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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13499_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		CRM1_[Spodoptera_frugiperda]
Ontology
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005642 C annulate lamellae
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0010824 P regulation of centrosome duplication
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0042176 P regulation of protein catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0046825 P regulation of protein export from nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:17.87 TPM:17.98
ORF EntryO_BomoSK14314_complete:A_BomoSK_comp13499_c0_seq1
Sequence
(Nucleotide)
CATGAAAACAACGGATTAGTATGTATGGTAGTGCGTTAGATTGATTGCGCCGCAAATTAT
TTTCTCGGTGTTGTATAAGGTGAGGAATGAATGTGGATTAATCAAAATAATTTTGATTTT
GGAAAAAAGGGAACAAATTAACTAAATAAATATATTTTACCAGAATGGCAACCTTAGAAC
AACAGGCATCTAAACTTTTGGATTTCAATCAAAAATTGGACATCAATTTATTGGACAACA
TTGTTGGCTGTTTATATTCTGCTGTTGGGGATCAACAACGTGTTGCTCAGGATATACTGA
CTGCTTTGAAGGAACATCCTGATGCTTGGACTCGTGTTGATACAATACTTGAATATTCTC
AAAATCAAGAAACTAAATATTATGCATTACAAATATTAGAACAAGTAATACTAACGAGAT
GGAAAATATTACCAAGAAATCAGTGTGAGGGTATAAAAAAATATATAGTTGGCCTTATCA
TTAAAAATTCATCAGATCCTGTTACGATGGAAAGCAACAAAGTTTATTTGAAAAAACTAA
ACATGATCCTTATTCAAGTTCTGAAAAGAGAATGGCCCCATAATTGGGAAACTTTTATCA
GTGACATTGTGGGTGCCTCAAAGACGAATGAAAGTCTCTGTCAAAACAATATGGAAATAT
TCAAGTTGTTGAGTGAAGAAGTATTTATGTTTAGTACAGGCCAGCTCACACAAACAAAAG
CTAAGCATCTAAAAGATACAATGTGTTCAGAATTCAGTCAAATCTTTCAGCTATGCCAAT
TTGTCTTGGAAAATTCACAAAATGCACCTTTAGTTGGAGTGACCTTAGACACTCTTTTGA
GATTTTTAAATTGGATTCCACTTGGTTATATTTTCGAAATGAAATTGATAAGCACATTGA
TATTTAAGTTTCTGAACGTGCCGATGTTTAGGAATGTAACATTGAGCTGTCTTACTGAAA
TTGCCGGTGTCACAGTCAGCAATTATGATCAGCAGTTTGTTTATTTGTTTGTACAAACTA
TGGAACAACTTGAAGTTATGCTTCCTCTAACTACAAACATACGTGAAGCATATGTAGCTG
GTCGAGATCAGGAACAAGTTTTTATTCAAAATCTTGCACTTTTCTTATGCACATATCTAA
AAGAGCATGGTCCGCTCATAGAAAAGAGTGGATTAACAAACACTTTAATGAATGGTTTGA
GGTATCTTGTCTTAATATCAGAGGTAGAAGATGTAGAAATTTTCAAAATTTGTCTTGAAT
ATTGGAATGCTCTTGCTGCTGATTTGTACAAAATTGCGCCATGTTCGTCAAACTTGTACC
ATTTGGGTAAAAGTGGAGGCCGAAAAGCTTTGTATGCTGATGTCTTGAGCAGTGTTCGGT
ATATTATGATCTCGAGAATGGCAAAACCAGAAGAGGTGTTAGTTGTTGAAAATGAAAATG
GTGAAGTTGTGAGAGAATTTATGAAGGACACAGACTCCATTAATTTGTATAAAAATATGA
GAGAAACATTAGTTTACTTGACACATTTAGACTATTTAGATACTGAACGTATTATGACAG
AGAAATTACAAAATCAAGTAAATGGTACTGAGTGGTCATGGAAGAACTTGAACACATTAT
GTTGGGCAATTGGATCTATTTCTGGAGCTCTATCTGAGGATGATGAAAAGAGATTTTTGG
TTATTGTGATTAAAGAGCTTCTAGGTCTCTGTGAACAGAAAAAGGGAAAAGATAACAAAG
CTATAATTGCTAGTAACATAATGTATGTCGTAGGACAATACCCACGCTTTCTTCGTGCAC
ATTGGAAATTTTTAAAAACCGTTGTCAATAAACTTTTTGAATTCATGCATGAAACACATG
