATAGTGAATATGCGGTAAATAAAAGACCTACTAAGCAAAAATGAATTTGAATCAT
ATAAAATATTTCGTTAAATTTAAACAAAATAGGTATATTTAAATTGAATTGGACCCGCTA
AACAAAAAGTAGTCGACACGCAAAATCGCATTTTATTTATTAAAATTCAAACTGATGTAG
ACGTGAACGCATTCCACTACTGGGAACAAAACACAATCCTCTTGGAAGTTATAGGACAGG
ACGATCAAGTAAGTCGAAGGCATGCTTGAATGAATTGGCTTGATTCGACATTCAAGCAGT
TACACGAACCTCTATTTCAGTCGCATCAAACTAATCCAGCCCTGTCAAAACATCAGCTAC
AAACAAAATCTCTATAAATATAAATATGTTCACTACTCAACTACCCATAGACACAGCCCA
(4020 bp)

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