SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13503_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		prolyl_4-hydroxylase_alpha_subunit_precursor_[Bombyx_mori]
Ontology
GO:0004656 F procollagen-proline 4-dioxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0016491 F oxidoreductase activity
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019511 P peptidyl-proline hydroxylation
GO:0031418 F L-ascorbic acid binding
GO:0031545 F peptidyl-proline 4-dioxygenase activity
GO:0043412 P macromolecule modification
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:15.85 TPM:15.95
ORF EntryO_BomoSK14339_complete:A_BomoSK_comp13503_c0_seq2
Sequence
(Nucleotide)
GTTTATTTCTTATAAAGATAGTCGACCCTGATGGTACATTTATTAAAATTAATAAAATAA
ATTTGAACTTTTTATATCAATTTTTAAATGCATTACAATGGCTTTGTCTTAACTAATAAT
ATAATATGTACTTTCATTTTATTATTATTTTCGTCATGTAATTCACTTAAAACTACAAAT
ATACTAATGGTACAAGAGTCTCTTGATTATGCACAACTAAGTTTTAATTATAAAAATAAA
TCAAAAAGCAAGATAGAAGATGACAAACATGTAGCACGAATGTATAATGATTAAAGTTAA
CATTTAAAAAAATCATGACTAACATTATGGACATACAAGGATGAAGCGGTGTCAATAATG
TGTACGTATTAGTAAATGTTACTAACAATACTAACACGTAGTACTAATACGTACAATACA
TACACAAGTATATAGCCTTAATTGACGTATAATCTTTCAAAGTACATGCAAAATTTTGAT
TAGTCACTGGTCTTTAGAGGTCTTTTGAGGGTTTTCTTTGCTATATTTCTTCATGCATTT
TCTAGTTATAGGAACAGTTTTTAAACTTATATTTGATAATTTTAAAGTACTGGTGTAGAG
GCAAATCATATTTTAAGAATATGAGTGATTTTCTTTTAAGAATGTATTCCAATTTACACT
CACTATTTACATTAAGTTTATATAAAATTAATTTATAATCATTAGTTAGAAGCTTTTATA
TTCGTCAGTATATAATGGCAAATAAACTTATCCAAGTAAATATTTGTTCAATATTATTAT
TAGTCTTGGTTTTTTTCCTCTACCCGTTCAAAACGGAACGCGCTATGGAATGCTTAGTGA
TAGAAATACGCAGGATGTAATATAGTAATAGCAAGTACCTTTTGGTAGGGACTTCCAATA
CGCCCAATCACTAGTAAAATTAAGACAGGAAGACTGGGTGGATATGGTGATCGTGAAAAT
TATATTTCTACTACGGATGAGTTAAGGTAATATAATGGCAGGAACTTACCCGCATTTCTT
GATCAATAGCAGACAGACTTGCAAAAGTTAAGAATTTATCTAAAAATGTAATCTGTTTTC
TTATGGTTAAAACTTGACATGGATGCGCTATGAACATAATCACTATTTTATTTGTCTTAT
TCTATATAATTCTGATGAATATATTAATTATTTTTGCAACAGAGATTCAGAGAAAGAGCC
TCCAGTAGATATGTATTATAAATTAATTACTTACGTTAAAACAAACTTTACGAATAATAA
ATTATTTAAAAAAAAAAAATGTCTGTCATTAATTAGGCAAGCATTAGTCGATCATCGTGT
TTACATTCTAAATAAAAAATAATAATAATATTAAATTGTACATTTTGTTTCAGCGCATTA
TAATCATGTATCTGTAAGTATACTGTATCATTTTTCTTTTTAGTTGTTTTTTCAGCATTA
CCATAACAATTAAAACTATTCATGAAAGCTATGCCTGTTTTAAATAAAGTACTTGGGACT
TCTTGAACTATTAGGGCATGATACCACTAAGCCACGAGCCATCGAGCCACGATGGTTTAT
TCTAAGATATCACTATAATATATAATATGTTAAAATATATTAGTGTTTCATTGCAACTTA
TTTATTATTTAACATTTTTTTTATTAGATATGTTTATTTGTGAATTTGTTCGCAACAATA