ATGGTGTCCAAGACATGGCGTGTGATACATTCATAAAAATTGCTATAAAATGCCGTCGAC
ATTTTGTCACTACTCAAGTTGGAGAAGCCTGTCCTTTTATTGAAGAAATATTGGGCACCA
TTAGTACTATAATTTGTGATTTACAAACATTGCAAGTTCACACTTTTTATGAAGCTGTTG
GATACATGATCAGTGCCCAAGTAGATCAAGTAGCCCAAGAACTTTTAATTGAAAAATACA
TGCTTCTGCCTAATCAAGTTTGGGATGATATTATATCTCAAGCTTCTCGTAATGTTGAAA
TCTTGAAAGACCCTGAAGCTGTTAAACAACTTGTAAGTATACTGAAAACAAATGTGCGTG
CATGTCGTGCACTAGCACACCCATATGTTGTGCAATTAGGAAGGATATACCTTGACATGC
TTAATGTTTACAAAGTAATGTCTGAAAATATAAGTCAAGCCATAGCTTTAAATGGCGTAG
CAGTTACTAAACAACCTCTCATTAAGAATATGAGAATAATAAAAAAGGAAACTTTGAACC
TTATTTCAAGTTGGGTTACACGCTCGATTGATAACAGTATGGTTTTGGAAAACTTTATTC
CACCTCTTCTCGATGCTGTGCTTTTGGATTACCAAAGGACTGCTGTTCCTGAAGCTCGTG
AGCCTGAAGTACTGTCTTGCATGGCAGCAATCGTGCACAGACTTGAAGGACATATAACTT
CTGAAGTACCAAAAATATTTGATGCAGTCTTTGAATGTACTCTGGAAATGATTAACAAAG
ACTTTGAAGAGTATCCAGAACATAGAACAGAATTTTTCTTATTACTGCAGGCGGTCAATA
CAAACTGTTTCAAAGCATTTTTGAGCATACCACCAGCACAATTCAAGTTGGTTTTAGATT
CCATAATCTGGGCATTTAAACATACAATGAGGAATGTGGCAGATACCGGTTTACAAATAT
TGTACCGACTGTTGTTAAATGTTGAGGAACATCCACAGGCAGCACAGAGTTTTTACAGAA
CCTACCTTTGTGACATTTTGGAGCATGTCTTCAGTGTAGTCACTGATACATCACATGGTG
CAGGACTCACTATGCACGCTACAATCCTGGCTCACATTTTCTCATTGGTAGAGGCTGGCC
GAGTTACTGTACCACTTGGACCCACACCAGACAATGTTCTTTATATTCAGGAATATATCG
CAAATCTCTTGAAAACAGCATTTTCACACTTAACTGATAACCAAATTAAAATTACTGTAC
AAGGCCTGTTCAACCTGAATCAAGATATACCTGCTTTCAAGGATCATCTCAGAGACTTCT
TAGTTCAAATTAGAGAGTACACTGGTGAAGATGATAGCGATTTGTACTTGGAAGAGCGTT
TGTTTGTATTACGTCAGGCACAAGAAGATAAGAGAACAGTGCAGTTGTCAGTGCCCGGCA
TTCTGAACCCTCATGAATTGCCTGAAGAGATGCAAGATTAATTAGAGATTACTGTAAACT
CAGAAAATGGCAACAGTGTGCATAGATTAGATAATTTTATTCAGATAACTACAGTTTAAG
GTGACATTAGGAAATTAGTGACATAAGCTGTAATCAATGGTGGTTTGTATTAGCTTCAAA
ATTAATATTTTATAAAGTCTGATAGAGACAATCATTGGAAATTCATGTTTTTCCATAATA
GTAAAATAAAGTAAATAATATAATAAATAGTAAAATAAGTACTTAATAAAATGGTTATGA
ACTACTTGAAACAACTAACATTCAGTTAATTTGGGCAATTGTATTTTTTAATTGCTTGTT
TCTTGCTTTGAGTGAGCCCATGTTTTTAATCAAAAAACTTATGCATTTTTTTTCTTTAGT
TTTGCGCCTATAAGGTTTTCGTGTCAGACATAGATTAAGATATGTTCATACAATATTCAG
TTGGGTTTTTCGGTATTAATGTATCTGACTGTATTAACACTAGTTTAGTAATTATACTGT
GTCCTGTTGCCATTGATTTATTGTCTATGTCTTGGGCTCTTAAAATATTACCATTTATGA
TAGTTTGTATAAGAGATTGCTAGGTTCCGATGCAAGAAGATGAATGCAAGTGAATTTAAA
CGACAGCAGAACATGATTTAGTGAGTATATTTTAATAGCTTAAGACATTTTCTGAGCCGT
ACATATTTATAGATTGTAAACTGCATCAATTTACATTGTTAGAAATTATAGAAAATCTGT
TTTTAAGTAATCTTCAAATGTAAGTAATGCTAATCTCTGTGATGTAACCAGTGTCAGATG
TCAATATGTGCGCTGCAGAATCGAAGTATTACATGTAGATTCTAGGAAAACACAATGGAT
CGATGTTAGTAATATTTTTGTTTTGTTTAATGTTGTAATAACCAATTTCATTGTATGTTG
GAAATTAAATCACGGGATGATTTCCTGATGAATTTTGGGTCCGATTAACTCAAGTCTTTC
AATTTTGTGTTTGGA
(4335 bp)

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