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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp13498_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_histone_chaperone_asf1_[Papilio_polytes]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006325 P chromatin organization
GO:0006333 P chromatin assembly or disassembly
GO:0006334 P nucleosome assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007517 P muscle organ development
GO:0016568 P chromatin organization
GO:0017053 C transcription repressor complex
GO:0033186 C CAF-1 complex
GO:0035059 C RCAF complex
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0048813 P dendrite morphogenesis
Transcript
Level		FPKM:6.65 TPM:6.69
ORF EntryO_BomoSK14309_complete:A_BomoSK_comp13498_c0_seq1
Sequence
(Nucleotide)
TTCACAAAAGACCGTCGCGGCGTTGTAGTCGACACATATTTTGGTCACGTGACCATTTCA
ACCGCCAAAATAATTTGTCATTTTTCACCGATCTTCAGCGAGAATTAAACAGTGTCTGGA
CTTTTTAAGATCAAAAACATTATTAAAAGTGAAACGTGTGTGTGGTTATAGTTAAAAAAA
GAATTAAAGAAAACCGAAACATGGCCAAAGTTCATATAACCAATGTAGTTGTATTAGACA
ATCCAAGCCCATTTCTCAATCCGTTTCAATTCGAGTTAACCTTTGAATGCATCGAAGAAC
TCAAAGAAGATTTGGAATGGAAGATGATTTACGTTGGTTCTGCGGAAACGGAAGAGCACG
ATCAAGTTTTAGACACAATTTACGTTGGACCCATCCCAGAGGGAAGACACATGTTCGTAT
TTCAAGCGCCACCACCGGACGTCACAAAAATACCGGAGAATGACGCTCTCGGAGTTACTG
TCGTATTATTAACGTGTTCGTATCGGGGACAGGAGTTCGTGAGAGTAGGCTATTTCATAA
ATAATGACTACAGTGAAAGCGAACCTGAATTACGAGAGAATACACCAGCTAAGCCTCAGT
TTGATAAAGTAGTGCGTAATATATTAGCTTCAGCGCCCCGTGTGACGCGGTTTAAGATAA
ACTGGGCAGAGCCTGATGCTGGTACGGCCATCGACGCTGGTGACAGCAATCTAGAAATTT
CTCATGCGCCCAGCAACGACTCTTACAGTGCTAGTTTTAATGCTGAGAGTCAGATAAGTG
GAATAGAGTTTCAAGGTAGTTTAAGCGGCTATGGAGACAATTCTAACTCAATAGCGCCAA
TGGAATGCTGAGATTATGTAACCAGATATAATAAGAAAGAAATATCATGGACCGTTTTCA
AGGCTTTGTTTGTACATAATAAAAAGATTGTAAATGCATGCACATTATTATGAAATCTAA
TGTGTGTAATGTTAAAACCACATGATTTTGTGAATGGAGAGAGTATTCTCGTACATTGAG
CGTACAATGGTATGATCTTGTTAAATTAAAATCTAGCGTTGACTAGTCGATGCCTTTTAA
AATAAATAAGAAATTTTACTAAAATTGAACACCATATCACAGTGTATAATAATAATGGTG
TTTATTAGTATTTGAATGTAAAACAAGCTTTATGGAATGATTAACGTAAGAAAACCTAAA
ACAAAATAATACAATGTCTAAACTGTACTTAGAATAAATGATATATGAAGTGTCCTTATA
AATATATATAGTACATAAATATTTTGATATATGAGGATGGGATAATAAGTGTTAAATGTT
ATCCCTTACGTAAACAAAGTCGCACGCAGTGTCGTGATTCCTTAATATATCAAAGATAAT
TAAATTTGATTAATATATTTCGGATTGTATATTTTGAAAACAATGAACTATATATCTGGA
TCTTGATAAAATCTATGGTTGTTCCGAAAAGTCTCGCATTAATGATCTATGAAGTTGACT
AATATTTATACATAAGTTAGTAAATGGTATACTTTACTTAACGTTTTTTGTGCCGTTTAA
ATTTGTAATAGACTATTAACACCCTATATAATGCAATGCAGTGGTGTCACAATGCACTGG
CCGACACGATCTTTAAGCACGAAGGTCCCTTCAGAAATGTTTCCACTTCTGTTCTTACTT
AGACTGTGCCTATCACTTATATTTCTAACATTAAACTAACTACCTAATACACTCTGCCTC
TGTAATTATGAAATTGACCAAAATTTGCCCATTTCATTATTATATGATAATTGAGTTTCT
TTTAATATTAAAACATATATAACTGCCTAAGTATGTATACAATCTCTCAAGTTAGGGTTG
TCAAATAATATAAAAATTTCAGTATTCTACAAATATTTATCTTAATGTAAATTTAAGTTT
AGCATAATTGAAATATGAAGTCTATTCTTGATGTATACGCACTGTTCAAAACAAAACAAT
TCCTATACATCACTGAAAGACTACACACTGCTATGTATTTGTTGTGAAAGTTTTTATTAC
AAATTTAACTGTTTAAACAAGTTTTCCTGCCATTGATACTTGCTACTATGAGTACCCTCA
CCAGTGGAGACCACTGGTGAGGGCCCTAAGTACCAGCGGGGTGCCTTAGGACAACAACAA
CAACAACCCTGGGTGTTCACTCTGGACACTCTCCAATTTTAATAATAAGATTATACGAGT
TACTGACTTAATATGTTACAATAGAGAAACAAAGAAGAGAATTAAAAAGAAATAGAATGA
ATCTTGTGGTTTTAACATTTGTTAAATTAAAGTCATTTCAAATTTCTCGATAACGTAAAA
GCAAACGGTTGTATACAATGACTGCTGAAGAATAAATATAAGTTTGGAGTGTTTCTTAAA
TGTATATCAAGTTTTTATTTCATTTGCCGCAGTGAAGTACTGGCTTAATGTGTCAGCTAG
GTTACCATTTGATCATGAGACCTGAAGCCACAGTGTCTCATTTGACTCTCATTAAAGTGA
GGAACGTAGTGTTTAATATTGGAAGTTATTTAATTAGGATTATGTTGTGAGGATATTTTT
ACTAAATGATTACATGAATATAATTTTACCCTTGCAGTTTTTTTTTATTGCTAATATTAC
TGGAGGCGAAGCATGCAGCCCAGCTGGTGTTAAGTGGTT
(2679 bp)

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