GATGGTTTTTTGTGTGTGCCTGGTGTGAGTTTACTGTTAATATTTTACAATCAAACAAAT
CAACGTTAACTTAAACTATACGTTCTAAATAGGGGAAAGTAAAGAAATTGGAACAATTTA
ATAAATATATTAAAAGTATAGTATAAATTGCACTCAAATTATTGGTTATTTAAAACATCT
CCTAAAAGTTAGTTGGCGTAATTTTCTTGGCGTCTTTCATAATGAGAATCTTCTTTCTTG
ACCCATAACTAATTAAAATTATGCATTCTAGTCGATTATGCTTGTGGTTATTCGTAAAAT
CGCACGAGACACAGAAGTCGAATACGTGTACTACACAGACCCAACATTCTATTATACTAT
GTAATATTTAATCTATTTTATTTAAAAAAAAATGCACTATACCGAACAATTTATGATCAG
TTCCGTTCGGTCACACGTTGCTCGGAGTCTACCTGGATGTCTTCGGCACTGGACGAGGAA
TCTTGCGGATGATGCCCTCCTCCTGGTACTCAAGGTCGCAGGGCCTCAACAGCTCTTGCC
CGCCTTGATGTATCCATTTATTTGACACCCACTTGGATCCCCTGAGCACGGGGCAGGCGG
CATGCCTGGTGGCGAGGTCTCCTTCGCCCGACGCGTGCAGGTTCAACCAGAACGCCGCAG
CTCGTTTTATTGGAAACAAACTGAGTCCAAGTTCGGTGAACACTGTAGCGCCGCCCTGCG
CCACGTCAGACATGTAGAAGAGGACGGTGGCTATTCTGTTGCCGCCGAATTTCGTGAATG
GATTCTCACGTTTCCTAGCGAAGTCGAAGTGCGGTTCGTAGTGTCCCCCTATGCCGTAGT
TGACGACCTGAAGCTCCTCGGCGTGCAGCATGCTGAGCCCGGTCATGTCGGTGACGCGCT
GCGTGATGCGCGCTATGACCGGAGACTCCTCGTCGCGGAGCCACGACGACTTGCTGATGC
GGTAATGGGCCGGTGTCAGCTCACCAGTTTTAGGGTCGTGAACGACAGCCCGTTTGAACC
TCGGCTTTGCTCGTTTTTTGATGAACTCAATCTCGTCGTCGGTCATCACTTCGTGGAACA
TAAATATGTCGGGCTTCACGTACATCTGCTCCACTTTGATTGGGGCCAACTTTAAAAACG
GATGCGTGTCGGTGACGTACCAACATTTCAACCTCTTAGTAATCTCATGGGGTATTTCCA
TTTCTCCCCGACACAGCGATTCGTAAACTTTGCGTTCCTTTGCGTACTCTGATAATTCGT
AATCTTGACCATCTTCTTCTTCAGGCTCATCCGAGGTTTCCCCACGTTGTTGCTTCTTTA
ATTCGGCCTCTTGTTCGGCTATCGTCTTCTGATAGTGCGGTATGTTGCCCCGCGCTCGTA
CGTGCTTCGGATCGACGGACAGAAGTCTCTGAGTCCATTCCAGAGCGGTTTTGACGTCTC
CGTTTAAATAATATGCGAATCCTATATATTCCAAGATATCGACTTCGGTGAACGGGTACA
TGACGTTTTCATCTTTATATTTCCTTAGCGCTTCTTTCATCCAGGCCAAGGCGTTTGTGT
AATCTTTATCGTTGTATAGAGTCCGGCCGAGTTCGTAACAATCGCTCGCCGTCATAGGAG
TACTGTATGAAACTCCATTCAATATACCCTCGGCTAGATCGTGTACATTTAAATAGTAGG
TTTCCTGCAACCGAGTCAGCGCCTGAGCTGCTCCCGTCAGATCTTCCAATGACGGATATT
TCACGTCCACGTGGTTCATTGTGACGTTCTTTATGTATTCTGTTCCAATTTTAATGCTAT
CCTCTATAAAATCAAGGTCGGCCGTTAATCTTTTTATCAACGTGAAAGCATTGATCGGGT
TGCCGAGGTAGTTAGGGATGTCATCCATAGCCCTTTCGTGTTCCCTTTTATATAAATTCA
AGTGTTTCTTCAAAGTGAAAAGTCTCCTCTCTTCTTTTTGCAGGTAATCATCTAAATCGT
CTATGATCCTCTTGTGGGTTTCCAGTAGCGGTTCAACATCCGTTATGGCTGTGAATAGCT
CTGCTTTGGCCCAAGTAAAGAAAAACAGAAGCAAAAAAGCTATCGCTCTTACTGTTTCCA
TTTTTGCAGAAATAAATATGAAAACGATTCTAGAACTTGCAGATCAGCAAATTGTTTTAC
AGACAAACGTACATCATTAAGGATTATTAGAAAAACGTATTGCAGTTTAACCTCATTCAC
CACAAATTGAATTGCAATCAATTCACAATTATAAACGTTAAATAAAGCGACAATCTGGCA
AAGATACGTGCGTCCACGCAGCCCGACGTCG
(3991 bp)

- SilkBase 1999-2023 -